Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 2.1e-291 1005.0 507 100.0
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 3.9e-205 718.4 422 88.4
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 2.9e-75 287.0 434 42.2
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 3.7e-70 270.0 436 43.6
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 6.3e-70 269.2 436 43.1
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 3.9e-64 250.0 448 41.1
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.1e-63 248.4 431 41.5
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 1.0e-59 235.3 439 39.2
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 1.0e-59 235.3 424 41.5
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 3.6e-57 226.9 420 38.1
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 3.9e-56 223.4 433 36.7
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 6.7e-56 222.6 512 35.7
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 1.7e-54 218.0 402 39.3
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 1.8e-53 214.5 439 37.4
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 3.1e-53 213.8 417 37.6
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 9.1e-53 212.2 417 37.4
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 1.2e-52 211.8 430 36.7
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 1.6e-52 211.5 433 35.8
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 4.5e-52 209.9 414 36.7
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 1.3e-51 208.4 421 36.6
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 5.0e-51 206.5 411 38.9
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 7.2e-50 202.6 433 37.4
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 9.4e-50 202.2 435 36.1
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 1.2e-49 201.8 427 35.8
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 1.6e-49 201.4 424 38.2
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 6.1e-49 199.5 424 34.4
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 8.0e-49 199.1 424 37.7
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 1.4e-48 198.4 515 31.8
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 6.7e-48 196.1 428 35.3
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 6.7e-48 196.1 404 36.6
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 1.1e-47 195.3 434 34.1
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 1.5e-47 194.9 419 37.2
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 4.4e-47 193.4 421 36.6
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 4.4e-47 193.4 428 35.0
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 7.5e-47 192.6 427 34.9
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.7e-46 191.4 408 38.2
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 1.7e-46 191.4 394 37.8
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 6.3e-46 189.5 426 34.7
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 8.2e-46 189.1 444 34.5
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 8.2e-46 189.1 421 35.9
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 1.8e-45 188.0 423 34.5
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 5.3e-45 186.4 406 37.9
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 5.3e-45 186.4 425 33.2
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 9.1e-45 185.7 412 37.1
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 9.1e-45 185.7 424 34.4
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 1.2e-44 185.3 439 31.9
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 3.5e-44 183.7 427 35.4
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 3.5e-44 183.7 401 36.4
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 5.9e-44 183.0 437 32.7
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 5.9e-44 183.0 430 35.6
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 7.7e-44 182.6 401 35.9
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 1.0e-43 182.2 433 33.0
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 1.0e-43 182.2 413 34.6
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.0e-43 182.2 420 33.3
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 2.9e-43 180.6 436 35.3
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 3.8e-43 180.3 397 36.3
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 5.0e-43 179.9 410 35.4
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 1.1e-42 178.7 435 33.6
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 1.5e-42 178.3 437 33.6
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 7.2e-42 176.0 442 33.9
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 9.4e-42 175.6 409 35.2
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 4.7e-41 173.3 407 34.6
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 2.0e-39 167.9 384 33.9
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 1.4e-37 161.8 427 33.7
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 2.4e-37 161.0 437 33.6
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 9.1e-37 159.1 294 38.1
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 9.1e-37 159.1 425 34.1
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 1.2e-36 158.7 385 34.0
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 5.0e-35 153.3 440 33.2
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 1.9e-34 151.4 533 27.2
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 2.5e-34 151.0 441 33.3
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 2.5e-34 151.0 425 29.9
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 5.5e-34 149.8 290 36.9
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 1.6e-33 148.3 429 31.2
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.1e-33 147.9 306 35.0
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 6.1e-33 146.4 236 41.1
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 1.7e-30 138.3 298 32.9
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 2.3e-27 127.9 392 29.1
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 1.5e-26 125.2 269 37.2
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 1.6e-25 121.7 212 36.8
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 5.2e-24 116.7 268 35.1
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 6.8e-24 116.3 397 30.7
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 3.7e-22 110.5 249 34.5
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 3.7e-22 110.5 239 33.1
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 3.9e-19 100.5 473 26.2
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.5e-18 98.6 161 36.0
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 2.5e-18 97.8 126 45.2
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 1.2e-17 95.5 372 30.4
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 1.2e-17 95.5 211 30.3
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.5e-15 88.6 186 39.2
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.3e-14 85.5 118 39.0
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 1.7e-14 85.1 128 39.8
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 2.2e-14 84.7 357 26.6
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 4.9e-14 83.6 126 40.5
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 6.4e-14 83.2 204 27.0
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 2.4e-13 81.3 190 38.9
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 4.6e-12 77.0 256 27.3
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 2.3e-11 74.7 87 49.4
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 4.3e-10 70.5 86 39.5
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 7.5e-07 59.7 82 31.7
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 6.4e-06 56.6 60 50.0


User provided reference genes

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