Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 7.1e-69 263.8 136 100.0
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 1.7e-51 206.1 135 82.2
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 7.6e-31 137.5 125 56.8
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 2.5e-29 132.5 119 57.1
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 4.2e-29 131.7 125 53.6
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 1.2e-28 130.2 125 56.0
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 2.1e-28 129.4 125 55.2
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 2.7e-28 129.0 125 52.8
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 2.3e-27 125.9 125 51.2
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 3.9e-27 125.2 124 52.4
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 3.9e-27 125.2 118 54.2
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 3.9e-27 125.2 122 53.3
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 1.9e-26 122.9 122 55.7
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 2.5e-26 122.5 125 48.8
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 2.5e-26 122.5 128 50.8
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 2.5e-26 122.5 125 51.2
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 3.3e-26 122.1 125 50.4
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 3.3e-26 122.1 125 49.6
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 7.4e-26 120.9 130 46.2
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 9.7e-26 120.6 118 53.4
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 1.3e-25 120.2 128 46.9
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.3e-25 120.2 125 47.2
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.6e-25 119.8 125 48.8
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.6e-25 119.8 125 48.0
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 1.6e-25 119.8 118 50.0
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 2.2e-25 119.4 124 53.2
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 2.2e-25 119.4 126 46.0
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 2.8e-25 119.0 118 50.0
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 3.7e-25 118.6 128 46.1
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 3.7e-25 118.6 123 48.0
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 4.8e-25 118.2 123 47.2
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 6.3e-25 117.9 125 46.4
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 8.2e-25 117.5 117 51.3
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 8.2e-25 117.5 121 49.6
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 8.2e-25 117.5 127 46.5
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 1.1e-24 117.1 123 48.8
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 2.4e-24 115.9 125 46.4
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 2.4e-24 115.9 123 48.0
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 5.3e-24 114.8 126 49.2
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 5.3e-24 114.8 125 44.8
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 6.9e-24 114.4 119 48.7
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 9.0e-24 114.0 124 46.0
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 2.0e-23 112.8 121 50.4
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 2.6e-23 112.5 119 47.9
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 3.4e-23 112.1 125 46.4
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 4.5e-23 111.7 125 44.0
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 4.5e-23 111.7 125 44.0
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 5.9e-23 111.3 120 46.7
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 5.9e-23 111.3 127 46.5
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 7.6e-23 110.9 124 47.6
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 7.6e-23 110.9 117 47.0
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 7.6e-23 110.9 122 47.5
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 1.3e-22 110.2 122 48.4
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 2.9e-22 109.0 125 46.4
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 5.0e-22 108.2 117 45.3
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 6.5e-22 107.8 111 51.4
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 8.5e-22 107.5 125 44.8
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 8.5e-22 107.5 119 45.4
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 1.2e-20 103.6 121 45.5
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 2.1e-20 102.8 115 45.2
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 2.7e-20 102.4 127 44.9
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 4.6e-20 101.7 111 50.5
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 6.1e-20 101.3 121 43.8
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 6.1e-20 101.3 125 40.8
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 7.9e-20 100.9 121 42.1
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 7.9e-20 100.9 121 43.8
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 7.9e-20 100.9 125 44.8
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 1.0e-19 100.5 122 43.4
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 1.0e-19 100.5 125 41.6
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 1.0e-19 100.5 121 43.8
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 1.4e-19 100.1 121 41.3
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 1.4e-19 100.1 121 41.3
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 1.4e-19 100.1 121 41.3
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 3.9e-19 98.6 121 43.8
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 3.9e-19 98.6 113 48.7
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 3.9e-19 98.6 113 48.7
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 3.9e-19 98.6 125 44.0
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 5.1e-19 98.2 123 43.9
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 6.7e-19 97.8 113 46.9
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 6.7e-19 97.8 124 39.5
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 8.8e-19 97.4 116 44.0
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 1.1e-18 97.1 115 44.3
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.5e-18 96.7 121 43.0
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.5e-18 96.7 121 43.0
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 1.5e-18 96.7 124 44.4
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 1.9e-18 96.3 125 40.8
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 1.9e-18 96.3 105 49.5
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 1.9e-18 96.3 124 38.7
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 2.5e-18 95.9 120 45.0
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 4.3e-18 95.1 123 40.7
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 4.3e-18 95.1 123 40.7
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 5.7e-18 94.7 108 50.0
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 1.7e-17 93.2 112 46.4
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 2.8e-17 92.4 125 43.2
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 3.7e-17 92.0 108 49.1
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 3.7e-17 92.0 108 49.1
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 5.9e-15 84.7 149 36.2
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.4e-13 80.1 112 41.1
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 7.2e-13 77.8 118 39.8
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 1.2e-12 77.0 115 34.8
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 4.7e-12 75.1 125 31.2
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 2.0e-10 69.7 47 70.2
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 2.0e-10 69.7 78 50.0
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 2.0e-10 69.7 80 45.0
CBR_g39926 Chara braunii HOM05D006478 ORTHO05D008071 1.7e-09 66.6 117 34.2
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 7.0e-08 61.2 100 33.0
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 9.1e-08 60.8 118 33.9
Pp3c1_3140 Physcomitrium patens HOM05D004333 ORTHO05D005363 1.2e-07 60.5 101 32.7
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 1.5e-07 60.1 80 43.8
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 5.9e-07 58.2 47 57.4
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 2.9e-06 55.8 74 33.8
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 8.5e-06 54.3 88 36.4


User provided reference genes

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