Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.7e-174 615.9 318 100.0
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 3.2e-64 249.6 291 48.8
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 2.1e-63 246.9 279 49.1
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 7.9e-63 245.0 289 48.4
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 3.7e-60 236.1 287 44.9
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 6.3e-60 235.3 298 45.0
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 6.3e-60 235.3 283 47.7
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 1.4e-59 234.2 290 45.5
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 5.3e-59 232.3 296 42.2
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 1.2e-58 231.1 285 44.6
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 1.2e-58 231.1 290 45.5
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 1.2e-58 231.1 286 45.5
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 2.6e-58 229.9 289 46.0
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 2.6e-58 229.9 279 47.3
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 5.9e-58 228.8 287 47.7
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 1.3e-57 227.6 299 46.5
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 1.7e-57 227.3 285 46.0
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 1.7e-57 227.3 283 46.3
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 2.9e-57 226.5 286 45.5
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 2.9e-57 226.5 292 44.9
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 2.9e-57 226.5 292 43.5
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 3.8e-57 226.1 290 43.8
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 6.5e-57 225.3 280 46.4
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 6.5e-57 225.3 254 50.4
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 8.5e-57 224.9 286 44.8
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 8.5e-57 224.9 294 44.9
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.4e-56 224.2 280 46.1
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 2.5e-56 223.4 288 44.8
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 5.5e-56 222.2 287 45.6
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 5.5e-56 222.2 287 45.6
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 5.5e-56 222.2 280 46.4
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 1.2e-55 221.1 286 45.1
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 1.2e-55 221.1 286 43.4
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 3.6e-55 219.5 287 45.3
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 3.6e-55 219.5 284 46.1
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 3.6e-55 219.5 296 42.9
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 3.6e-55 219.5 297 46.5
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 8.0e-55 218.4 290 45.2
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 1.0e-54 218.0 281 45.9
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 1.4e-54 217.6 286 43.7
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 1.4e-54 217.6 296 43.9
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 1.8e-54 217.2 284 44.4
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.8e-54 217.2 286 43.0
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 5.2e-54 215.7 294 44.2
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 1.5e-53 214.2 290 42.4
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 4.4e-53 212.6 290 42.1
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 5.7e-53 212.2 252 49.2
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 1.3e-52 211.1 271 48.7
CDE02G4589 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.8e-52 209.9 192 63.5
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 3.7e-52 209.5 285 42.8
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 6.3e-52 208.8 232 50.0
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.1e-51 208.0 286 41.3
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 2.9e-49 199.9 288 39.6
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 5.0e-49 199.1 291 43.0
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 8.5e-49 198.4 301 38.2
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.5e-48 197.6 262 43.5
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 9.4e-48 194.9 283 42.4
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 4.7e-47 192.6 291 40.2
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 6.1e-47 192.2 283 42.4
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 6.1e-47 192.2 287 41.8
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 2.3e-46 190.3 220 49.1
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 6.7e-46 188.7 283 39.9
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 8.8e-46 188.3 287 39.7
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.5e-45 187.6 286 39.9
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 3.3e-45 186.4 309 37.9
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 4.4e-45 186.0 291 39.5
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 5.7e-45 185.7 312 37.8
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 5.7e-45 185.7 299 38.8
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 5.7e-45 185.7 294 38.4
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 1.3e-44 184.5 287 39.7
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 2.8e-44 183.3 283 39.9
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 1.4e-43 181.0 292 37.7
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 1.8e-43 180.6 283 39.6
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 4.1e-43 179.5 282 37.9
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 5.3e-43 179.1 269 39.0
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 2.7e-42 176.8 282 38.7
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 7.7e-42 175.3 282 38.7
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 1.3e-41 174.5 279 37.6
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 5.5e-40 169.1 255 41.2
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 6.8e-38 162.2 284 33.1
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 3.1e-35 153.3 283 36.7
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 4.1e-35 152.9 206 43.2
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 1.7e-33 147.5 289 31.1
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 8.0e-31 138.7 256 31.2
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 2.6e-29 133.7 120 55.8
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 3.7e-28 129.8 109 59.6
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.6e-26 124.4 209 39.2
CAN.G1219.3 Capsicum annuum HOM05D005193 ORTHO05D006316 2.0e-26 124.0 110 54.5
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 2.0e-26 124.0 102 57.8
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 1.7e-25 120.9 110 53.6
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 1.1e-24 118.2 309 27.2
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 4.7e-23 112.8 118 48.3
ATR0585G123 Amborella trichopoda HOM05D005193 ORTHO05D006316 1.0e-22 111.7 104 53.8
SalBow8G4471 Salvia bowleyana HOM05D005193 ORTHO05D006316 8.9e-22 108.6 169 37.3
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 4.1e-19 99.8 201 34.3
Peaxi162Scf00660g00119 Petunia axillaris HOM05D005193 ORTHO05D006316 9.2e-19 98.6 166 39.8
ATR0585G071 Amborella trichopoda HOM05D005193 ORTHO05D006316 1.9e-16 90.9 118 40.7
Cpa.g.sc12.275 Carica papaya HOM05D005193 ORTHO05D006316 8.9e-14 82.0 92 45.7
CSS0039097 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.7e-12 77.8 86 48.8
CSS0028155 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 8.3e-12 75.5 81 49.4
Aqoxy4G00029 Aquilegia oxysepala HOM05D002071 ORTHO05D002109 1.4e-11 74.7 92 40.2
SEGI_35263 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 7.8e-10 68.9 54 53.7
arahy.Tifrunner.gnm1.ann1.BLY3DW Arachis hypogaea HOM05D005193 ORTHO05D006316 1.0e-09 68.6 109 34.9


User provided reference genes

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