Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0068 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 2.3e-240 835.1 410 100.0
Nn2g12541 Nelumbo nucifera HOM05D005919 ORTHO05D007176 8.7e-155 550.8 410 64.4
Aqoxy7G03239_Aqoxy7G03240 Aquilegia oxysepala HOM05D005919 ORTHO05D007176 5.8e-151 538.1 374 69.0
TAR383G0301 Trochodendron aralioides HOM05D005919 ORTHO05D007176 5.8e-151 538.1 399 66.4
Actinidia02641 Actinidia chinensis HOM05D005919 ORTHO05D007176 3.8e-150 535.4 396 66.7
RcHm_v2.0_Chr4g0404951 Rosa chinensis HOM05D005919 ORTHO05D007176 6.5e-150 534.6 399 64.9
Dinv43316 Davidia involucrata HOM05D005919 ORTHO05D007176 1.9e-149 533.1 399 65.7
Ciclev10007971m.g Citrus clementina HOM05D005919 ORTHO05D007176 1.2e-148 530.4 376 68.6
PSO063G4858 Papaver somniferum HOM05D005919 ORTHO05D007176 1.6e-148 530.0 404 60.9
Manes.15G095400 Manihot esculenta HOM05D005919 ORTHO05D007176 2.7e-148 529.3 378 68.0
GSVIVG01023723001 Vitis vinifera HOM05D005919 ORTHO05D007176 3.0e-147 525.8 399 63.4
Atru.chr7.495 Acer truncatum HOM05D005919 ORTHO05D007176 1.5e-146 523.5 378 66.1
Potri.018G098700 Populus trichocarpa HOM05D005919 ORTHO05D007176 1.9e-146 523.1 386 65.3
FAN12G0251 Fragaria x ananassa HOM05D005919 ORTHO05D007176 4.3e-146 521.9 398 64.3
QL02p095651 Quercus lobata HOM05D005919 ORTHO05D007176 5.7e-146 521.5 375 67.5
CSS0021645 Camellia sinensis var. sinensis HOM05D005919 ORTHO05D007176 9.7e-146 520.8 399 63.7
Lj4g0016840 Lotus japonicus HOM05D005919 ORTHO05D007176 9.7e-146 520.8 372 66.4
FvH4_4g09660 Fragaria vesca HOM05D005919 ORTHO05D007176 1.3e-145 520.4 398 64.3
FAN17G2955 Fragaria x ananassa HOM05D005919 ORTHO05D007176 4.8e-145 518.5 380 66.6
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 4.8e-145 518.5 374 66.6
Hma1.2p1_1531F.1_g289233 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 6.3e-145 518.1 400 64.8
MD16G1262500 Malus domestica HOM05D005919 ORTHO05D007176 2.4e-144 516.2 393 64.9
CANSAT11G0901 Cannabis sativa HOM05D005919 ORTHO05D007176 3.1e-144 515.8 373 67.3
TWI53G0694 Tripterygium wilfordii HOM05D005919 ORTHO05D007176 5.3e-144 515.0 375 65.1
FAN12G4285 Fragaria x ananassa HOM05D005919 ORTHO05D007176 6.9e-144 514.6 405 63.0
Glyma.13G091700 Glycine max HOM05D005919 ORTHO05D007176 6.9e-144 514.6 372 66.1
Prupe.1G097400 Prunus persica HOM05D005919 ORTHO05D007176 6.9e-144 514.6 389 65.3
Rhsim01G0012200 Rhododendron simsii HOM05D005919 ORTHO05D007176 9.0e-144 514.2 390 64.9
Cfa013547 Carpinus fangiana HOM05D005919 ORTHO05D007176 5.9e-143 511.5 374 66.3
Duzib150G0612 Durio zibethinus HOM05D005919 ORTHO05D007176 5.9e-143 511.5 374 66.8
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 1.0e-142 510.8 372 65.1
Thecc.09G160900 Theobroma cacao HOM05D005919 ORTHO05D007176 1.3e-142 510.4 373 65.7
BcaNung03092 Brassica carinata HOM05D005919 ORTHO05D007176 3.8e-142 508.8 376 66.5
PGR042G2595 Punica granatum HOM05D005919 ORTHO05D007176 8.5e-142 507.7 378 64.8
HPP92_021127 Vanilla planifolia HOM05D005919 ORTHO05D007176 8.5e-142 507.7 386 63.7
FAN22G0736 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.1e-141 507.3 382 64.9
Lalb_Chr12g0199061 Lupinus albus HOM05D005919 ORTHO05D007176 1.4e-141 506.9 374 65.8
A02p02750 Brassica napus HOM05D005919 ORTHO05D007176 3.2e-141 505.8 376 65.4
PGSC0003DMG401011224 Solanum tuberosum HOM05D005919 ORTHO05D007176 3.2e-141 505.8 370 65.4
BcaC03g13443 Brassica carinata HOM05D005919 ORTHO05D007176 4.2e-141 505.4 375 66.4
AT5G14850 Arabidopsis thaliana HOM05D005919 ORTHO05D007176 5.5e-141 505.0 377 65.3
BraA02t05246Z Brassica rapa HOM05D005919 ORTHO05D007176 5.5e-141 505.0 377 65.5
C02p07360 Brassica napus HOM05D005919 ORTHO05D007176 7.2e-141 504.6 375 66.1
BolC2t06667H Brassica oleracea HOM05D005919 ORTHO05D007176 7.2e-141 504.6 375 66.1
HanXRQChr09g0244361 Helianthus annuus HOM05D005919 ORTHO05D007176 7.2e-141 504.6 377 62.3
Solyc07g006330.2 Solanum lycopersicum HOM05D005919 ORTHO05D007176 9.4e-141 504.2 370 65.4
ATR0824G006 Amborella trichopoda HOM05D005919 ORTHO05D007176 1.2e-140 503.8 397 63.7
Medtr4g129500 Medicago truncatula HOM05D005919 ORTHO05D007176 1.6e-140 503.4 380 64.2
SHI02981 Sapria himalayana HOM05D005919 ORTHO05D007176 1.6e-140 503.4 381 64.6
THA.LOC104819083 Tarenaya hassleriana HOM05D005919 ORTHO05D007176 2.1e-140 503.1 381 63.3
TPR.G5290 Trifolium pratense HOM05D005919 ORTHO05D007176 2.1e-140 503.1 392 61.2
MSTRG.26243 Avicennia marina HOM05D005919 ORTHO05D007176 2.7e-140 502.7 390 62.6
ClCG09G013740 Citrullus lanatus HOM05D005919 ORTHO05D007176 2.7e-140 502.7 376 63.6
Cpa.g.sc42.125 Carica papaya HOM05D005919 ORTHO05D007176 3.6e-140 502.3 369 65.3
Carub.0006s1300 Capsella rubella HOM05D005919 ORTHO05D007176 4.6e-140 501.9 385 62.9
Cc06_g14010 Coffea canephora HOM05D005919 ORTHO05D007176 4.6e-140 501.9 371 65.8
Psat4g048080 Pisum sativum HOM05D005919 ORTHO05D007176 4.6e-140 501.9 375 63.7
CAN.G1870.2 Capsicum annuum HOM05D005919 ORTHO05D007176 6.1e-140 501.5 369 65.3
Eucgr.C00228 Eucalyptus grandis HOM05D005919 ORTHO05D007176 1.0e-139 500.7 373 64.3
Sp6g29230 Schrenkiella parvula HOM05D005919 ORTHO05D007176 1.0e-139 500.7 379 65.2
Aa31LG11G14640 Aethionema arabicum HOM05D005919 ORTHO05D007176 1.8e-139 500.0 377 64.2
AL6G25620 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 2.3e-139 499.6 376 64.9
Gohir.A06G079400 Gossypium hirsutum HOM05D005919 ORTHO05D007176 3.0e-139 499.2 369 65.3
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 5.1e-139 498.4 374 64.7
Thhalv10013155m.g Eutrema salsugineum HOM05D005919 ORTHO05D007176 5.1e-139 498.4 377 63.7
Gorai.010G092100 Gossypium raimondii HOM05D005919 ORTHO05D007176 1.1e-138 497.3 382 63.6
Nitab4.5_0005985g0040 Nicotiana tabacum HOM05D005919 ORTHO05D007176 1.5e-138 496.9 384 63.3
Haze_22168 Corylus avellana HOM05D005919 ORTHO05D007176 4.3e-138 495.4 398 63.1
EL10Ac1g01561 Beta vulgaris HOM05D005919 ORTHO05D007176 5.7e-138 495.0 373 63.8
Lsat_1_v5_gn_7_51941 Lactuca sativa HOM05D005919 ORTHO05D007176 5.7e-138 495.0 376 62.8
CsaV3_1G028860 Cucumis sativus L. HOM05D005919 ORTHO05D007176 1.3e-137 493.8 375 63.7
Lj9A728G22 Lonicera japonica HOM05D005919 ORTHO05D007176 1.7e-137 493.4 399 61.4
arahy.Tifrunner.gnm1.ann1.7FR1J2 Arachis hypogaea HOM05D005919 ORTHO05D007176 2.2e-137 493.0 377 63.7
arahy.Tifrunner.gnm1.ann1.L1AVC7 Arachis hypogaea HOM05D005919 ORTHO05D007176 2.2e-137 493.0 377 63.7
arahy.Tifrunner.gnm1.ann1.KJ1SMN Arachis hypogaea HOM05D005919 ORTHO05D007176 3.7e-137 492.3 398 60.8
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 3.7e-137 492.3 375 62.7
SGA_v2.0_scaffold7G04062 Striga asiatica HOM05D005919 ORTHO05D007176 4.8e-137 491.9 388 62.1
Ca_21183_v3 Cicer arietinum L. HOM05D005919 ORTHO05D007176 8.2e-137 491.1 359 64.6
Sed0019098 Sechium edule HOM05D005919 ORTHO05D007176 2.4e-136 489.6 412 60.4
Sc02g0003990 Simmondsia chinensis HOM05D005919 ORTHO05D007176 6.9e-136 488.0 381 63.8
MELO3C005285.2 Cucumis melo HOM05D005919 ORTHO05D007176 2.6e-135 486.1 376 62.5
Nitab4.5_0005551g0020 Nicotiana tabacum HOM05D005919 ORTHO05D007176 1.0e-134 484.2 383 62.7
Migut.K00275 Erythranthe guttata HOM05D005919 ORTHO05D007176 1.1e-133 480.7 374 62.6
Dinv42785 Davidia involucrata HOM05D005919 ORTHO05D007176 4.2e-133 478.8 333 68.2
arahy.Tifrunner.gnm1.ann1.F7IW15 Arachis hypogaea HOM05D005919 ORTHO05D007176 5.5e-133 478.4 398 59.5
Zm00001eb229730 Zea mays HOM05D005919 ORTHO05D007176 7.2e-133 478.0 384 61.2
arahy.Tifrunner.gnm1.ann1.WJA0QS Arachis hypogaea HOM05D005919 ORTHO05D007176 1.0e-131 474.2 359 63.8
Os01g0580100 Oryza sativa ssp. japonica HOM05D005919 ORTHO05D007176 1.0e-131 474.2 384 60.2
Peaxi162Scf00525g00821 Petunia axillaris HOM05D005919 ORTHO05D007176 1.8e-131 473.4 369 62.9
Oeu035674.1 Olea europaea HOM05D005919 ORTHO05D007176 5.3e-128 461.8 389 58.4
PSO782G2448 Papaver somniferum HOM05D005919 ORTHO05D007176 1.2e-124 450.7 331 62.5
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 8.5e-118 427.9 325 60.0
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 4.7e-116 422.2 368 55.2
Pp3c10_23620 Physcomitrium patens HOM05D005919 ORTHO05D007176 1.7e-113 413.7 393 51.7
Pp3c10_23630 Physcomitrium patens HOM05D005919 ORTHO05D007176 1.7e-113 413.7 393 51.7
SalBow1G6099 Salvia bowleyana HOM05D005919 ORTHO05D007176 7.0e-112 408.3 321 62.3
Dinv41305 Davidia involucrata HOM05D005919 ORTHO05D007176 1.1e-109 401.0 291 68.0
Hund26692 Selenicereus undatus HOM05D005919 ORTHO05D007176 6.1e-108 395.2 448 48.7
DCAR_011759 Daucus carota HOM05D005919 ORTHO05D007176 1.3e-102 377.5 287 63.8
Zm00001eb229670 Zea mays HOM05D005919 ORTHO05D007176 2.5e-101 373.2 310 58.7
vmacro13072 Vaccinium macrocarpon HOM05D005919 ORTHO05D007176 1.6e-100 370.5 314 59.9
Sopen07g002420 Solanum pennellii HOM05D005919 ORTHO05D007176 3.4e-90 336.3 248 66.9
FAN07G1390 Fragaria x ananassa HOM05D005919 ORTHO05D007176 5.8e-90 335.5 338 54.7
Hma1.2p1_1531F.1_g289236 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 6.0e-87 325.5 290 58.3
Oeu031853.1 Olea europaea HOM05D005919 ORTHO05D007176 1.3e-86 324.3 264 59.8
CiPaw.07G186600 Carya illinoinensis HOM05D005919 ORTHO05D007176 1.1e-85 321.2 247 64.8
CARHR198500 Cardamine hirsuta HOM05D005919 ORTHO05D007176 1.4e-83 314.3 252 63.1
arahy.Tifrunner.gnm1.ann1.IETZ0A Arachis hypogaea HOM05D005919 ORTHO05D007176 1.7e-73 280.8 216 62.0
MCO09G503 Micromonas commoda HOM05D005919 ORTHO05D007176 2.2e-73 280.4 389 37.3
SGA_v2.0_scaffold87G27166 Striga asiatica HOM05D005919 ORTHO05D007176 1.7e-65 254.2 380 41.6
Gohir.D06G079000 Gossypium hirsutum HOM05D005919 ORTHO05D007176 1.9e-61 240.7 370 40.3
MD13G1260800 Malus domestica HOM05D005919 ORTHO05D007176 2.1e-52 210.7 297 43.1
COL.COLO4_04535 Corchorus olitorius HOM05D005919 ORTHO05D007176 2.4e-48 197.2 153 63.4
Glyma.17G068633 Glycine max HOM05D005919 ORTHO05D007176 1.3e-41 174.9 159 54.7
AUR62026693 Chenopodium quinoa HOM05D005919 ORTHO05D007176 2.2e-41 174.1 113 69.0
Actinidia20955 Actinidia chinensis HOM05D005919 ORTHO05D007176 4.9e-41 172.9 139 59.0
Psat4g010400 Pisum sativum HOM05D005919 ORTHO05D007176 6.0e-39 166.0 108 70.4
PRCOL_00000120 Prasinoderma coloniale HOM05D000722 ORTHO05D007176 9.3e-32 142.1 356 30.3
DCAR_017944 Daucus carota HOM05D005919 ORTHO05D007176 2.3e-22 110.9 133 48.1
arahy.Tifrunner.gnm1.ann1.I3IQB6 Arachis hypogaea HOM05D005919 ORTHO05D007176 5.3e-19 99.8 108 49.1
Rhsim01G0011300 Rhododendron simsii HOM05D005919 ORTHO05D007176 7.2e-16 89.4 75 56.0
Psat4g048040 Pisum sativum HOM05D005919 ORTHO05D007176 1.6e-10 71.6 42 71.4
QL04p029079 Quercus lobata HOM05D006213 ORTHO05D008107 4.5e-10 70.1 215 28.8
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 3.2e-08 63.9 231 28.1
SMO145G0125 Selaginella moellendorffii HOM05D009274 ORTHO05D011512 7.2e-08 62.8 298 25.2
HPP92_020680 Vanilla planifolia HOM05D006213 ORTHO05D008107 1.6e-07 61.6 208 23.6
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 8.0e-07 59.3 324 22.2
Glyma.17G068567 Glycine max HOM05D005919 ORTHO05D007176 4.0e-06 57.0 69 50.7


User provided reference genes

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