Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0223 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 1.2e-46 189.5 94 100.0
CDE09G1390 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 1.8e-39 165.6 83 97.6
MBI07_g22384_MAGBIO Magnolia biondii HOM05D000834 ORTHO05D006956 1.1e-33 146.4 81 87.7
ATR0787G052 Amborella trichopoda HOM05D000834 ORTHO05D006956 4.3e-33 144.4 83 83.1
Atru.chr5.1869 Acer truncatum HOM05D000834 ORTHO05D006956 1.3e-32 142.9 81 86.4
Nn1g03003 Nelumbo nucifera HOM05D000834 ORTHO05D006956 1.6e-32 142.5 82 85.4
PGR044G1351 Punica granatum HOM05D000834 ORTHO05D006956 1.6e-32 142.5 81 82.7
Potri.014G193300 Populus trichocarpa HOM05D000834 ORTHO05D006956 1.4e-31 139.4 81 84.0
Eucgr.K01422 Eucalyptus grandis HOM05D000834 ORTHO05D006956 2.4e-31 138.7 81 82.7
THA.LOC104820067 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 9.0e-31 136.7 80 78.8
Phvul.007G153700 Phaseolus vulgaris HOM05D000834 ORTHO05D006956 2.0e-30 135.6 81 79.0
ClCG06G001380 Citrullus lanatus HOM05D000834 ORTHO05D006956 3.4e-30 134.8 81 82.7
Sed0018887 Sechium edule HOM05D000834 ORTHO05D006956 3.4e-30 134.8 81 79.0
Cpa.g.sc87.39 Carica papaya HOM05D000834 ORTHO05D006956 4.5e-30 134.4 80 78.8
Gorai.007G150200 Gossypium raimondii HOM05D000834 ORTHO05D006956 5.8e-30 134.0 81 77.8
arahy.Tifrunner.gnm1.ann1.G250MW Arachis hypogaea HOM05D000834 ORTHO05D006956 7.6e-30 133.7 81 79.0
arahy.Tifrunner.gnm1.ann1.WYWU3M Arachis hypogaea HOM05D000834 ORTHO05D006956 7.6e-30 133.7 81 79.0
Manes.12G038400 Manihot esculenta HOM05D000834 ORTHO05D006956 9.9e-30 133.3 79 78.5
CiPaw.03G271600 Carya illinoinensis HOM05D000834 ORTHO05D006956 1.3e-29 132.9 81 79.0
Lj5g0006902 Lotus japonicus HOM05D000834 ORTHO05D006956 1.3e-29 132.9 81 79.0
VMungo0720G2048 Vigna mungo HOM05D000834 ORTHO05D006956 1.3e-29 132.9 81 77.8
Cfa002491 Carpinus fangiana HOM05D000834 ORTHO05D006956 1.7e-29 132.5 81 77.8
Lalb_Chr02g0152761 Lupinus albus HOM05D000834 ORTHO05D006956 1.7e-29 132.5 81 76.5
Potri.002G255900 Populus trichocarpa HOM05D000834 ORTHO05D006956 1.7e-29 132.5 81 76.5
THA.LOC104814534 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 1.7e-29 132.5 78 78.2
Haze_24714 Corylus avellana HOM05D000834 ORTHO05D006956 2.2e-29 132.1 81 76.5
Gohir.A11G133900 Gossypium hirsutum HOM05D000834 ORTHO05D006956 2.2e-29 132.1 81 76.5
Gohir.D11G140000 Gossypium hirsutum HOM05D000834 ORTHO05D006956 2.2e-29 132.1 81 76.5
Thecc.01G249300 Theobroma cacao HOM05D000834 ORTHO05D006956 2.2e-29 132.1 81 75.3
Duzib138G0050 Durio zibethinus HOM05D000834 ORTHO05D006956 2.9e-29 131.7 81 76.5
Sabra02G0194500 Salix brachista HOM05D000834 ORTHO05D006956 2.9e-29 131.7 81 77.8
CsaV3_6G007320 Cucumis sativus L. HOM05D000834 ORTHO05D006956 3.8e-29 131.3 81 80.2
Glyma.13G127400 Glycine max HOM05D000834 ORTHO05D006956 3.8e-29 131.3 81 77.8
Manes.13G039100 Manihot esculenta HOM05D000834 ORTHO05D006956 3.8e-29 131.3 79 77.2
TWI12G0869 Tripterygium wilfordii HOM05D000834 ORTHO05D006956 3.8e-29 131.3 85 71.8
TAR362G0351 Trochodendron aralioides HOM05D000834 ORTHO05D006956 3.8e-29 131.3 81 75.3
Migut.D00483 Erythranthe guttata HOM05D000834 ORTHO05D006956 4.9e-29 131.0 81 76.5
Os02g0816800 Oryza sativa ssp. japonica HOM05D000834 ORTHO05D006956 8.4e-29 130.2 80 75.0
Rhsim01G0259900 Rhododendron simsii HOM05D000834 ORTHO05D006956 8.4e-29 130.2 79 79.7
Hund05490 Selenicereus undatus HOM05D000834 ORTHO05D006956 8.4e-29 130.2 81 76.5
GSVIVG01028438001 Vitis vinifera HOM05D000834 ORTHO05D006956 8.4e-29 130.2 85 75.3
SGA_v2.0_scaffold1G00665 Striga asiatica HOM05D000121 ORTHO05D000102 1.1e-28 129.8 81 74.1
CSS0037788 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.4e-28 129.4 81 77.8
CSS0050145 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.4e-28 129.4 81 77.8
Ciclev10020464m.g Citrus clementina HOM05D000834 ORTHO05D006956 1.4e-28 129.4 81 74.1
Actinidia09509 Actinidia chinensis HOM05D000834 ORTHO05D006956 1.9e-28 129.0 86 73.3
Sc05g0002850 Simmondsia chinensis HOM05D000834 ORTHO05D006956 1.9e-28 129.0 81 75.3
Ca_09644_v3 Cicer arietinum L. HOM05D000834 ORTHO05D006956 2.5e-28 128.6 81 72.8
Cc01_g17740 Coffea canephora HOM05D000834 ORTHO05D006956 2.5e-28 128.6 81 74.1
PSO832G2974 Papaver somniferum HOM05D000834 ORTHO05D006956 2.5e-28 128.6 79 78.5
Lalb_Chr06g0170741 Lupinus albus HOM05D000834 ORTHO05D006956 3.2e-28 128.3 81 74.1
vmacro14792 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 4.2e-28 127.9 79 78.5
SalBow4G1359 Salvia bowleyana HOM05D000834 ORTHO05D006956 5.5e-28 127.5 86 68.6
TPR.G5902 Trifolium pratense HOM05D000834 ORTHO05D006956 5.5e-28 127.5 81 74.1
PSO764G0197 Papaver somniferum HOM05D000834 ORTHO05D006956 9.3e-28 126.7 79 77.2
Psat6g062480 Pisum sativum HOM05D000834 ORTHO05D006956 1.2e-27 126.3 81 71.6
Dinv19263 Davidia involucrata HOM05D000834 ORTHO05D006956 1.6e-27 125.9 81 74.1
FvH4_2g20370 Fragaria vesca HOM05D000834 ORTHO05D006956 1.6e-27 125.9 81 74.1
FAN24G3261 Fragaria x ananassa HOM05D000834 ORTHO05D006956 1.6e-27 125.9 81 74.1
RcHm_v2.0_Chr6g0286481 Rosa chinensis HOM05D000834 ORTHO05D006956 1.6e-27 125.9 81 74.1
unitig_22.g6307 Utricularia gibba HOM05D000834 ORTHO05D006956 1.6e-27 125.9 79 75.9
Medtr1g069455 Medicago truncatula HOM05D000834 ORTHO05D006956 2.7e-27 125.2 81 71.6
MSTRG.18357 Avicennia marina HOM05D000834 ORTHO05D006956 3.5e-27 124.8 81 72.8
Prupe.8G214700 Prunus persica HOM05D000834 ORTHO05D006956 3.5e-27 124.8 81 74.1
DCAR_004694 Daucus carota HOM05D000834 ORTHO05D006956 6.0e-27 124.0 79 73.4
FAN15G3585 Fragaria x ananassa HOM05D000834 ORTHO05D006956 6.0e-27 124.0 80 72.5
QL09p041638 Quercus lobata HOM05D000834 ORTHO05D006956 6.0e-27 124.0 81 72.8
Aqoxy5G00122 Aquilegia oxysepala HOM05D000834 ORTHO05D006956 7.9e-27 123.6 84 71.4
COL.COLO4_02902 Corchorus olitorius HOM05D000834 ORTHO05D006956 7.9e-27 123.6 81 72.8
Oeu052085.1 Olea europaea HOM05D000834 ORTHO05D006956 7.9e-27 123.6 81 72.8
MELO3C022394.2 Cucumis melo HOM05D000834 ORTHO05D006956 1.0e-26 123.2 76 77.6
AT2G20360 Arabidopsis thaliana HOM05D000834 ORTHO05D006956 1.3e-26 122.9 80 68.8
SEGI_11456 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 1.3e-26 122.9 79 70.9
BcaB07g31592 Brassica carinata HOM05D000834 ORTHO05D006956 1.8e-26 122.5 80 68.8
BcaB08g34904 Brassica carinata HOM05D000834 ORTHO05D006956 1.8e-26 122.5 80 68.8
BcaC04g22796 Brassica carinata HOM05D000834 ORTHO05D006956 1.8e-26 122.5 80 68.8
BcaC07g41219 Brassica carinata HOM05D000834 ORTHO05D006956 1.8e-26 122.5 80 68.8
A07p00360 Brassica napus HOM05D000834 ORTHO05D000909 1.8e-26 122.5 80 68.8
A09p12840 Brassica napus HOM05D000834 ORTHO05D006956 1.8e-26 122.5 80 68.8
A09p58940 Brassica napus HOM05D000834 ORTHO05D006956 1.8e-26 122.5 80 68.8
C08p42260 Brassica napus HOM05D000834 ORTHO05D006956 1.8e-26 122.5 80 68.8
C09p15230 Brassica napus HOM05D000834 ORTHO05D006956 1.8e-26 122.5 80 68.8
BolC8t51785H Brassica oleracea HOM05D000834 ORTHO05D006956 1.8e-26 122.5 80 68.8
BolC9t54430H Brassica oleracea HOM05D000834 ORTHO05D006956 1.8e-26 122.5 80 68.8
BraA07t27827Z Brassica rapa HOM05D000834 ORTHO05D006956 1.8e-26 122.5 80 68.8
BraA09t41279Z Brassica rapa HOM05D000834 ORTHO05D006956 1.8e-26 122.5 80 68.8
MD05G1187700 Malus domestica HOM05D000834 ORTHO05D006956 1.8e-26 122.5 81 70.4
HPP92_020769 Vanilla planifolia HOM05D000834 ORTHO05D006956 2.3e-26 122.1 81 70.4
Carub.0003s3474 Capsella rubella HOM05D000834 ORTHO05D006956 3.0e-26 121.7 80 68.8
Lj1C74T17 Lonicera japonica HOM05D000834 ORTHO05D006956 3.0e-26 121.7 81 74.1
Sp3g33600 Schrenkiella parvula HOM05D000834 ORTHO05D006956 3.9e-26 121.3 80 67.5
CANSAT01G0496 Cannabis sativa HOM05D000834 ORTHO05D006956 5.1e-26 120.9 81 70.4
CANSAT01G1591 Cannabis sativa HOM05D000834 ORTHO05D006956 5.1e-26 120.9 81 70.4
Lsat_1_v5_gn_5_181100 Lactuca sativa HOM05D000834 ORTHO05D006956 5.1e-26 120.9 81 69.1
AL3G53320 Arabidopsis lyrata HOM05D000834 ORTHO05D006956 6.7e-26 120.6 80 67.5
CARHR110880 Cardamine hirsuta HOM05D000834 ORTHO05D006956 6.7e-26 120.6 80 66.2
BcaB03g16828 Brassica carinata HOM05D000834 ORTHO05D006956 8.7e-26 120.2 77 70.1
Thhalv10002002m.g Eutrema salsugineum HOM05D000834 ORTHO05D006956 8.7e-26 120.2 78 67.9
MD10G1175400 Malus domestica HOM05D000834 ORTHO05D006956 1.1e-25 119.8 81 69.1
MD15G1374200 Malus domestica HOM05D000834 ORTHO05D006956 1.1e-25 119.8 81 69.1
BcaC06g36723 Brassica carinata HOM05D000834 ORTHO05D006956 1.5e-25 119.4 80 67.5
C07p00720 Brassica napus HOM05D000834 ORTHO05D006956 1.5e-25 119.4 80 67.5
BolC7t40517H Brassica oleracea HOM05D000834 ORTHO05D006956 1.5e-25 119.4 80 67.5
CSS0005533 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.5e-25 119.4 80 70.0
ECA248G1156 Erigeron canadensis HOM05D000121 ORTHO05D000102 1.5e-25 119.4 85 65.9
HanXRQChr01g0014941 Helianthus annuus HOM05D000834 ORTHO05D006956 2.5e-25 118.6 81 66.7
Solyc09g064450.3 Solanum lycopersicum HOM05D000834 ORTHO05D006956 7.4e-25 117.1 81 67.9
Aa31LG8G17350 Aethionema arabicum HOM05D000834 ORTHO05D006956 9.6e-25 116.7 80 63.8
Sopen09g025590 Solanum pennellii HOM05D000834 ORTHO05D006956 9.6e-25 116.7 81 66.7
AUR62008805 Chenopodium quinoa HOM05D000834 ORTHO05D006956 1.6e-24 115.9 84 66.7
Peaxi162Scf00043g00251 Petunia axillaris HOM05D000834 ORTHO05D006956 1.6e-24 115.9 81 66.7
BraA09t36931Z Brassica rapa HOM05D000834 ORTHO05D006956 2.1e-24 115.5 75 70.7
AUR62025434 Chenopodium quinoa HOM05D000834 ORTHO05D006956 2.1e-24 115.5 81 66.7
Ah.08g213640 Amaranthus hybridus HOM05D000834 ORTHO05D006956 3.7e-24 114.8 77 72.7
Nitab4.5_0000385g0020 Nicotiana tabacum HOM05D000834 ORTHO05D006956 3.1e-23 111.7 75 69.3
Nitab4.5_0002435g0060 Nicotiana tabacum HOM05D000834 ORTHO05D006956 5.3e-23 110.9 91 58.2
SHI26740 Sapria himalayana HOM05D000834 ORTHO05D006956 7.1e-20 100.5 119 45.4
AagrBONN_evm.TU.Sc2ySwM_368.182 Anthoceros agrestis HOM05D000834 ORTHO05D006956 3.0e-18 95.1 74 59.5
CBR_g12802 Chara braunii HOM05D000834 ORTHO05D006956 8.7e-18 93.6 78 51.3
Mapoly0051s0097 Marchantia polymorpha HOM05D000834 ORTHO05D006956 5.9e-14 80.9 79 53.2
Pp3c1_35920 Physcomitrium patens HOM05D000834 ORTHO05D006956 1.0e-10 70.1 78 41.0
Pp3c14_9070 Physcomitrium patens HOM05D000834 ORTHO05D006956 2.3e-10 68.9 78 42.3
SMO119G0351 Selaginella moellendorffii HOM05D000834 ORTHO05D006956 8.8e-10 67.0 73 50.7
FAN27G0744 Fragaria x ananassa HOM05D000834 ORTHO05D006956 4.8e-08 61.2 40 75.0
MCO13G055 Micromonas commoda HOM05D000834 ORTHO05D006956 1.8e-07 59.3 69 42.0


User provided reference genes

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