Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0540 Ceratophyllum demersum HOM05D001237 ORTHO05D009110 3.3e-192 674.9 333 100.0
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 5.0e-116 421.8 293 71.7
TAR629G2165 Trochodendron aralioides HOM05D001237 ORTHO05D009110 1.8e-113 413.3 293 70.0
GSVIVG01022633001 Vitis vinifera HOM05D001237 ORTHO05D009110 1.8e-113 413.3 302 69.5
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 4.1e-110 402.1 269 74.0
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 6.9e-110 401.4 259 74.5
Oeu038592.1 Olea europaea HOM05D001237 ORTHO05D009110 5.9e-109 398.3 270 73.7
Dinv15842 Davidia involucrata HOM05D001237 ORTHO05D009110 1.0e-108 397.5 283 69.6
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 1.7e-108 396.7 249 77.1
RcHm_v2.0_Chr7g0213081 Rosa chinensis HOM05D001237 ORTHO05D009110 2.9e-108 396.0 285 69.8
Actinidia18147 Actinidia chinensis HOM05D001237 ORTHO05D009110 1.1e-107 394.0 263 73.8
Sed0014021 Sechium edule HOM05D001237 ORTHO05D009110 1.4e-107 393.7 251 76.1
CsaV3_3G001140 Cucumis sativus L. HOM05D001237 ORTHO05D009110 2.7e-106 389.4 231 81.0
Phvul.002G132200 Phaseolus vulgaris HOM05D001237 ORTHO05D009110 2.7e-106 389.4 290 67.2
Cc00_g24190 Coffea canephora HOM05D001237 ORTHO05D009110 4.7e-106 388.7 286 68.2
FAN08G1241 Fragaria x ananassa HOM05D001237 ORTHO05D009110 4.7e-106 388.7 285 69.1
Cpa.g.sc24.66 Carica papaya HOM05D001237 ORTHO05D009110 6.1e-106 388.3 257 72.8
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 7.9e-106 387.9 252 75.0
Lalb_Chr05g0215521 Lupinus albus HOM05D001237 ORTHO05D009110 7.9e-106 387.9 288 66.7
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 7.9e-106 387.9 266 70.7
Hma1.2p1_0979F.1_g243590 Hydrangea macrophylla HOM05D001237 ORTHO05D009110 1.0e-105 387.5 285 68.8
Prupe.5G022700 Prunus persica HOM05D001237 ORTHO05D009110 1.0e-105 387.5 287 70.0
FAN18G3541 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.4e-105 387.1 285 69.1
Potri.003G100300 Populus trichocarpa HOM05D001237 ORTHO05D009110 1.4e-105 387.1 237 78.9
Solyc08g075990.3 Solanum lycopersicum HOM05D001237 ORTHO05D009110 1.4e-105 387.1 266 69.9
CANSAT25G2402 Cannabis sativa HOM05D001237 ORTHO05D009110 1.8e-105 386.7 264 73.1
CAN.G773.2 Capsicum annuum HOM05D001237 ORTHO05D009110 3.0e-105 386.0 249 73.5
FAN18G4185 Fragaria x ananassa HOM05D001237 ORTHO05D009110 3.9e-105 385.6 285 68.8
Rhsim07G0137000 Rhododendron simsii HOM05D001237 ORTHO05D009110 3.9e-105 385.6 308 64.6
MELO3C013804.2 Cucumis melo HOM05D001237 ORTHO05D009110 5.1e-105 385.2 241 78.4
FvH4_5g23760 Fragaria vesca HOM05D001237 ORTHO05D009110 5.1e-105 385.2 285 68.8
CiPaw.12G070700 Carya illinoinensis HOM05D001237 ORTHO05D009110 1.1e-104 384.0 291 66.3
TPR.G29137 Trifolium pratense HOM05D001237 ORTHO05D009110 1.1e-104 384.0 230 80.0
VMungo1215G0366 Vigna mungo HOM05D001237 ORTHO05D000217 1.1e-104 384.0 294 66.3
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 2.0e-104 383.3 309 64.7
Nitab4.5_0002735g0030 Nicotiana tabacum HOM05D001237 ORTHO05D009110 4.4e-104 382.1 259 71.8
Eucgr.E01249 Eucalyptus grandis HOM05D001237 ORTHO05D009110 5.7e-104 381.7 231 78.8
Lj2g0015654 Lotus japonicus HOM05D001237 ORTHO05D009110 5.7e-104 381.7 254 72.8
Cfa012569 Carpinus fangiana HOM05D001237 ORTHO05D009110 7.4e-104 381.3 232 78.4
Migut.E01337 Erythranthe guttata HOM05D001237 ORTHO05D009110 9.7e-104 380.9 262 71.8
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 9.7e-104 380.9 303 64.4
ATR0829G072 Amborella trichopoda HOM05D001237 ORTHO05D009110 1.3e-103 380.6 226 80.1
Psat2g141080 Pisum sativum HOM05D001237 ORTHO05D009110 1.3e-103 380.6 239 75.7
PSO782G3536 Papaver somniferum HOM05D001237 ORTHO05D009110 1.7e-103 380.2 261 70.1
Nitab4.5_0001033g0010 Nicotiana tabacum HOM05D001237 ORTHO05D009110 2.8e-103 379.4 258 71.3
Medtr5g027220 Medicago truncatula HOM05D001237 ORTHO05D009110 3.7e-103 379.0 294 68.0
Ah.07g201260 Amaranthus hybridus HOM05D001237 ORTHO05D009110 6.3e-103 378.3 225 79.6
PGR042G3955 Punica granatum HOM05D001237 ORTHO05D009110 6.3e-103 378.3 246 74.4
Sc07g0008510 Simmondsia chinensis HOM05D001237 ORTHO05D009110 6.3e-103 378.3 281 68.3
CSS0010822 Camellia sinensis var. sinensis HOM05D001237 ORTHO05D009110 1.1e-102 377.5 279 68.8
Duzib084G0831 Durio zibethinus HOM05D001237 ORTHO05D009110 1.4e-102 377.1 271 69.0
THA.LOC104812764 Tarenaya hassleriana HOM05D001237 ORTHO05D009110 2.4e-102 376.3 249 74.3
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 2.6e-101 372.9 251 72.9
Zm00001eb208900 Zea mays HOM05D001237 ORTHO05D009110 5.9e-101 371.7 276 68.1
AUR62007400 Chenopodium quinoa HOM05D001237 ORTHO05D009110 2.9e-100 369.4 267 70.0
ECA233G0844 Erigeron canadensis HOM05D001237 ORTHO05D009110 6.5e-100 368.2 245 71.8
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 8.5e-100 367.9 231 75.8
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 1.9e-99 366.7 231 75.3
DCAR_024946 Daucus carota HOM05D001577 ORTHO05D009110 2.5e-99 366.3 226 76.5
EL10Ac5g11946 Beta vulgaris HOM05D001237 ORTHO05D009110 3.2e-99 365.9 241 73.9
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 5.5e-99 365.2 231 75.3
Gohir.A08G151200 Gossypium hirsutum HOM05D001237 ORTHO05D009110 5.5e-99 365.2 271 67.5
COL.COLO4_27340 Corchorus olitorius HOM05D001237 ORTHO05D009110 1.2e-98 364.0 271 67.2
Gorai.004G179700 Gossypium raimondii HOM05D001237 ORTHO05D009110 4.7e-98 362.1 271 67.2
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 8.0e-98 361.3 231 74.0
A06p38920 Brassica napus HOM05D001237 ORTHO05D009110 1.8e-97 360.1 231 74.0
C07p39410 Brassica napus HOM05D001237 ORTHO05D009110 1.8e-97 360.1 231 73.6
BraA06t26806Z Brassica rapa HOM05D001237 ORTHO05D009110 2.3e-97 359.8 231 74.0
Ca_25144_v3 Cicer arietinum L. HOM05D001237 ORTHO05D000217 5.2e-97 358.6 218 78.9
BolC7t44460H Brassica oleracea HOM05D001237 ORTHO05D009110 8.8e-97 357.8 231 73.2
Thhalv10004626m.g Eutrema salsugineum HOM05D001237 ORTHO05D009110 1.1e-96 357.5 231 74.0
Sabra03G0068500 Salix brachista HOM05D001237 ORTHO05D009110 1.7e-95 353.6 233 75.5
Aa31LG9G15560 Aethionema arabicum HOM05D001237 ORTHO05D009110 3.7e-95 352.4 244 70.9
Glyma.01G147700 Glycine max HOM05D001237 ORTHO05D009110 2.4e-94 349.7 236 72.9
HanXRQChr08g0226791 Helianthus annuus HOM05D001237 ORTHO05D009110 6.5e-92 341.7 219 74.9
Glyma.20G094800 Glycine max HOM05D001237 ORTHO05D009110 1.4e-89 334.0 197 80.7
Peaxi162Scf00408g00416 Petunia axillaris HOM05D001237 ORTHO05D009110 4.0e-89 332.4 238 69.7
Lsat_1_v5_gn_6_17621 Lactuca sativa HOM05D001237 ORTHO05D009110 2.6e-88 329.7 286 60.5
unitig_747.g21357 Utricularia gibba HOM05D000467 ORTHO05D000379 1.8e-86 323.6 223 71.7
BcaC06g30758 Brassica carinata HOM05D001237 ORTHO05D009110 2.7e-85 319.7 231 68.0
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 5.9e-85 318.5 232 65.1
CARHR182950 Cardamine hirsuta HOM05D001237 ORTHO05D009110 2.1e-82 310.1 194 76.3
ClCG10G001120 Citrullus lanatus HOM05D001237 ORTHO05D009110 1.8e-81 307.0 231 69.3
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 6.8e-81 305.1 234 60.3
SGA_v2.0_scaffold111G31373 Striga asiatica HOM05D001237 ORTHO05D009110 1.1e-78 297.7 180 78.9
CBR_g18855 Chara braunii HOM05D001237 ORTHO05D009110 5.0e-76 288.9 256 55.9
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis HOM05D001237 ORTHO05D009110 8.6e-76 288.1 267 51.7
SMO356G0709 Selaginella moellendorffii HOM05D001237 ORTHO05D009110 8.9e-73 278.1 232 54.3
arahy.Tifrunner.gnm1.ann1.3EKV6C Arachis hypogaea HOM05D001237 ORTHO05D009110 1.2e-69 267.7 287 52.6
arahy.Tifrunner.gnm1.ann1.YIEM7C Arachis hypogaea HOM05D001237 ORTHO05D009110 1.2e-69 267.7 287 52.6
Hund11115 Selenicereus undatus HOM05D001237 ORTHO05D009110 7.5e-64 248.4 153 79.1
Glyma.09G212000 Glycine max HOM05D001237 ORTHO05D009110 3.7e-63 246.1 161 73.3
QL12p001026 Quercus lobata HOM05D001237 ORTHO05D009110 8.6e-60 235.0 147 76.2
SEGI_12758 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 2.6e-48 196.8 109 81.7
HPP92_025933 Vanilla planifolia HOM05D001237 ORTHO05D009110 1.9e-43 180.6 118 72.0
Cre04.g212500 Chlamydomonas reinhardtii HOM05D001237 ORTHO05D009110 6.8e-41 172.2 252 38.5
RcHm_v2.0_Chr7g0213121 Rosa chinensis HOM05D001237 ORTHO05D009110 4.9e-39 166.0 216 46.8
PRCOL_00004822 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 2.4e-38 163.7 247 38.9
MCO15G307 Micromonas commoda HOM05D001237 ORTHO05D009110 1.3e-36 157.9 309 31.7
Sopen09g023280 Solanum pennellii HOM05D001237 ORTHO05D009110 5.6e-35 152.5 98 72.4
Lju2073A0T61 Lonicera japonica HOM05D001237 ORTHO05D009110 1.9e-27 127.5 89 69.7
MCO12G167 Micromonas commoda HOM05D001237 ORTHO05D009110 3.6e-26 123.2 283 30.0
PRCOL_00006184 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 2.4e-22 110.5 277 28.9
SalBow1G6490 Salvia bowleyana HOM05D001237 ORTHO05D009110 1.6e-21 107.8 71 70.4
FAN04G3094 Fragaria x ananassa HOM05D001237 ORTHO05D009110 4.6e-21 106.3 113 54.0
SEGI_16157 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 3.3e-19 100.1 77 57.1
Gohir.D08G172350 Gossypium hirsutum HOM05D001237 ORTHO05D009110 9.0e-17 92.0 51 74.5
Gohir.D08G172400 Gossypium hirsutum HOM05D001237 ORTHO05D009110 2.9e-15 87.0 123 44.7
vmacro14221 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 1.7e-07 61.2 44 68.2


User provided reference genes

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