Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0414 Ceratophyllum demersum HOM05D005260 ORTHO05D006390 4.8e-149 531.2 274 100.0
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 2.0e-62 243.4 365 44.7
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 2.7e-59 233.0 351 44.7
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 1.5e-54 217.2 324 44.1
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 1.5e-54 217.2 324 44.1
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 1.3e-53 214.2 363 42.4
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 2.4e-52 209.9 371 41.2
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 9.3e-52 208.0 367 42.0
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 3.5e-51 206.1 351 43.0
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 4.6e-51 205.7 350 42.9
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.7e-50 203.8 351 42.7
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 3.0e-50 203.0 352 42.6
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.1e-49 201.1 357 41.2
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 5.6e-49 198.7 354 41.8
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 7.3e-49 198.4 330 41.5
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.1e-48 196.8 370 38.4
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 1.8e-47 193.7 354 41.8
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.4e-47 193.4 370 38.1
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 3.1e-47 193.0 353 40.2
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 3.1e-47 193.0 363 39.9
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 3.1e-47 193.0 354 39.3
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 4.0e-47 192.6 359 39.6
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 5.3e-47 192.2 363 39.9
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 6.9e-47 191.8 349 40.4
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 9.0e-47 191.4 362 40.3
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 1.5e-46 190.7 371 39.9
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 2.0e-46 190.3 371 39.9
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 4.5e-46 189.1 357 38.9
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 7.6e-46 188.3 357 38.7
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 7.6e-46 188.3 372 39.5
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 7.6e-46 188.3 349 39.8
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 1.7e-45 187.2 362 37.8
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 2.9e-45 186.4 361 38.5
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 3.8e-45 186.0 371 40.2
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 4.9e-45 185.7 371 38.8
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 8.4e-45 184.9 341 39.0
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 1.9e-44 183.7 352 39.8
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 3.2e-44 183.0 361 40.2
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 3.2e-44 183.0 341 39.3
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 1.2e-43 181.0 362 37.6
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 1.6e-43 180.6 343 39.9
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 1.6e-43 180.6 374 36.1
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 2.1e-43 180.3 361 38.0
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 2.7e-43 179.9 360 37.2
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 6.0e-43 178.7 344 39.8
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 2.3e-42 176.8 375 35.2
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 3.0e-42 176.4 360 36.7
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 3.0e-42 176.4 358 38.5
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 3.9e-42 176.0 352 38.4
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 5.1e-42 175.6 359 38.2
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 8.7e-42 174.9 351 38.7
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 1.9e-41 173.7 360 37.2
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 3.3e-41 172.9 332 38.3
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 1.6e-40 170.6 361 38.5
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 1.6e-40 170.6 356 37.9
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 2.1e-40 170.2 365 37.8
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 2.8e-40 169.9 366 37.7
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 4.8e-40 169.1 353 36.5
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 6.2e-40 168.7 365 37.3
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 8.1e-40 168.3 345 36.8
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 1.8e-39 167.2 361 36.8
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 2.4e-39 166.8 345 36.5
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 4.0e-39 166.0 365 37.0
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 6.9e-39 165.2 370 34.3
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 1.2e-38 164.5 350 36.3
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 3.4e-38 162.9 349 37.2
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 1.7e-37 160.6 360 35.3
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 2.9e-37 159.8 354 34.7
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 1.1e-36 157.9 371 37.2
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 3.2e-36 156.4 280 41.1
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 9.3e-36 154.8 352 36.9
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 1.2e-35 154.5 352 36.9
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 7.9e-35 151.8 347 36.0
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 7.9e-35 151.8 332 38.6
EL10Ac8g18850 Beta vulgaris HOM05D005260 ORTHO05D006390 3.9e-34 149.4 377 32.4
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 9.6e-33 144.8 355 35.8
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 3.7e-32 142.9 355 35.5
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 3.7e-32 142.9 355 35.5
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 1.4e-31 141.0 349 33.0
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 1.2e-30 137.9 359 33.1
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 1.2e-30 137.9 347 33.4
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 2.0e-30 137.1 357 34.7
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 2.0e-30 137.1 372 33.6
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 2.6e-30 136.7 359 32.9
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 2.6e-30 136.7 347 33.4
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 4.5e-30 136.0 329 34.0
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 5.8e-30 135.6 343 35.0
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 7.6e-30 135.2 334 33.5
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 7.6e-30 135.2 364 32.7
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 2.2e-29 133.7 324 35.2
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 2.2e-29 133.7 339 34.2
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 2.9e-29 133.3 323 33.1
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 3.8e-29 132.9 360 33.1
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 3.8e-29 132.9 361 33.2
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 3.8e-29 132.9 309 34.3
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 1.1e-28 131.3 342 33.3
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 1.4e-28 131.0 342 33.0
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 2.5e-28 130.2 310 34.2
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 2.5e-28 130.2 352 33.2
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 4.2e-28 129.4 359 32.9
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 5.5e-28 129.0 356 33.4
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 7.1e-28 128.6 304 34.9
AUR62031434 Chenopodium quinoa HOM05D005260 ORTHO05D006390 7.1e-28 128.6 317 32.8
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 4.6e-27 125.9 307 34.5
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 1.0e-26 124.8 324 33.0
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 3.9e-26 122.9 305 33.1
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 5.1e-26 122.5 303 33.3
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 5.1e-26 122.5 153 50.3
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 4.3e-25 119.4 307 33.2
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 7.4e-25 118.6 279 33.3
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 9.7e-25 118.2 359 31.5
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 2.8e-24 116.7 262 35.5
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 4.8e-24 115.9 356 30.6
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 1.5e-22 110.9 157 46.5
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 2.6e-22 110.2 348 30.7
HPP92_018748 Vanilla planifolia HOM05D005260 ORTHO05D006390 1.7e-21 107.5 132 47.0
HPP92_018747 Vanilla planifolia HOM05D005260 ORTHO05D006390 2.9e-21 106.7 148 47.3
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 6.5e-21 105.5 147 45.6
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 6.5e-21 105.5 147 45.6
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 4.2e-20 102.8 300 31.7
AUR62021106 Chenopodium quinoa HOM05D005260 ORTHO05D006390 1.0e-18 98.2 256 32.0
Lalb_Chr12g0198621 Lupinus albus HOM05D005260 ORTHO05D006390 1.8e-18 97.4 151 45.7
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 1.1e-15 88.2 58 74.1
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 2.4e-15 87.0 224 30.4
MELO3C004727.2 Cucumis melo HOM05D005260 ORTHO05D006390 1.2e-14 84.7 69 62.3
unitig_0.g2819 Utricularia gibba HOM05D005260 ORTHO05D006390 1.2e-14 84.7 151 40.4
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 4.5e-14 82.8 159 40.3
ATR0579G027 Amborella trichopoda HOM05D005260 ORTHO05D006390 3.8e-13 79.7 115 44.3
TAR625G0635 Trochodendron aralioides HOM05D005260 ORTHO05D006390 8.5e-13 78.6 126 45.2
Atru.chr13.1961 Acer truncatum HOM05D005260 ORTHO05D006390 1.9e-12 77.4 137 41.6
AagrBONN_evm.TU.Sc2ySwM_344.4069 Anthoceros agrestis HOM05D005260 ORTHO05D006390 2.5e-12 77.0 143 39.2
unitig_747.g21900 Utricularia gibba HOM05D005260 ORTHO05D006390 1.5e-09 67.8 79 50.6
ClCG06G012260 Citrullus lanatus HOM05D005260 ORTHO05D006390 9.7e-09 65.1 55 58.2
Cre03.g150650 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 6.9e-07 58.9 55 56.4


User provided reference genes

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