Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 8.3e-134 480.3 235 100.0
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.1e-112 410.2 203 95.1
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 5.1e-91 338.2 235 70.6
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 7.9e-84 314.3 210 70.5
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 1.8e-83 313.2 226 66.8
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 3.3e-82 308.9 224 68.8
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 2.1e-81 306.2 226 65.5
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 3.7e-81 305.4 235 63.8
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 4.8e-81 305.1 220 66.4
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 4.8e-81 305.1 215 69.3
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 6.2e-81 304.7 201 69.7
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 6.2e-81 304.7 201 69.7
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 6.2e-81 304.7 206 69.4
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 8.1e-81 304.3 223 65.5
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 1.8e-80 303.1 214 64.0
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.5e-79 300.1 221 64.7
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 4.5e-79 298.5 203 68.0
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 5.8e-79 298.1 216 65.7
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 7.6e-79 297.7 254 60.6
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 1.0e-78 297.4 212 67.0
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 1.3e-78 297.0 226 64.6
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 2.9e-78 295.8 222 64.4
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 3.8e-78 295.4 206 67.0
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 6.5e-78 294.7 228 64.9
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 6.5e-78 294.7 213 65.7
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 8.4e-78 294.3 224 64.7
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 1.1e-77 293.9 204 65.7
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 1.1e-77 293.9 206 67.5
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 1.1e-77 293.9 210 65.2
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 2.5e-77 292.7 204 65.2
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 2.5e-77 292.7 202 66.8
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 3.2e-77 292.4 224 63.8
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 4.2e-77 292.0 208 66.3
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 5.5e-77 291.6 212 67.5
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 9.3e-77 290.8 204 65.7
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 9.3e-77 290.8 201 66.7
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 9.3e-77 290.8 256 58.2
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 1.2e-76 290.4 199 68.3
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 1.2e-76 290.4 201 69.2
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 1.6e-76 290.0 222 63.1
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 1.6e-76 290.0 206 66.5
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 2.7e-76 289.3 213 66.2
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 2.7e-76 289.3 193 69.9
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 2.7e-76 289.3 212 62.7
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 3.5e-76 288.9 255 59.6
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 4.6e-76 288.5 219 59.4
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 6.0e-76 288.1 216 63.0
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 6.0e-76 288.1 218 63.8
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 7.9e-76 287.7 202 65.8
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 1.0e-75 287.3 193 68.9
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.8e-75 286.6 241 58.5
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 1.8e-75 286.6 225 61.3
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 2.3e-75 286.2 205 65.4
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 2.3e-75 286.2 218 63.3
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 2.3e-75 286.2 201 65.7
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 3.0e-75 285.8 213 62.0
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 3.0e-75 285.8 194 66.5
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 3.9e-75 285.4 206 66.0
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 6.7e-75 284.6 241 58.9
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 6.7e-75 284.6 218 62.8
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 6.7e-75 284.6 215 64.2
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 6.7e-75 284.6 226 63.7
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 8.7e-75 284.3 212 65.1
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 1.1e-74 283.9 208 62.0
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 1.5e-74 283.5 224 61.6
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 1.9e-74 283.1 202 65.3
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 2.5e-74 282.7 212 64.2
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 2.5e-74 282.7 208 62.5
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 3.3e-74 282.3 217 61.3
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 3.3e-74 282.3 227 59.5
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 4.3e-74 282.0 208 64.9
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 4.3e-74 282.0 220 60.0
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 4.3e-74 282.0 204 64.2
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 1.3e-73 280.4 210 65.2
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 1.6e-73 280.0 217 61.8
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 2.8e-73 279.3 210 64.8
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 6.3e-73 278.1 221 61.1
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 4.1e-72 275.4 218 61.5
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 4.2e-69 265.4 169 72.2
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 5.5e-69 265.0 166 71.7
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 5.5e-69 265.0 163 71.2
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 2.3e-67 259.6 182 67.6
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 5.1e-67 258.5 193 63.7
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 8.7e-67 257.7 240 58.3
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.9e-66 256.5 186 65.1
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 1.8e-64 250.0 209 57.9
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 8.5e-62 241.1 207 54.1
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 1.4e-61 240.4 208 53.8
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 1.4e-61 240.4 156 71.8
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 3.2e-61 239.2 190 56.3
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 4.6e-60 235.3 133 78.9
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 1.8e-59 233.4 188 55.9
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.5e-58 230.3 155 69.7
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 1.3e-57 227.3 158 65.2
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.4e-56 223.0 197 56.9
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.2e-55 220.7 168 63.7
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 4.5e-47 192.2 195 50.8
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 4.5e-47 192.2 116 75.0
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 1.4e-40 170.6 120 64.2
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 1.7e-38 163.7 238 41.2
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 3.8e-38 162.5 182 44.0
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.1e-36 156.8 230 42.2
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 4.7e-36 155.6 102 66.7
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 4.5e-31 139.0 144 48.6
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 5.9e-31 138.7 81 76.5
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 4.7e-20 102.4 81 59.3
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 4.7e-20 102.4 89 55.1
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 2.9e-17 93.2 81 61.7
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 6.4e-17 92.0 91 51.6
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.8e-16 90.5 53 75.5
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 3.5e-15 86.3 54 70.4
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 9.5e-13 78.2 62 58.1
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 1.8e-11 73.9 66 54.5
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 4.4e-10 69.3 91 42.9
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 4.4e-10 69.3 91 42.9
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 4.4e-10 69.3 91 42.9
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 4.4e-10 69.3 91 42.9
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 1.3e-09 67.8 90 42.2
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 7.0e-08 62.0 57 49.1
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 6.0e-07 58.9 33 75.8
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 3.0e-06 56.6 54 48.1


User provided reference genes

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