Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0092 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 1.3e-196 689.5 344 100.0
TAR628G0064 Trochodendron aralioides HOM05D006147 ORTHO05D007501 4.6e-133 478.4 347 68.0
COL.COLO4_26048 Corchorus olitorius HOM05D006147 ORTHO05D007501 3.0e-132 475.7 343 69.4
TPR.G28159 Trifolium pratense HOM05D006147 ORTHO05D007501 3.9e-132 475.3 345 66.7
Aqoxy6G02357 Aquilegia oxysepala HOM05D006147 ORTHO05D007501 8.7e-132 474.2 351 68.7
Gohir.A03G199400 Gossypium hirsutum HOM05D006147 ORTHO05D007501 1.5e-131 473.4 345 69.3
Glyma.11G110000 Glycine max HOM05D006147 ORTHO05D007501 5.6e-131 471.5 346 68.5
PGSC0003DMG402031287 Solanum tuberosum HOM05D006147 ORTHO05D007501 5.6e-131 471.5 350 67.4
SalBow3G3875 Salvia bowleyana HOM05D006147 ORTHO05D007501 7.4e-131 471.1 344 69.2
Solyc09g091970.4 Solanum lycopersicum HOM05D006147 ORTHO05D007501 1.3e-130 470.3 350 67.1
GSVIVG01024169001 Vitis vinifera HOM05D006147 ORTHO05D007501 1.6e-130 469.9 349 67.0
TWI31G1450 Tripterygium wilfordii HOM05D006147 ORTHO05D007501 2.1e-130 469.5 347 67.4
PSO210G6769 Papaver somniferum HOM05D006147 ORTHO05D007501 3.7e-130 468.8 355 65.6
Sopen09g034870 Solanum pennellii HOM05D006147 ORTHO05D007501 3.7e-130 468.8 350 66.9
VMungo1127G0575 Vigna mungo HOM05D006147 ORTHO05D007501 3.7e-130 468.8 345 67.5
Cfa005114 Carpinus fangiana HOM05D006147 ORTHO05D007501 4.8e-130 468.4 345 68.4
Gohir.D02G220700 Gossypium hirsutum HOM05D006147 ORTHO05D007501 6.2e-130 468.0 345 68.7
Medtr4g072040 Medicago truncatula HOM05D006147 ORTHO05D007501 6.2e-130 468.0 346 66.2
Atru.chr5.3146 Acer truncatum HOM05D006147 ORTHO05D007501 8.1e-130 467.6 348 67.2
Cpa.g.sc150.15 Carica papaya HOM05D006147 ORTHO05D007501 8.1e-130 467.6 345 67.8
Migut.N01278 Erythranthe guttata HOM05D006147 ORTHO05D007501 2.4e-129 466.1 345 67.8
Peaxi162Scf00684g00123 Petunia axillaris HOM05D006147 ORTHO05D007501 6.9e-129 464.5 306 74.2
Lalb_Chr03g0025341 Lupinus albus HOM05D006147 ORTHO05D007501 9.0e-129 464.2 344 67.7
Eucgr.G01732 Eucalyptus grandis HOM05D006147 ORTHO05D007501 1.2e-128 463.8 343 66.2
vmacro17420 Vaccinium macrocarpon HOM05D006147 ORTHO05D007501 1.5e-128 463.4 372 64.2
CSS0016386 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 2.0e-128 463.0 302 75.2
QL11p046465 Quercus lobata HOM05D006147 ORTHO05D007501 2.0e-128 463.0 345 67.2
CSS0033675 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 2.6e-128 462.6 302 75.2
Thecc.02G074800 Theobroma cacao HOM05D006147 ORTHO05D007501 2.6e-128 462.6 345 68.1
AUR62016834 Chenopodium quinoa HOM05D006147 ORTHO05D007501 5.8e-128 461.5 349 66.5
CAN.G1635.6 Capsicum annuum HOM05D006147 ORTHO05D007501 7.6e-128 461.1 342 67.0
EL10Ac9g21633 Beta vulgaris HOM05D006147 ORTHO05D007501 1.3e-127 460.3 349 67.9
CANSAT11G2690 Cannabis sativa HOM05D006147 ORTHO05D007501 1.7e-127 459.9 345 66.1
Potri.009G124800 Populus trichocarpa HOM05D006147 ORTHO05D007501 1.7e-127 459.9 346 67.3
Lj3g0027328 Lotus japonicus HOM05D006147 ORTHO05D007501 2.2e-127 459.5 345 66.4
MD10G1062800 Malus domestica HOM05D006147 ORTHO05D007501 3.8e-127 458.8 345 67.5
arahy.Tifrunner.gnm1.ann1.S6V2XE Arachis hypogaea HOM05D006147 ORTHO05D007501 6.5e-127 458.0 322 70.5
Ciclev10028728m.g Citrus clementina HOM05D006147 ORTHO05D007501 6.5e-127 458.0 349 67.0
arahy.Tifrunner.gnm1.ann1.JUX7JJ Arachis hypogaea HOM05D006147 ORTHO05D007501 8.4e-127 457.6 322 70.5
Oeu055635.1 Olea europaea HOM05D006147 ORTHO05D007501 8.4e-127 457.6 334 68.9
Sabra09G0095800 Salix brachista HOM05D006147 ORTHO05D007501 8.4e-127 457.6 354 65.5
Actinidia02248 Actinidia chinensis HOM05D006147 ORTHO05D007501 2.5e-126 456.1 304 74.3
ATR0149G025 Amborella trichopoda HOM05D006147 ORTHO05D007501 3.2e-126 455.7 348 65.2
CiPaw.05G073500 Carya illinoinensis HOM05D006147 ORTHO05D007501 4.2e-126 455.3 302 74.5
MD05G1055500 Malus domestica HOM05D006147 ORTHO05D007501 7.1e-126 454.5 343 66.5
Ca_20936_v3 Cicer arietinum L. HOM05D006147 ORTHO05D007501 1.2e-125 453.8 323 68.7
Psat7g138880 Pisum sativum HOM05D006147 ORTHO05D007501 1.6e-125 453.4 302 72.5
Glyma.12G036900 Glycine max HOM05D006147 ORTHO05D007501 7.9e-125 451.1 304 71.7
Manes.04G083100 Manihot esculenta HOM05D006147 ORTHO05D007501 7.9e-125 451.1 305 71.8
Duzib248G0035 Durio zibethinus HOM05D006147 ORTHO05D007501 2.3e-124 449.5 385 61.3
Rhsim05G0068100 Rhododendron simsii HOM05D006147 ORTHO05D007501 5.1e-124 448.4 376 61.4
RcHm_v2.0_Chr6g0267981 Rosa chinensis HOM05D006147 ORTHO05D007501 6.7e-124 448.0 345 66.1
FAN27G3378 Fragaria x ananassa HOM05D006147 ORTHO05D007501 8.7e-124 447.6 345 65.5
HPP92_002502 Vanilla planifolia HOM05D006147 ORTHO05D007501 1.5e-123 446.8 308 70.5
AL4G10420 Arabidopsis lyrata HOM05D006147 ORTHO05D007501 1.9e-123 446.4 328 66.5
THA.LOC104804110 Tarenaya hassleriana HOM05D006147 ORTHO05D007501 1.9e-123 446.4 327 67.3
AUR62010384 Chenopodium quinoa HOM05D006147 ORTHO05D007501 2.5e-123 446.0 383 61.4
Prupe.8G083600 Prunus persica HOM05D006147 ORTHO05D007501 2.5e-123 446.0 345 64.9
PGR042G0282 Punica granatum HOM05D006147 ORTHO05D007501 3.3e-123 445.7 348 64.1
Phvul.011G038600 Phaseolus vulgaris HOM05D006147 ORTHO05D007501 4.3e-123 445.3 302 71.5
CsaV3_7G000410 Cucumis sativus L. HOM05D006147 ORTHO05D007501 5.7e-123 444.9 346 65.0
Sed0012779 Sechium edule HOM05D006147 ORTHO05D007501 5.7e-123 444.9 345 64.6
CARHR112150 Cardamine hirsuta HOM05D006147 ORTHO05D007501 9.6e-123 444.1 326 66.9
AT2G21280 Arabidopsis thaliana HOM05D006147 ORTHO05D007501 1.6e-122 443.4 343 65.3
Carub.0004s0032 Capsella rubella HOM05D006147 ORTHO05D007501 2.8e-122 442.6 328 66.5
Thhalv10000221m.g Eutrema salsugineum HOM05D006147 ORTHO05D007501 6.2e-122 441.4 343 64.7
Hund00177 Selenicereus undatus HOM05D006147 ORTHO05D007501 1.1e-121 440.7 326 66.3
ECA233G5423 Erigeron canadensis HOM05D006147 ORTHO05D001140 1.4e-121 440.3 349 65.0
Aa31LG7G15210 Aethionema arabicum HOM05D006147 ORTHO05D007501 1.8e-121 439.9 343 63.6
C04p50520 Brassica napus HOM05D006147 ORTHO05D007501 4.1e-121 438.7 323 67.2
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 2.0e-120 436.4 311 67.5
Sp4g00470 Schrenkiella parvula HOM05D006147 ORTHO05D007501 2.0e-120 436.4 328 65.9
Hund00185 Selenicereus undatus HOM05D006147 ORTHO05D007501 2.0e-120 436.4 316 67.7
A04p16060 Brassica napus HOM05D006147 ORTHO05D007501 4.5e-120 435.3 323 67.2
FAN15G0109 Fragaria x ananassa HOM05D006147 ORTHO05D007501 2.2e-119 433.0 348 63.2
BcaC02g08802 Brassica carinata HOM05D006147 ORTHO05D007501 3.8e-119 432.2 323 66.3
BolC4t26650H Brassica oleracea HOM05D006147 ORTHO05D007501 3.8e-119 432.2 323 66.3
Haze_02237 Corylus avellana HOM05D006147 ORTHO05D007501 6.5e-119 431.4 391 58.8
Os02g0834700 Oryza sativa ssp. japonica HOM05D006147 ORTHO05D007501 3.9e-116 422.2 316 65.5
Gorai.005G248600 Gossypium raimondii HOM05D006147 ORTHO05D007501 8.7e-116 421.0 313 68.7
DCAR_003686 Daucus carota HOM05D006147 ORTHO05D007501 4.2e-110 402.1 280 68.2
Sc18g0005390 Simmondsia chinensis HOM05D006147 ORTHO05D007501 4.2e-110 402.1 319 64.6
ClCG02G004540 Citrullus lanatus HOM05D006147 ORTHO05D007501 7.9e-109 397.9 306 64.1
Lsat_1_v5_gn_8_127980 Lactuca sativa HOM05D006147 ORTHO05D007501 3.0e-108 396.0 353 59.8
Pp3c7_11090 Physcomitrium patens HOM05D006147 ORTHO05D007501 5.1e-108 395.2 338 55.3
Pp3c7_11100 Physcomitrium patens HOM05D006147 ORTHO05D007501 5.1e-108 395.2 338 55.3
Mapoly0021s0030 Marchantia polymorpha HOM05D006147 ORTHO05D007501 2.0e-107 393.3 303 60.7
SMO146G0042 Selaginella moellendorffii HOM05D006147 ORTHO05D007501 2.4e-105 386.3 303 60.4
Nitab4.5_0001154g0060 Nicotiana tabacum HOM05D006147 ORTHO05D007501 2.1e-101 373.2 310 61.9
Zm00001eb259680 Zea mays HOM05D006147 ORTHO05D007501 5.7e-99 365.2 272 66.5
MELO3C002785.2 Cucumis melo HOM05D006147 ORTHO05D007501 4.1e-97 359.0 296 62.8
PSO170G3006 Papaver somniferum HOM05D006147 ORTHO05D007501 1.7e-95 353.6 355 53.8
unitig_899.g15602 Utricularia gibba HOM05D006147 ORTHO05D007501 4.2e-94 349.0 291 59.5
Cc02_g16890 Coffea canephora HOM05D006147 ORTHO05D007501 3.1e-89 332.8 267 65.2
Nitab4.5_0001370g0020 Nicotiana tabacum HOM05D006147 ORTHO05D007501 4.8e-82 308.9 184 80.4
Cre05.g233305 Chlamydomonas reinhardtii HOM05D006147 ORTHO05D007501 5.9e-80 302.0 306 47.4
Dinv41999 Davidia involucrata HOM05D006147 ORTHO05D007501 7.2e-78 295.0 245 62.9
MCO05G212 Micromonas commoda HOM05D006147 ORTHO05D007501 2.1e-77 293.5 306 47.7
SGA_v2.0_scaffold80G25875 Striga asiatica HOM05D006147 ORTHO05D007501 5.9e-72 275.4 245 55.9
PRCOL_00000238 Prasinoderma coloniale HOM05D006147 ORTHO05D007501 9.8e-67 258.1 219 57.5
MCO16G248 Micromonas commoda HOM05D006147 ORTHO05D007501 1.3e-66 257.7 310 43.2
AUR62040654 Chenopodium quinoa HOM05D006147 ORTHO05D007501 8.3e-66 255.0 376 43.1
Nn6g32256 Nelumbo nucifera HOM05D006147 ORTHO05D007501 1.1e-65 254.6 235 57.0
Nn4g26316 Nelumbo nucifera HOM05D006147 ORTHO05D007501 6.4e-58 228.8 125 82.4
Nn6g32490 Nelumbo nucifera HOM05D006147 ORTHO05D007501 6.4e-58 228.8 125 82.4
arahy.Tifrunner.gnm1.ann1.B04QBU Arachis hypogaea HOM05D006147 ORTHO05D007501 1.4e-57 227.6 204 58.8
FvH4_2g10480 Fragaria vesca HOM05D006147 ORTHO05D007501 1.9e-57 227.3 226 54.9
MELO3C028749.2 Cucumis melo HOM05D006147 ORTHO05D007501 2.3e-52 210.3 228 52.6
C09p25880 Brassica napus HOM05D006147 ORTHO05D007501 1.2e-48 198.0 124 70.2
BolC9t55495H Brassica oleracea HOM05D006147 ORTHO05D007501 3.5e-48 196.4 124 69.4
CDE04G1860 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 1.9e-41 174.1 284 45.8
arahy.Tifrunner.gnm1.ann1.63XKYH Arachis hypogaea HOM05D006147 ORTHO05D007501 1.0e-39 168.3 117 70.9
arahy.Tifrunner.gnm1.ann1.KZ1FWN Arachis hypogaea HOM05D006147 ORTHO05D007501 1.7e-39 167.5 156 59.6
SEGI_33639 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 5.6e-38 162.5 104 69.2
Pp3s34_200 Physcomitrium patens HOM05D006147 ORTHO05D007501 3.0e-31 140.2 305 30.8
Cc02_g16880 Coffea canephora HOM05D006147 ORTHO05D007501 6.2e-29 132.5 79 77.2
BolC2t08257H Brassica oleracea HOM05D006147 ORTHO05D007501 3.1e-28 130.2 125 56.0
BraA07t28491Z Brassica rapa HOM05D006147 ORTHO05D007501 1.7e-26 124.4 101 61.4
arahy.Tifrunner.gnm1.ann1.UB8UIZ Arachis hypogaea HOM05D006147 ORTHO05D007501 6.0e-24 115.9 154 45.5
BcaC03g14677 Brassica carinata HOM05D006147 ORTHO05D007501 1.0e-23 115.2 117 53.8
BcaB08g34979 Brassica carinata HOM05D006147 ORTHO05D007501 1.5e-22 111.3 140 46.4
C02p21180 Brassica napus HOM05D006147 ORTHO05D007501 3.6e-21 106.7 71 66.2
A07p07030 Brassica napus HOM05D006147 ORTHO05D007501 2.4e-20 104.0 101 55.4
C02p21170 Brassica napus HOM05D006147 ORTHO05D007501 4.5e-19 99.8 150 43.3
arahy.Tifrunner.gnm1.ann1.PBTS15 Arachis hypogaea HOM05D006147 ORTHO05D007501 1.3e-15 88.2 83 56.6
SEGI_01868 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 4.3e-14 83.2 63 63.5
MBI05_g17912_MAGBIO Magnolia biondii HOM05D006147 ORTHO05D007501 1.8e-12 77.8 47 76.6
Duzib132G0670 Durio zibethinus HOM05D006147 ORTHO05D007501 9.3e-09 65.5 110 40.9
MELO3C013418.2 Cucumis melo HOM05D006147 ORTHO05D007501 7.9e-08 62.4 58 53.4
COL.COLO4_26276 Corchorus olitorius HOM05D000089 ORTHO05D000726 1.9e-06 57.8 312 25.0
arahy.Tifrunner.gnm1.ann1.U5A9T5 Arachis hypogaea HOM05D000321 ORTHO05D000204 2.5e-06 57.4 180 30.6


User provided reference genes

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