Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 3.3e-65 251.5 123 100.0
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 5.8e-38 161.0 101 75.2
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 1.3e-37 159.8 104 73.1
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.7e-37 159.5 105 71.4
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 8.4e-37 157.1 100 74.0
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.4e-36 156.4 105 71.4
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.4e-36 156.4 105 71.4
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 1.9e-36 156.0 95 73.7
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 1.9e-36 156.0 100 73.0
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 3.2e-36 155.2 100 73.0
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 3.2e-36 155.2 100 73.0
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 3.2e-36 155.2 92 76.1
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 4.2e-36 154.8 100 72.0
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 4.2e-36 154.8 100 70.0
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 4.2e-36 154.8 100 72.0
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 5.5e-36 154.5 101 70.3
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 7.1e-36 154.1 100 72.0
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 9.3e-36 153.7 100 72.0
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 9.3e-36 153.7 100 72.0
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 1.6e-35 152.9 100 71.0
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 1.6e-35 152.9 100 71.0
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 2.1e-35 152.5 100 71.0
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 2.7e-35 152.1 105 67.6
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 2.7e-35 152.1 105 66.7
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 2.7e-35 152.1 105 66.7
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 2.7e-35 152.1 100 71.0
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 2.7e-35 152.1 101 71.3
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 3.5e-35 151.8 105 64.8
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 3.5e-35 151.8 100 70.0
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 3.5e-35 151.8 100 73.0
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 4.6e-35 151.4 92 72.8
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 4.6e-35 151.4 105 66.7
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 4.6e-35 151.4 100 71.0
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 4.6e-35 151.4 100 71.0
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 4.6e-35 151.4 92 70.7
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 4.6e-35 151.4 105 66.7
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 6.0e-35 151.0 105 66.7
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 7.9e-35 150.6 105 66.7
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 7.9e-35 150.6 106 64.2
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 7.9e-35 150.6 100 69.0
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 7.9e-35 150.6 100 69.0
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 7.9e-35 150.6 100 69.0
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 7.9e-35 150.6 100 71.0
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 1.0e-34 150.2 92 71.7
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 1.0e-34 150.2 112 62.5
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 1.0e-34 150.2 100 69.0
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 1.3e-34 149.8 100 70.0
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 1.3e-34 149.8 112 61.6
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 1.3e-34 149.8 100 70.0
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 2.3e-34 149.1 105 65.7
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 3.0e-34 148.7 97 70.1
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 3.0e-34 148.7 105 65.7
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 3.0e-34 148.7 105 65.7
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 3.0e-34 148.7 111 62.2
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 3.9e-34 148.3 105 65.7
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 3.9e-34 148.3 100 72.0
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 3.9e-34 148.3 111 62.2
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 3.9e-34 148.3 100 70.0
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 3.9e-34 148.3 105 67.6
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 5.1e-34 147.9 106 63.2
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 5.1e-34 147.9 103 65.0
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 8.7e-34 147.1 99 68.7
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 8.7e-34 147.1 92 68.5
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 8.7e-34 147.1 112 60.7
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 8.7e-34 147.1 111 62.2
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 8.7e-34 147.1 105 64.8
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 1.1e-33 146.7 92 69.6
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 1.1e-33 146.7 108 63.0
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 1.5e-33 146.4 104 66.3
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 1.9e-33 146.0 100 67.0
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 2.5e-33 145.6 100 67.0
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 3.3e-33 145.2 92 68.5
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 4.3e-33 144.8 93 67.7
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 4.3e-33 144.8 105 64.8
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 7.4e-33 144.1 105 64.8
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 7.4e-33 144.1 107 63.6
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 2.1e-32 142.5 107 61.7
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 3.7e-32 141.7 101 67.3
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 4.8e-32 141.4 104 63.5
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 4.8e-32 141.4 104 63.5
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 4.8e-32 141.4 100 64.0
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 4.8e-32 141.4 100 64.0
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 6.2e-32 141.0 100 67.0
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 1.1e-31 140.2 90 67.8
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 4.0e-31 138.3 100 68.0
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 5.3e-31 137.9 92 66.3
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 9.0e-31 137.1 122 55.7
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 5.8e-30 134.4 81 74.1
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 2.5e-28 129.0 92 64.1
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 3.0e-26 122.1 82 65.9
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 3.9e-26 121.7 82 64.6
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 6.7e-26 120.9 103 55.3
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 1.6e-24 116.3 108 45.4
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 8.2e-24 114.0 111 51.4
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 1.5e-22 109.8 76 69.7
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 4.5e-22 108.2 99 53.5
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.9e-20 102.8 63 69.8
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 1.9e-20 102.8 73 68.5
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 2.5e-20 102.4 74 64.9
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 7.2e-20 100.9 64 64.1
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 1.6e-19 99.8 62 71.0
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 3.6e-19 98.6 90 46.7
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 4.6e-19 98.2 75 65.3
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 4.6e-19 98.2 94 51.1
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.8e-18 96.3 71 57.7
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 6.7e-18 94.4 68 58.8
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 1.5e-17 93.2 89 52.8
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 9.7e-17 90.5 63 61.9
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 1.7e-16 89.7 59 72.9
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 3.7e-16 88.6 49 83.7
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 3.7e-16 88.6 129 43.4
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 4.1e-15 85.1 88 45.5
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 3.9e-10 68.6 49 61.2
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 6.3e-08 61.2 74 41.9
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 2.0e-06 56.2 49 57.1


User provided reference genes

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