Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 1.7e-174 615.9 310 100.0
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 1.8e-88 330.1 233 71.2
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 3.1e-88 329.3 235 70.2
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 1.5e-87 327.0 254 65.4
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.5e-87 327.0 235 68.9
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 3.4e-87 325.9 225 74.2
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 4.5e-87 325.5 225 70.7
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 5.9e-87 325.1 228 71.1
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 1.7e-86 323.6 282 62.4
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 1.7e-86 323.6 225 72.0
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 2.2e-86 323.2 228 70.6
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 8.5e-86 321.2 228 71.1
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 8.5e-86 321.2 235 68.5
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 3.2e-85 319.3 221 71.9
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 3.2e-85 319.3 223 70.0
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 4.2e-85 318.9 243 64.6
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 7.2e-85 318.2 225 69.8
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 9.4e-85 317.8 240 68.3
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 2.1e-84 316.6 225 69.8
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 3.6e-84 315.8 264 62.5
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 1.4e-83 313.9 260 62.3
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 3.0e-83 312.8 244 64.8
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 3.9e-83 312.4 231 67.5
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 3.9e-83 312.4 221 71.5
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 5.2e-83 312.0 230 69.6
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 6.7e-83 311.6 249 63.5
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 8.8e-83 311.2 231 66.7
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 1.1e-82 310.8 225 66.7
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 1.5e-82 310.5 225 69.8
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 2.0e-82 310.1 260 64.2
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 2.6e-82 309.7 260 62.3
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 4.4e-82 308.9 221 70.6
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 5.7e-82 308.5 224 68.3
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.3e-81 307.4 222 65.8
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 1.3e-81 307.4 218 67.4
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 1.7e-81 307.0 225 67.6
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 2.2e-81 306.6 226 64.6
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 2.8e-81 306.2 261 61.3
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 2.8e-81 306.2 251 62.2
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 3.7e-81 305.8 226 65.9
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 3.7e-81 305.8 228 67.1
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 4.8e-81 305.4 213 69.5
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 4.8e-81 305.4 237 65.8
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 6.3e-81 305.1 222 65.8
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 6.3e-81 305.1 226 66.8
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 8.2e-81 304.7 237 65.4
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 1.4e-80 303.9 202 73.3
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 1.4e-80 303.9 245 62.4
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 1.4e-80 303.9 229 65.1
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 1.4e-80 303.9 225 65.8
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 2.4e-80 303.1 258 62.4
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 2.4e-80 303.1 222 65.3
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 2.4e-80 303.1 222 65.3
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 2.4e-80 303.1 227 66.5
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 3.1e-80 302.8 271 60.1
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 4.1e-80 302.4 235 63.4
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 4.1e-80 302.4 233 63.1
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 4.1e-80 302.4 228 64.9
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 7.0e-80 301.6 225 65.8
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 2.0e-79 300.1 233 62.7
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 3.5e-79 299.3 227 66.5
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 5.9e-79 298.5 225 64.4
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 1.3e-78 297.4 219 64.8
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 1.3e-78 297.4 261 60.9
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 1.7e-78 297.0 226 65.9
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 2.2e-78 296.6 255 60.8
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 5.0e-78 295.4 226 66.4
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 6.5e-78 295.0 269 58.0
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 1.1e-77 294.3 223 65.5
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 2.5e-77 293.1 198 72.7
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 2.5e-77 293.1 204 68.6
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 3.2e-77 292.7 259 61.8
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 7.2e-77 291.6 225 64.9
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 7.2e-77 291.6 193 72.0
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 1.2e-76 290.8 220 67.7
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 1.6e-76 290.4 257 60.7
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 1.6e-76 290.4 227 65.6
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 1.6e-76 290.4 222 67.1
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 2.1e-76 290.0 204 67.2
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 2.7e-76 289.7 226 65.5
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 6.1e-76 288.5 222 66.7
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 1.4e-75 287.3 261 60.5
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 1.4e-75 287.3 261 60.9
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 1.4e-75 287.3 261 60.9
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 1.4e-75 287.3 231 63.6
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 3.0e-75 286.2 261 60.2
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 3.0e-75 286.2 223 66.4
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 5.2e-75 285.4 222 65.8
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 5.2e-75 285.4 253 59.7
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 8.8e-75 284.6 222 64.4
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 2.6e-74 283.1 222 65.3
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 3.1e-72 276.2 234 60.7
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 5.3e-72 275.4 222 63.5
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 3.5e-71 272.7 238 58.8
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 1.9e-69 266.9 251 58.2
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 5.5e-69 265.4 228 63.2
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 6.8e-67 258.5 176 71.6
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.1e-64 251.1 230 52.6
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 2.0e-63 246.9 207 60.9
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 1.3e-62 244.2 227 57.7
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 1.7e-62 243.8 224 58.9
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.0e-59 234.6 237 49.8
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 2.6e-58 229.9 215 54.9
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 3.1e-56 223.0 230 49.6
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 7.0e-56 221.9 225 49.3
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 1.0e-54 218.0 191 59.7
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 7.3e-53 211.8 145 73.1
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 2.0e-47 193.7 206 50.0
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 9.5e-45 184.9 161 55.3
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 1.6e-39 167.5 114 73.7
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.3e-22 111.3 110 57.3
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 1.6e-20 104.4 191 34.6
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 6.4e-17 92.4 186 33.3
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 4.2e-16 89.7 62 66.1
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 4.2e-16 89.7 62 66.1
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 2.9e-09 67.0 181 29.3
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 8.4e-09 65.5 39 79.5


User provided reference genes

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