Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0255 Ceratophyllum demersum HOM05D003707 ORTHO05D004309 1.0e-100 370.2 201 100.0
CAN.G1173.6 Capsicum annuum HOM05D003707 ORTHO05D004309 1.2e-35 154.1 159 50.9
TWI12G0071 Tripterygium wilfordii HOM05D003707 ORTHO05D004309 9.9e-35 151.0 154 49.4
Sopen04g029730 Solanum pennellii HOM05D003707 ORTHO05D004309 2.9e-34 149.4 159 49.1
Nitab4.5_0009374g0030 Nicotiana tabacum HOM05D003707 ORTHO05D004309 3.7e-34 149.1 159 49.7
Cfa017898 Carpinus fangiana HOM05D003707 ORTHO05D004309 1.4e-33 147.1 152 49.3
Nitab4.5_0003374g0030 Nicotiana tabacum HOM05D003707 ORTHO05D004309 3.2e-33 146.0 159 48.4
Haze_18252 Corylus avellana HOM05D003707 ORTHO05D004309 4.1e-33 145.6 151 49.7
Solyc04g074760.3 Solanum lycopersicum HOM05D003707 ORTHO05D004309 4.1e-33 145.6 159 47.8
Gohir.A06G032900 Gossypium hirsutum HOM05D003707 ORTHO05D004309 5.4e-33 145.2 159 46.5
Hma1.2p1_1568F.1_g291110 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 7.1e-33 144.8 159 49.1
Lj4C96G4 Lonicera japonica HOM05D003707 ORTHO05D004309 7.1e-33 144.8 148 49.3
MBI06_g46882_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 7.1e-33 144.8 179 45.3
Hma1.2p1_1180F.1_g264680 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 9.2e-33 144.4 159 49.1
MBI06_g47948_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 9.2e-33 144.4 179 45.3
MBI03_g38469_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 2.1e-32 143.3 179 46.4
CSS0029872 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 2.7e-32 142.9 148 51.4
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 3.5e-32 142.5 159 49.7
Oeu024817.1 Olea europaea HOM05D003707 ORTHO05D004309 3.5e-32 142.5 158 47.5
Duzib093G2197 Durio zibethinus HOM05D003707 ORTHO05D004309 1.3e-31 140.6 159 45.3
PGR031G2053 Punica granatum HOM05D003707 ORTHO05D004309 1.7e-31 140.2 156 46.8
TWI56G1284 Tripterygium wilfordii HOM05D003707 ORTHO05D004309 1.7e-31 140.2 151 49.7
CiPaw.15G045200 Carya illinoinensis HOM05D003707 ORTHO05D004309 2.3e-31 139.8 153 50.3
Duzib041G0396 Durio zibethinus HOM05D003707 ORTHO05D004309 3.0e-31 139.4 154 47.4
PSO782G1937 Papaver somniferum HOM05D003707 ORTHO05D004309 6.6e-31 138.3 182 42.3
Rhsim06G0077200 Rhododendron simsii HOM05D003707 ORTHO05D004309 2.5e-30 136.3 155 46.5
Thhalv10028816m.g Eutrema salsugineum HOM05D003707 ORTHO05D004309 3.3e-30 136.0 167 44.9
Oeu029729.1 Olea europaea HOM05D003707 ORTHO05D004309 4.3e-30 135.6 149 49.0
Gohir.A05G223200 Gossypium hirsutum HOM05D003707 ORTHO05D004309 5.6e-30 135.2 159 43.4
vmacro11166 Vaccinium macrocarpon HOM05D003707 ORTHO05D004309 5.6e-30 135.2 142 48.6
Gohir.D05G225900 Gossypium hirsutum HOM05D003707 ORTHO05D004309 9.5e-30 134.4 159 43.4
Gorai.009G233400 Gossypium raimondii HOM05D003707 ORTHO05D004309 9.5e-30 134.4 159 43.4
Migut.N02874 Erythranthe guttata HOM05D003707 ORTHO05D004309 1.2e-29 134.0 158 44.9
THA.LOC104816564 Tarenaya hassleriana HOM05D003707 ORTHO05D004309 1.2e-29 134.0 152 48.0
MSTRG.22171 Avicennia marina HOM05D003707 ORTHO05D004309 1.6e-29 133.7 164 43.9
BcaB02g06540 Brassica carinata HOM05D003707 ORTHO05D004309 3.6e-29 132.5 149 43.0
AT1G14680 Arabidopsis thaliana HOM05D003707 ORTHO05D004309 4.7e-29 132.1 124 54.8
ECA247G2086 Erigeron canadensis HOM05D003707 ORTHO05D004309 4.7e-29 132.1 150 46.0
Sed0001081 Sechium edule HOM05D003707 ORTHO05D004309 4.7e-29 132.1 154 46.1
ECA246G0538 Erigeron canadensis HOM05D003707 ORTHO05D004309 1.8e-28 130.2 170 45.9
MD08G1190000 Malus domestica HOM05D003707 ORTHO05D004309 1.8e-28 130.2 124 54.0
CiPaw.16G032500 Carya illinoinensis HOM05D003707 ORTHO05D004309 2.4e-28 129.8 154 45.5
Prupe.1G524200 Prunus persica HOM05D003707 ORTHO05D004309 3.1e-28 129.4 124 54.0
PGSC0003DMG400030841 Solanum tuberosum HOM05D003707 ORTHO05D004309 3.1e-28 129.4 174 43.7
MD15G1377500 Malus domestica HOM05D003707 ORTHO05D004309 8.9e-28 127.9 119 55.5
A09p29580 Brassica napus HOM05D003707 ORTHO05D004309 1.2e-27 127.5 159 47.8
BraA09t38526Z Brassica rapa HOM05D003707 ORTHO05D004309 1.2e-27 127.5 159 47.8
EL10Ac1g01138 Beta vulgaris HOM05D003707 ORTHO05D004309 2.0e-27 126.7 148 45.9
CARHR260110 Cardamine hirsuta HOM05D003707 ORTHO05D004309 2.0e-27 126.7 167 42.5
Gohir.D06G033800 Gossypium hirsutum HOM05D003707 ORTHO05D004309 2.0e-27 126.7 127 48.0
Gorai.010G037300 Gossypium raimondii HOM05D003707 ORTHO05D004309 2.0e-27 126.7 127 48.0
Cpa.g.sc36.188 Carica papaya HOM05D003707 ORTHO05D004309 2.6e-27 126.3 159 42.1
QL02p002269 Quercus lobata HOM05D003707 ORTHO05D004309 4.4e-27 125.6 159 44.0
GSVIVG01009092001 Vitis vinifera HOM05D003707 ORTHO05D004309 4.4e-27 125.6 124 53.2
BcaB01g02805 Brassica carinata HOM05D003707 ORTHO05D004309 9.9e-27 124.4 202 40.1
C05p12640 Brassica napus HOM05D003707 ORTHO05D004309 1.3e-26 124.0 119 50.4
PSO063G2842 Papaver somniferum HOM05D003707 ORTHO05D004309 1.7e-26 123.6 182 39.6
ClCG11G014370 Citrullus lanatus HOM05D003707 ORTHO05D004309 2.2e-26 123.2 124 48.4
Aa31LG9G14730 Aethionema arabicum HOM05D003707 ORTHO05D004309 2.9e-26 122.9 165 42.4
Lsat_1_v5_gn_6_105560 Lactuca sativa HOM05D003707 ORTHO05D004309 2.9e-26 122.9 154 44.2
RcHm_v2.0_Chr3g0481851 Rosa chinensis HOM05D003707 ORTHO05D004309 3.8e-26 122.5 143 47.6
Thhalv10008342m.g Eutrema salsugineum HOM05D003707 ORTHO05D004309 4.9e-26 122.1 124 49.2
HanXRQChr17g0556331 Helianthus annuus HOM05D003707 ORTHO05D004309 4.9e-26 122.1 148 45.3
BraA06t24253Z Brassica rapa HOM05D003707 ORTHO05D004309 6.4e-26 121.7 162 40.7
HanXRQChr05g0163201 Helianthus annuus HOM05D003707 ORTHO05D004309 1.1e-25 120.9 197 39.6
SalBow2G0015 Salvia bowleyana HOM05D003707 ORTHO05D004309 1.9e-25 120.2 123 49.6
SalBow2G2952 Salvia bowleyana HOM05D003707 ORTHO05D004309 1.9e-25 120.2 123 49.6
FAN13G1833 Fragaria x ananassa HOM05D003707 ORTHO05D004309 2.4e-25 119.8 124 50.8
Sp6g08460 Schrenkiella parvula HOM05D003707 ORTHO05D004309 2.4e-25 119.8 167 40.7
CsaV3_3G047770 Cucumis sativus L. HOM05D003707 ORTHO05D004309 3.2e-25 119.4 124 46.0
FAN04G1986 Fragaria x ananassa HOM05D003707 ORTHO05D004309 3.2e-25 119.4 124 50.8
Thecc.08G101000 Theobroma cacao HOM05D003707 ORTHO05D004309 3.2e-25 119.4 159 41.5
MELO3C003545.2 Cucumis melo HOM05D003707 ORTHO05D004309 4.2e-25 119.0 165 39.4
RcHm_v2.0_Chr7g0238321 Rosa chinensis HOM05D003707 ORTHO05D004309 4.2e-25 119.0 119 51.3
Actinidia29599 Actinidia chinensis HOM05D003707 ORTHO05D004309 5.4e-25 118.6 159 42.8
FvH4_5g36300 Fragaria vesca HOM05D003707 ORTHO05D004309 7.1e-25 118.2 124 50.0
FAN18G3842 Fragaria x ananassa HOM05D003707 ORTHO05D004309 7.1e-25 118.2 124 50.0
Lalb_Chr11g0065241 Lupinus albus HOM05D003707 ORTHO05D004309 9.2e-25 117.9 142 46.5
A06p10740 Brassica napus HOM05D003707 ORTHO05D004309 1.2e-24 117.5 162 40.1
BraA03t12047Z Brassica rapa HOM05D003707 ORTHO05D004309 1.2e-24 117.5 148 45.9
Cc00_g22270 Coffea canephora HOM05D003707 ORTHO05D004309 1.6e-24 117.1 154 40.3
Manes.18G063100 Manihot esculenta HOM05D003707 ORTHO05D004309 2.7e-24 116.3 200 38.5
DCAR_005285 Daucus carota HOM05D003707 ORTHO05D004309 6.0e-24 115.2 123 45.5
Glyma.06G100100 Glycine max HOM05D003707 ORTHO05D004309 1.3e-23 114.0 143 42.7
Potri.002G101400 Populus trichocarpa HOM05D003707 ORTHO05D004309 1.7e-23 113.6 200 38.5
Ciclev10001810m.g Citrus clementina HOM05D003707 ORTHO05D004309 3.0e-23 112.8 148 44.6
Dinv07080 Davidia involucrata HOM05D003707 ORTHO05D004309 3.0e-23 112.8 124 50.0
Glyma.02G209600 Glycine max HOM05D003707 ORTHO05D004309 3.9e-23 112.5 167 41.3
Sp1g13060 Schrenkiella parvula HOM05D003707 ORTHO05D004309 3.9e-23 112.5 155 40.0
VMungo1309G1468 Vigna mungo HOM05D003707 ORTHO05D004309 8.7e-23 111.3 166 39.2
Duzib114G0708 Durio zibethinus HOM05D003707 ORTHO05D004309 1.1e-22 110.9 152 40.8
Sabra02G0079500 Salix brachista HOM05D003707 ORTHO05D004309 1.1e-22 110.9 157 42.0
RcHm_v2.0_Chr5g0049351 Rosa chinensis HOM05D003707 ORTHO05D004309 1.5e-22 110.5 148 47.3
Sed0003858 Sechium edule HOM05D003707 ORTHO05D004309 1.5e-22 110.5 160 41.2
TPR.G12497 Trifolium pratense HOM05D003707 ORTHO05D004309 1.5e-22 110.5 153 39.2
unitig_578.g16186 Utricularia gibba HOM05D003707 ORTHO05D004309 3.3e-22 109.4 150 41.3
Peaxi162Scf00139g00014 Petunia axillaris HOM05D003707 ORTHO05D004309 4.3e-22 109.0 181 40.9
unitig_8.g4846 Utricularia gibba HOM05D003707 ORTHO05D004309 4.3e-22 109.0 150 41.3
Carub.0001s1444 Capsella rubella HOM05D003707 ORTHO05D004309 1.6e-21 107.1 124 46.8
Glyma.04G098500 Glycine max HOM05D003707 ORTHO05D004309 2.8e-21 106.3 143 42.0
BcaC05g25387 Brassica carinata HOM05D003707 ORTHO05D004309 3.6e-21 105.9 119 45.4
A03p28420 Brassica napus HOM05D003707 ORTHO05D004309 8.1e-21 104.8 124 46.8
AL6G41440 Arabidopsis lyrata HOM05D003707 ORTHO05D004309 1.1e-20 104.4 166 38.6
Glyma.14G177700 Glycine max HOM05D003707 ORTHO05D004309 1.1e-20 104.4 195 39.0
CARHR015180 Cardamine hirsuta HOM05D003707 ORTHO05D004309 1.4e-20 104.0 119 47.1
Atru.chr13.1112 Acer truncatum HOM05D003707 ORTHO05D004309 2.4e-20 103.2 202 37.1
AL1G26650 Arabidopsis lyrata HOM05D003707 ORTHO05D004309 2.4e-20 103.2 122 47.5
BcaC01g04732 Brassica carinata HOM05D003707 ORTHO05D004309 2.4e-20 103.2 124 46.0
Nn4g24800 Nelumbo nucifera HOM05D003707 ORTHO05D004309 2.4e-20 103.2 183 37.7
MBI03_g47917_MAGBIO Magnolia biondii HOM05D003707 ORTHO05D004309 3.1e-20 102.8 179 38.5
C03p34360 Brassica napus HOM05D003707 ORTHO05D004309 4.0e-20 102.4 124 45.2
BolC3t15746H Brassica oleracea HOM05D003707 ORTHO05D004309 4.0e-20 102.4 124 45.2
Ca_16005_v3 Cicer arietinum L. HOM05D003707 ORTHO05D004309 5.3e-20 102.1 153 37.9
Actinidia10349 Actinidia chinensis HOM05D003707 ORTHO05D004309 6.9e-20 101.7 122 46.7
ATR0618G286 Amborella trichopoda HOM05D003707 ORTHO05D004309 9.0e-20 101.3 191 33.5
AT4G09060 Arabidopsis thaliana HOM05D003707 ORTHO05D004309 9.0e-20 101.3 121 45.5
Psat2g069400 Pisum sativum HOM05D003707 ORTHO05D004309 2.0e-19 100.1 195 34.4
Hund26994 Selenicereus undatus HOM05D003707 ORTHO05D004309 2.0e-19 100.1 148 40.5
Phvul.008G177200 Phaseolus vulgaris HOM05D003707 ORTHO05D004309 2.6e-19 99.8 159 39.0
Hund16884 Selenicereus undatus HOM05D003707 ORTHO05D004309 2.6e-19 99.8 148 39.9
arahy.Tifrunner.gnm1.ann1.K5H584 Arachis hypogaea HOM05D003707 ORTHO05D004309 3.4e-19 99.4 143 40.6
VMungo0647G1227 Vigna mungo HOM05D003707 ORTHO05D004309 3.4e-19 99.4 166 36.1
arahy.Tifrunner.gnm1.ann1.NXYL2L Arachis hypogaea HOM05D003707 ORTHO05D004309 4.4e-19 99.0 143 40.6
SGA_v2.0_scaffold4G02188 Striga asiatica HOM05D003707 ORTHO05D004309 9.9e-19 97.8 170 38.2
Eucgr.F00380 Eucalyptus grandis HOM05D003707 ORTHO05D004309 1.7e-18 97.1 124 43.5
Carub.0006s2764 Capsella rubella HOM05D003707 ORTHO05D004309 2.2e-18 96.7 121 42.1
Phvul.009G033700 Phaseolus vulgaris HOM05D003707 ORTHO05D004309 2.2e-18 96.7 148 38.5
BcaB01g01380 Brassica carinata HOM05D003707 ORTHO05D004309 6.4e-18 95.1 199 34.7
MSTRG.24439 Avicennia marina HOM05D003707 ORTHO05D004309 8.4e-18 94.7 139 41.7
PGR031G0663 Punica granatum HOM05D003707 ORTHO05D004309 2.1e-16 90.1 167 37.7
RcHm_v2.0_Chr7g0238301 Rosa chinensis HOM05D003707 ORTHO05D004309 2.1e-16 90.1 130 43.1
HPP92_025845 Vanilla planifolia HOM05D003707 ORTHO05D004309 2.1e-16 90.1 204 32.8
Lj1g0011682 Lotus japonicus HOM05D003707 ORTHO05D004309 4.6e-16 89.0 148 36.5
HanXRQChr10g0278171 Helianthus annuus HOM05D003707 ORTHO05D004309 6.0e-16 88.6 196 33.7
MD08G1190200 Malus domestica HOM05D003707 ORTHO05D004309 6.0e-16 88.6 123 41.5
CSS0014867 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 5.1e-15 85.5 198 34.3
BolC5t30008H Brassica oleracea HOM05D000624 ORTHO05D000495 8.7e-15 84.7 71 57.7
CSS0001361 Camellia sinensis var. sinensis HOM05D003707 ORTHO05D004309 1.1e-14 84.3 198 34.3
BcaC07g41551 Brassica carinata HOM05D003707 ORTHO05D032288 1.5e-14 84.0 137 33.6
C08p45530 Brassica napus HOM05D000624 ORTHO05D000495 7.3e-14 81.6 137 33.6
BolC8t52105H Brassica oleracea HOM05D000624 ORTHO05D000495 7.3e-14 81.6 137 33.6
Lalb_Chr04g0253021 Lupinus albus HOM05D003707 ORTHO05D004309 1.6e-13 80.5 199 35.2
MD08G1189700 Malus domestica HOM05D003707 ORTHO05D004309 2.1e-13 80.1 62 56.5
Medtr3g099600 Medicago truncatula HOM05D003707 ORTHO05D004309 8.1e-13 78.2 118 40.7
EL10Ac4g09478 Beta vulgaris HOM05D029458 ORTHO05D004309 1.1e-12 77.8 75 50.7
RcHm_v2.0_Chr5g0045621 Rosa chinensis HOM05D003707 ORTHO05D004309 1.1e-12 77.8 168 35.7
Aqoxy3G04171 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 2.4e-12 76.6 178 33.1
Zm00001eb259540 Zea mays HOM05D003707 ORTHO05D004309 1.2e-11 74.3 185 30.8
Ca_16033_v3 Cicer arietinum L. HOM05D003707 ORTHO05D004309 2.0e-11 73.6 113 39.8
TPR.G6353 Trifolium pratense HOM05D003707 ORTHO05D004309 5.8e-11 72.0 126 35.7
Cpa.g.sc36.189 Carica papaya HOM05D003707 ORTHO05D004309 2.4e-09 66.6 116 34.5
Psat5g050280 Pisum sativum HOM05D003707 ORTHO05D004309 2.4e-09 66.6 108 36.1
Hma1.2p1_0526F.1_g172800 Hydrangea macrophylla HOM05D003707 ORTHO05D004309 3.5e-08 62.8 46 56.5
ClCG08G011330 Citrullus lanatus HOM05D003707 ORTHO05D004309 4.6e-08 62.4 179 29.6
Haze_21792 Corylus avellana HOM05D003707 ORTHO05D004309 1.3e-07 60.8 88 42.0
CANSAT25G0959 Cannabis sativa HOM05D003707 ORTHO05D004309 3.9e-07 59.3 153 29.4
BcaB02g06537 Brassica carinata HOM05D003707 ORTHO05D004309 3.3e-06 56.2 53 47.2
AagrBONN_evm.TU.Sc2ySwM_368.2183 Anthoceros agrestis HOM05D019185 ORTHO05D031160 9.6e-06 54.7 80 33.8


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