Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 3.4e-166 588.2 282 100.0
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 5.5e-108 394.8 290 63.8
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 4.4e-105 385.2 295 62.0
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 9.7e-105 384.0 290 61.0
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 2.2e-104 382.9 318 60.7
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 2.2e-104 382.9 291 61.2
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 2.8e-104 382.5 282 63.8
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 1.1e-103 380.6 292 61.3
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 2.4e-103 379.4 275 65.1
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 4.1e-103 378.6 301 59.1
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 5.3e-103 378.3 291 59.8
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 7.0e-103 377.9 302 59.6
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 9.1e-103 377.5 289 60.9
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 1.2e-102 377.1 291 61.9
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 2.9e-101 372.5 283 62.2
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 2.9e-101 372.5 292 59.9
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 5.0e-101 371.7 291 61.2
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 4.2e-100 368.6 297 57.2
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 7.2e-100 367.9 293 59.0
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 7.2e-100 367.9 281 59.8
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 9.4e-100 367.5 310 56.8
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 2.1e-99 366.3 274 61.7
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 2.7e-99 365.9 281 59.8
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 2.7e-99 365.9 286 60.1
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 3.6e-99 365.5 288 60.4
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 8.0e-99 364.4 294 60.2
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 1.0e-98 364.0 287 59.9
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 1.0e-98 364.0 291 58.4
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 3.0e-98 362.5 291 59.5
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 4.0e-98 362.1 293 57.7
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 4.0e-98 362.1 291 59.8
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 5.2e-98 361.7 289 58.1
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 6.7e-98 361.3 281 60.1
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 8.8e-98 360.9 316 55.4
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 1.5e-97 360.1 284 59.9
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 1.5e-97 360.1 284 58.5
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 1.5e-97 360.1 300 57.0
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 1.5e-97 360.1 288 59.4
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 1.5e-97 360.1 294 59.5
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 1.5e-97 360.1 302 58.9
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 2.6e-97 359.4 289 57.8
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 3.3e-97 359.0 296 57.4
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 4.4e-97 358.6 289 58.5
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 5.7e-97 358.2 300 59.3
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 7.4e-97 357.8 302 57.6
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 9.7e-97 357.5 300 56.7
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 2.2e-96 356.3 281 59.8
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 2.8e-96 355.9 296 58.1
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 3.7e-96 355.5 295 60.0
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 4.8e-96 355.1 298 56.4
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 4.8e-96 355.1 292 58.2
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 4.8e-96 355.1 294 58.8
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 8.2e-96 354.4 276 59.1
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 1.1e-95 354.0 299 56.5
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 1.4e-95 353.6 294 57.5
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.8e-95 353.2 299 55.9
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 1.8e-95 353.2 314 55.4
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 2.4e-95 352.8 303 56.8
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 4.1e-95 352.1 282 60.3
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 1.2e-94 350.5 290 59.3
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 1.6e-94 350.1 295 55.9
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 2.0e-94 349.7 305 56.1
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 2.0e-94 349.7 295 56.9
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 3.5e-94 349.0 292 57.2
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 7.7e-94 347.8 303 55.8
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 1.3e-93 347.1 301 56.1
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 1.3e-93 347.1 312 55.8
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 1.3e-93 347.1 299 55.9
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 1.3e-93 347.1 296 57.1
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 3.8e-93 345.5 307 56.0
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 3.6e-91 339.0 307 56.0
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 8.0e-91 337.8 290 55.9
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 4.0e-90 335.5 327 52.0
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 4.8e-88 328.6 331 51.1
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 4.8e-88 328.6 293 57.7
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 2.4e-87 326.2 280 58.2
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 5.4e-87 325.1 330 50.0
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 2.2e-85 319.7 262 58.4
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 2.9e-85 319.3 396 43.7
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 1.0e-82 310.8 294 52.0
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 3.4e-81 305.8 300 50.7
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 6.3e-80 301.6 296 49.3
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 1.9e-76 290.0 289 50.2
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 9.5e-76 287.7 238 57.6
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.8e-71 273.5 275 50.2
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 1.9e-68 263.5 306 44.8
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 3.3e-60 236.1 232 53.9
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 7.3e-60 235.0 158 67.1
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 1.7e-56 223.8 167 60.5
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 4.1e-55 219.2 293 40.6
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 2.7e-54 216.5 158 63.9
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 3.5e-54 216.1 177 58.8
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 4.6e-54 215.7 277 40.4
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 6.0e-54 215.3 174 57.5
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 1.7e-53 213.8 176 56.8
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 2.3e-53 213.4 244 48.8
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 5.1e-53 212.2 161 59.6
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 3.3e-52 209.5 176 56.2
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 5.8e-49 198.7 167 57.5
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 3.7e-48 196.1 304 37.2
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 1.9e-36 157.1 115 62.6
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 3.4e-33 146.4 105 61.0
unitig_26.g8846 Utricularia gibba HOM05D006927 ORTHO05D009065 3.8e-32 142.9 94 64.9
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 3.1e-26 123.2 81 65.4
Thecc.05G234900 Theobroma cacao HOM05D006927 ORTHO05D009065 9.0e-26 121.7 62 80.6
SEGI_38351 Sequoiadendron giganteum HOM05D006927 ORTHO05D009065 5.8e-25 119.0 66 72.7
BcaB08g36753 Brassica carinata HOM05D006927 ORTHO05D009065 3.7e-19 99.8 134 40.3
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 5.3e-18 95.9 330 26.1
CBR_g4745 Chara braunii HOM05D000019 ORTHO05D000002 5.3e-10 69.3 68 45.6
C09p59490 Brassica napus HOM05D000005 ORTHO05D040849 9.3e-07 58.5 104 35.6
AagrBONN_evm.TU.Sc2ySwM_368.1936 Anthoceros agrestis HOM05D006927 ORTHO05D071668 2.1e-06 57.4 157 25.5


User provided reference genes

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