Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0061 Ceratophyllum demersum HOM05D004118 ORTHO05D004686 4.8e-246 854.4 532 100.0
Nitab4.5_0000246g0070 Nicotiana tabacum HOM05D004118 ORTHO05D004686 9.3e-16 89.4 603 26.0
Manes.15G090200 Manihot esculenta HOM05D004118 ORTHO05D004686 2.3e-14 84.7 594 24.1
Manes.03G104700 Manihot esculenta HOM05D004118 ORTHO05D004686 3.9e-14 84.0 588 33.0
CiPaw.11G166400 Carya illinoinensis HOM05D004118 ORTHO05D004686 1.5e-13 82.0 580 26.9
Nitab4.5_0011677g0020 Nicotiana tabacum HOM05D004118 ORTHO05D004686 1.9e-13 81.6 595 27.6
Potri.001G373100 Populus trichocarpa HOM05D004118 ORTHO05D004686 1.3e-12 79.0 596 25.3
Sabra11G0090500 Salix brachista HOM05D004118 ORTHO05D004686 2.1e-12 78.2 585 24.8
Sabra11G0091500 Salix brachista HOM05D004118 ORTHO05D004686 4.1e-11 73.9 583 24.5
Dinv14950 Davidia involucrata HOM05D004118 ORTHO05D004686 5.3e-11 73.6 272 28.3
QL08p023555 Quercus lobata HOM05D004118 ORTHO05D004686 1.5e-10 72.0 595 28.1
PSO541G0755 Papaver somniferum HOM05D004118 ORTHO05D004686 2.0e-10 71.6 73 52.1
Actinidia14383 Actinidia chinensis HOM05D004118 ORTHO05D004686 4.5e-10 70.5 133 35.3
Glyma.12G227300 Glycine max HOM05D004118 ORTHO05D004686 4.5e-10 70.5 144 34.7
Psat5g241400 Pisum sativum HOM05D004118 ORTHO05D004686 4.5e-10 70.5 150 33.3
Gorai.013G171900 Gossypium raimondii HOM05D004118 ORTHO05D004686 1.0e-09 69.3 150 30.7
Duzib213G0890 Durio zibethinus HOM05D004118 ORTHO05D004686 1.3e-09 68.9 572 22.6
MD03G1236100 Malus domestica HOM05D004118 ORTHO05D004686 1.3e-09 68.9 583 24.0
Aa31LG8G2310 Aethionema arabicum HOM05D004118 ORTHO05D004686 2.9e-09 67.8 47 63.8
A05p34340 Brassica napus HOM05D004118 ORTHO05D004686 2.9e-09 67.8 47 63.8
C05p52120 Brassica napus HOM05D004118 ORTHO05D004686 2.9e-09 67.8 47 63.8
BolC5t33897H Brassica oleracea HOM05D004118 ORTHO05D004686 2.9e-09 67.8 47 63.8
BraA05t22255Z Brassica rapa HOM05D004118 ORTHO05D004686 2.9e-09 67.8 47 63.8
CANSAT35G0858 Cannabis sativa HOM05D004118 ORTHO05D004686 2.9e-09 67.8 149 33.6
Gohir.A13G147400 Gossypium hirsutum HOM05D004118 ORTHO05D004686 2.9e-09 67.8 151 32.5
MBI07_g32544_MAGBIO Magnolia biondii HOM05D004118 ORTHO05D004686 3.8e-09 67.4 123 42.3
PSO017G1325 Papaver somniferum HOM05D004118 ORTHO05D004686 5.0e-09 67.0 77 45.5
TWI39G0897 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 5.0e-09 67.0 607 29.7
Aqoxy4G00578 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 6.5e-09 66.6 101 40.6
AT3G15095 Arabidopsis thaliana HOM05D004118 ORTHO05D004686 6.5e-09 66.6 78 48.7
CARHR090060 Cardamine hirsuta HOM05D004118 ORTHO05D004686 6.5e-09 66.6 45 66.7
PSO478G3864 Papaver somniferum HOM05D004118 ORTHO05D004686 6.5e-09 66.6 77 45.5
Rhsim04G0023200 Rhododendron simsii HOM05D004118 ORTHO05D004686 6.5e-09 66.6 564 28.2
Atru.chr2.2381 Acer truncatum HOM05D004118 ORTHO05D004686 8.5e-09 66.2 137 33.6
Solyc07g062730.1 Solanum lycopersicum HOM05D004118 ORTHO05D004686 8.5e-09 66.2 601 23.6
BcaB06g29535 Brassica carinata HOM05D004118 ORTHO05D004686 1.1e-08 65.9 46 63.0
Lj3g0023579 Lotus japonicus HOM05D004118 ORTHO05D004686 1.4e-08 65.5 47 61.7
Potri.011G097700 Populus trichocarpa HOM05D004118 ORTHO05D004686 1.4e-08 65.5 606 23.1
PGSC0003DMG400012399 Solanum tuberosum HOM05D004118 ORTHO05D004686 1.9e-08 65.1 590 24.4
Aqoxy1G02262 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 2.5e-08 64.7 551 29.0
TPR.G17527 Trifolium pratense HOM05D004118 ORTHO05D004686 2.5e-08 64.7 46 63.0
MELO3C019394.2 Cucumis melo HOM05D004118 ORTHO05D004686 7.2e-08 63.2 111 38.7
FvH4_3g19150 Fragaria vesca HOM05D004118 ORTHO05D004686 7.2e-08 63.2 614 24.1
Lalb_Chr25g0286181 Lupinus albus HOM05D004118 ORTHO05D004686 9.3e-08 62.8 128 36.7
CAN.G162.27 Capsicum annuum HOM05D004118 ORTHO05D004686 1.6e-07 62.0 580 23.8
HanXRQChr15g0494281 Helianthus annuus HOM05D004118 ORTHO05D004686 2.1e-07 61.6 127 34.6
THA.LOC104810455 Tarenaya hassleriana HOM05D004118 ORTHO05D004686 2.1e-07 61.6 80 43.8
BcaB04g20948 Brassica carinata HOM05D004118 ORTHO05D004686 2.7e-07 61.2 45 57.8
CsaV3_3G019580 Cucumis sativus L. HOM05D004118 ORTHO05D004686 2.7e-07 61.2 192 32.8
Oeu025351.1 Olea europaea HOM05D004118 ORTHO05D004686 2.7e-07 61.2 173 33.5
TPR.G17554 Trifolium pratense HOM05D004118 ORTHO05D004686 3.6e-07 60.8 168 27.4
Sabra16G0245500 Salix brachista HOM05D004118 ORTHO05D004686 4.6e-07 60.5 578 23.9
Migut.M00768 Erythranthe guttata HOM05D004118 ORTHO05D004686 1.0e-06 59.3 183 31.1
HanXRQChr03g0070941 Helianthus annuus HOM05D004118 ORTHO05D004686 1.0e-06 59.3 218 26.6
Prupe.4G173200 Prunus persica HOM05D004118 ORTHO05D004686 1.0e-06 59.3 582 27.3
Sed0016267 Sechium edule HOM05D004118 ORTHO05D004686 1.0e-06 59.3 53 50.9
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 2.3e-06 58.2 117 34.2
MD11G1256900 Malus domestica HOM05D004118 ORTHO05D004686 2.3e-06 58.2 588 22.1
SEGI_08873 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 2.3e-06 58.2 120 35.0
PGSC0003DMG400015371 Solanum tuberosum HOM05D004118 ORTHO05D004686 2.3e-06 58.2 583 22.3
MSTRG.6813 Avicennia marina HOM05D004118 ORTHO05D004686 3.0e-06 57.8 601 23.6
Ciclev10007570m.g Citrus clementina HOM05D004118 ORTHO05D004686 3.9e-06 57.4 295 26.1
HanXRQChr10g0302481 Helianthus annuus HOM05D004118 ORTHO05D004686 3.9e-06 57.4 166 30.1
Lalb_Chr25g0289231 Lupinus albus HOM05D004499 ORTHO05D004928 3.9e-06 57.4 118 36.4
Sc16g0007320 Simmondsia chinensis HOM05D004118 ORTHO05D004686 3.9e-06 57.4 590 27.8
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 5.1e-06 57.0 568 24.1
Cpa.g.sc80.12 Carica papaya HOM05D004118 ORTHO05D004686 5.1e-06 57.0 586 26.5
FAN25G0990 Fragaria x ananassa HOM05D004118 ORTHO05D004686 5.1e-06 57.0 603 22.9
CSS0010936 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 6.7e-06 56.6 594 22.6
Glyma.13G273000 Glycine max HOM05D004118 ORTHO05D004686 6.7e-06 56.6 559 22.7
Lsat_1_v5_gn_7_103661 Lactuca sativa HOM05D004118 ORTHO05D004686 6.7e-06 56.6 147 34.7
Gohir.A01G060200 Gossypium hirsutum HOM05D004118 ORTHO05D004686 8.7e-06 56.2 37 64.9


User provided reference genes

Program Settings