Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0596 Ceratophyllum demersum HOM05D001447 ORTHO05D005923 3.7e-82 308.1 156 100.0
Nn2g15058 Nelumbo nucifera HOM05D001447 ORTHO05D005923 3.8e-26 122.1 101 59.4
CANSAT54G2333 Cannabis sativa HOM05D001447 ORTHO05D005923 3.9e-23 112.1 95 56.8
TAR623G0977 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.9e-23 112.1 93 61.3
TAR623G1061 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.9e-23 112.1 93 61.3
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 8.8e-23 110.9 93 59.1
MBI13_g04766_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D005923 2.0e-22 109.8 116 50.9
Duzib168G0657 Durio zibethinus HOM05D001447 ORTHO05D005923 2.6e-22 109.4 93 54.8
TWI14G1124 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 2.6e-22 109.4 93 55.9
Cpa.g.sc84.6 Carica papaya HOM05D001447 ORTHO05D005923 3.3e-22 109.0 93 51.6
Os06g0245600 Oryza sativa ssp. japonica HOM05D001447 ORTHO05D005923 3.3e-22 109.0 95 49.5
TWI23G0345 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 3.3e-22 109.0 93 57.0
CiPaw.13G153600 Carya illinoinensis HOM05D001447 ORTHO05D005923 4.4e-22 108.6 93 53.8
Gohir.A09G111500 Gossypium hirsutum HOM05D001447 ORTHO05D005923 4.4e-22 108.6 101 51.5
Gohir.D09G108100 Gossypium hirsutum HOM05D001447 ORTHO05D005923 4.4e-22 108.6 101 51.5
Gorai.006G125800 Gossypium raimondii HOM05D001447 ORTHO05D005923 4.4e-22 108.6 101 51.5
Thecc.09G241000 Theobroma cacao HOM05D001447 ORTHO05D005923 5.7e-22 108.2 101 51.5
COL.COLO4_36479 Corchorus olitorius HOM05D001447 ORTHO05D005923 1.3e-21 107.1 101 50.5
VMungo1383G2912 Vigna mungo HOM05D001447 ORTHO05D005923 1.3e-21 107.1 154 38.3
Haze_23187 Corylus avellana HOM05D001447 ORTHO05D005923 1.7e-21 106.7 90 54.4
Phvul.008G074800 Phaseolus vulgaris HOM05D001447 ORTHO05D005923 1.7e-21 106.7 155 37.4
Manes.06G161200 Manihot esculenta HOM05D001447 ORTHO05D005923 3.7e-21 105.5 89 55.1
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 4.8e-21 105.1 90 54.4
Manes.09G003800 Manihot esculenta HOM05D001447 ORTHO05D005923 4.8e-21 105.1 95 51.6
Ciclev10006845m.g Citrus clementina HOM05D001447 ORTHO05D005923 6.3e-21 104.8 93 57.0
Medtr7g075050 Medicago truncatula HOM05D001447 ORTHO05D005923 6.3e-21 104.8 141 42.6
PSO170G2976 Papaver somniferum HOM05D001447 ORTHO05D005923 6.3e-21 104.8 92 52.2
Lalb_Chr20g0108071 Lupinus albus HOM05D001447 ORTHO05D005923 8.2e-21 104.4 93 53.8
PSO339G5991 Papaver somniferum HOM05D001447 ORTHO05D005923 8.2e-21 104.4 92 51.1
Zm00001eb128570 Zea mays HOM05D001447 ORTHO05D005923 8.2e-21 104.4 92 54.3
arahy.Tifrunner.gnm1.ann1.Q3UL2U Arachis hypogaea HOM05D001447 ORTHO05D005923 1.1e-20 104.0 93 53.8
arahy.Tifrunner.gnm1.ann1.QJKL08 Arachis hypogaea HOM05D001447 ORTHO05D005923 1.1e-20 104.0 93 53.8
Dinv36208 Davidia involucrata HOM05D001447 ORTHO05D005923 1.1e-20 104.0 143 39.9
Medtr8g059560 Medicago truncatula HOM05D001447 ORTHO05D005923 1.1e-20 104.0 141 42.6
Glyma.18G222500 Glycine max HOM05D001447 ORTHO05D005923 1.8e-20 103.2 160 39.4
Peaxi162Scf00394g00910 Petunia axillaris HOM05D001447 ORTHO05D005923 1.8e-20 103.2 93 49.5
HPP92_015725 Vanilla planifolia HOM05D001447 ORTHO05D005923 1.8e-20 103.2 90 52.2
Oeu038401.1 Olea europaea HOM05D001447 ORTHO05D005923 2.4e-20 102.8 101 47.5
Lalb_Chr17g0336631 Lupinus albus HOM05D001447 ORTHO05D005923 3.1e-20 102.4 136 42.6
RcHm_v2.0_Chr5g0051191 Rosa chinensis HOM05D001447 ORTHO05D005923 3.1e-20 102.4 93 51.6
TAR623G1057 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.1e-20 102.4 91 58.2
PSO384G1304 Papaver somniferum HOM05D001447 ORTHO05D005923 7.0e-20 101.3 92 50.0
Glyma.13G152406 Glycine max HOM05D001447 ORTHO05D005923 9.1e-20 100.9 100 50.0
LjContig00136g0008106 Lotus japonicus HOM05D001447 ORTHO05D005923 9.1e-20 100.9 93 51.6
Atru.chr3.2630 Acer truncatum HOM05D001447 ORTHO05D005923 1.2e-19 100.5 94 50.0
ATR0681G241 Amborella trichopoda HOM05D001447 ORTHO05D005923 1.2e-19 100.5 100 51.0
Migut.O00259 Erythranthe guttata HOM05D001447 ORTHO05D005923 1.2e-19 100.5 135 40.7
Prupe.4G257000 Prunus persica HOM05D001447 ORTHO05D005923 1.2e-19 100.5 93 50.5
DCAR_002089 Daucus carota HOM05D001447 ORTHO05D005923 2.0e-19 99.8 96 47.9
TPR.G26927 Trifolium pratense HOM05D001447 ORTHO05D005923 2.0e-19 99.8 140 44.3
GSVIVG01031554001 Vitis vinifera HOM05D001447 ORTHO05D005923 2.6e-19 99.4 152 43.4
AL3G33750 Arabidopsis lyrata HOM05D001447 ORTHO05D005923 3.5e-19 99.0 102 47.1
Thhalv10021184m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 4.5e-19 98.6 131 45.0
MSTRG.11555 Avicennia marina HOM05D001447 ORTHO05D005923 5.9e-19 98.2 121 42.1
Gohir.D05G073400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 5.9e-19 98.2 105 44.8
CAN.G625.44 Capsicum annuum HOM05D001447 ORTHO05D005923 7.7e-19 97.8 141 39.0
Glyma.09G267400 Glycine max HOM05D001447 ORTHO05D005923 1.0e-18 97.4 104 49.0
MD03G1170100 Malus domestica HOM05D001447 ORTHO05D005923 1.0e-18 97.4 93 47.3
Gorai.009G074300 Gossypium raimondii HOM05D001447 ORTHO05D005923 1.3e-18 97.1 140 39.3
Glyma.10G069400 Glycine max HOM05D001447 ORTHO05D005923 2.2e-18 96.3 158 38.6
Eucgr.J00732 Eucalyptus grandis HOM05D001447 ORTHO05D005923 2.9e-18 95.9 95 46.3
MD11G1187600 Malus domestica HOM05D001447 ORTHO05D005923 2.9e-18 95.9 93 46.2
Hund21995 Selenicereus undatus HOM05D001447 ORTHO05D005923 5.0e-18 95.1 95 50.5
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 6.5e-18 94.7 88 53.4
FAN25G1867 Fragaria x ananassa HOM05D001447 ORTHO05D005923 6.5e-18 94.7 153 36.6
AT3G20070 Arabidopsis thaliana HOM05D001447 ORTHO05D005923 8.5e-18 94.4 100 46.0
A05p29010 Brassica napus HOM05D001447 ORTHO05D005923 8.5e-18 94.4 105 49.5
C05p44410 Brassica napus HOM05D001447 ORTHO05D005923 8.5e-18 94.4 105 49.5
BolC5t33164H Brassica oleracea HOM05D001447 ORTHO05D005923 8.5e-18 94.4 105 49.5
BraA05t21783Z Brassica rapa HOM05D001447 ORTHO05D005923 8.5e-18 94.4 105 49.5
Hma1.2p1_1503F.1_g287490 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 8.5e-18 94.4 91 49.5
QL01p018064 Quercus lobata HOM05D001447 ORTHO05D005923 8.5e-18 94.4 93 52.7
Sc09g0000900 Simmondsia chinensis HOM05D001447 ORTHO05D005923 8.5e-18 94.4 201 32.8
BcaB06g26078 Brassica carinata HOM05D001447 ORTHO05D005923 1.4e-17 93.6 90 50.0
FvH4_3g28310 Fragaria vesca HOM05D001447 ORTHO05D005923 1.4e-17 93.6 153 36.6
FAN11G3154 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.4e-17 93.6 153 36.6
FAN21G0933 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.4e-17 93.6 152 36.8
Potri.009G049500 Populus trichocarpa HOM05D001447 ORTHO05D005923 1.4e-17 93.6 90 50.0
SalBow4G0828 Salvia bowleyana HOM05D001447 ORTHO05D005923 1.4e-17 93.6 139 40.3
VMungo0540G1247 Vigna mungo HOM05D001447 ORTHO05D003921 1.9e-17 93.2 158 38.0
Gohir.A05G070400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 2.5e-17 92.8 140 38.6
Hma1.2p1_1116F.1_g258880 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 2.5e-17 92.8 90 50.0
Actinidia16355 Actinidia chinensis HOM05D001447 ORTHO05D005923 4.2e-17 92.0 88 51.1
Aa31LG8G6860 Aethionema arabicum HOM05D001447 ORTHO05D005923 4.2e-17 92.0 103 45.6
FAN16G0976 Fragaria x ananassa HOM05D001447 ORTHO05D005923 4.2e-17 92.0 153 35.9
PGR119G0225 Punica granatum HOM05D001447 ORTHO05D005923 4.2e-17 92.0 92 47.8
Rhsim13G0217200 Rhododendron simsii HOM05D001447 ORTHO05D005923 4.2e-17 92.0 96 46.9
BcaC05g28363 Brassica carinata HOM05D001447 ORTHO05D005923 7.2e-17 91.3 105 49.5
CSS0020855 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005923 7.2e-17 91.3 89 49.4
CARHR095600 Cardamine hirsuta HOM05D001447 ORTHO05D005923 9.4e-17 90.9 144 37.5
Psat3g114240 Pisum sativum HOM05D001447 ORTHO05D005923 9.4e-17 90.9 137 40.1
AUR62000166 Chenopodium quinoa HOM05D001447 ORTHO05D005923 1.6e-16 90.1 93 48.4
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 2.1e-16 89.7 89 46.1
Sp3g18100 Schrenkiella parvula HOM05D001447 ORTHO05D005923 2.1e-16 89.7 90 51.1
Sopen02g030930 Solanum pennellii HOM05D001447 ORTHO05D005923 2.7e-16 89.4 89 48.3
Carub.0003s1999 Capsella rubella HOM05D001447 ORTHO05D005923 3.6e-16 89.0 152 35.5
SGA_v2.0_scaffold25G10748 Striga asiatica HOM05D001447 ORTHO05D005923 3.6e-16 89.0 147 35.4
THA.LOC104809267 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 3.6e-16 89.0 107 41.1
THA.LOC104811411 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 3.6e-16 89.0 89 46.1
Cc01_g06480 Coffea canephora HOM05D001447 ORTHO05D005923 4.7e-16 88.6 93 44.1
Aqoxy2G00275 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 8.0e-16 87.8 145 38.6
MELO3C014572.2 Cucumis melo HOM05D001447 ORTHO05D005923 8.0e-16 87.8 90 46.7
Ah.06g193790 Amaranthus hybridus HOM05D001447 ORTHO05D005923 1.0e-15 87.4 93 47.3
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 1.0e-15 87.4 90 46.7
Aqoxy2G00276 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 3.0e-15 85.9 149 37.6
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 3.0e-15 85.9 156 35.3
Solyc02g086250.4 Solanum lycopersicum HOM05D001447 ORTHO05D005923 3.9e-15 85.5 141 34.8
SEGI_06958 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 6.7e-15 84.7 98 40.8
Lj2A623T26 Lonicera japonica HOM05D001447 ORTHO05D005923 8.8e-15 84.3 98 44.9
Nitab4.5_0003652g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005923 1.5e-14 83.6 140 32.9
Lj5A793G14 Lonicera japonica HOM05D001447 ORTHO05D005923 2.6e-14 82.8 99 43.4
SEGI_16617 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 3.3e-14 82.4 97 38.1
PSO210G7517 Papaver somniferum HOM05D001447 ORTHO05D005923 1.7e-13 80.1 169 32.5
AUR62039845 Chenopodium quinoa HOM05D001447 ORTHO05D005923 4.8e-13 78.6 106 41.5
SHI27451 Sapria himalayana HOM05D001447 ORTHO05D000654 1.1e-12 77.4 119 36.1
vmacro04118 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 1.4e-12 77.0 154 32.5
unitig_8.g3773 Utricularia gibba HOM05D001447 ORTHO05D005923 1.8e-12 76.6 109 39.4
Lsat_1_v5_gn_2_28360 Lactuca sativa HOM05D001447 ORTHO05D005923 2.0e-11 73.2 93 37.6
ECA233G1682 Erigeron canadensis HOM05D001447 ORTHO05D005923 5.9e-11 71.6 133 29.3
Sed0027916 Sechium edule HOM05D001447 ORTHO05D005923 5.9e-11 71.6 61 50.8
BcaB01g01441 Brassica carinata HOM05D001447 ORTHO05D005923 2.9e-10 69.3 85 41.2
TAR622G0649 Trochodendron aralioides HOM05D000050 ORTHO05D000654 2.9e-10 69.3 121 35.5
HanXRQChr14g0441711 Helianthus annuus HOM05D001447 ORTHO05D005923 6.5e-10 68.2 99 34.3
EL10Ac4g10184 Beta vulgaris HOM05D001447 ORTHO05D005923 1.9e-09 66.6 74 48.6
Nitab4.5_0000753g0110 Nicotiana tabacum HOM05D001447 ORTHO05D005923 4.2e-09 65.5 61 49.2
TAR623G0319 Trochodendron aralioides HOM05D001447 ORTHO05D005923 4.7e-08 62.0 49 61.2
TAR623G0653 Trochodendron aralioides HOM05D001447 ORTHO05D005923 8.0e-08 61.2 55 58.2
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 1.8e-07 60.1 146 30.1
ECA234G3051 Erigeron canadensis HOM05D001447 ORTHO05D005923 4.0e-07 58.9 78 37.2
Thhalv10023995m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 4.0e-07 58.9 42 52.4
BcaB02g07197 Brassica carinata HOM05D001447 ORTHO05D005923 5.2e-07 58.5 62 50.0
vmacro10456 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 8.8e-07 57.8 150 34.0


User provided reference genes

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