Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0039 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 6.1e-92 340.9 182 100.0
TAR365G0925 Trochodendron aralioides HOM05D005434 ORTHO05D006412 3.4e-34 149.1 166 53.0
MBI18_g03842_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 8.4e-33 144.4 140 56.4
TAR636G0087 Trochodendron aralioides HOM05D005434 ORTHO05D006412 3.5e-31 139.0 167 49.7
PSO210G4596 Papaver somniferum HOM05D005434 ORTHO05D006412 1.3e-30 137.1 162 48.8
Manes.05G008100 Manihot esculenta HOM05D005434 ORTHO05D006412 5.1e-30 135.2 161 49.1
Dinv12078 Davidia involucrata HOM05D005434 ORTHO05D006412 1.2e-28 130.6 160 49.4
Potri.014G111500 Populus trichocarpa HOM05D005434 ORTHO05D006412 2.8e-28 129.4 157 45.2
RcHm_v2.0_Chr3g0485651 Rosa chinensis HOM05D005434 ORTHO05D006412 2.8e-28 129.4 162 46.3
QL12p035062 Quercus lobata HOM05D005434 ORTHO05D006412 6.2e-28 128.3 166 46.4
Aqoxy2G02439 Aquilegia oxysepala HOM05D005434 ORTHO05D006412 1.8e-27 126.7 161 47.8
Nn3g21972 Nelumbo nucifera HOM05D005434 ORTHO05D006412 4.0e-27 125.6 144 50.7
FAN26G2209 Fragaria x ananassa HOM05D005434 ORTHO05D006412 5.2e-27 125.2 144 49.3
MBI19_g04828_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 6.9e-27 124.8 161 46.0
MD17G1286100 Malus domestica HOM05D005434 ORTHO05D006412 6.9e-27 124.8 162 45.1
Potri.002G186200 Populus trichocarpa HOM05D005434 ORTHO05D006412 6.9e-27 124.8 157 43.9
CiPaw.08G081800 Carya illinoinensis HOM05D005434 ORTHO05D006412 1.5e-26 123.6 162 47.5
MD09G1291300 Malus domestica HOM05D005434 ORTHO05D006412 3.4e-26 122.5 162 45.1
FAN19G2204 Fragaria x ananassa HOM05D005434 ORTHO05D006412 4.4e-26 122.1 161 45.3
FAN23G2884 Fragaria x ananassa HOM05D005434 ORTHO05D006412 4.4e-26 122.1 144 48.6
FvH4_1g26160 Fragaria vesca HOM05D005434 ORTHO05D006412 5.8e-26 121.7 161 45.3
Lj1A7G43 Lonicera japonica HOM05D005434 ORTHO05D006412 1.3e-25 120.6 140 48.6
CANSAT25G2989 Cannabis sativa HOM05D005434 ORTHO05D006412 1.7e-25 120.2 152 44.7
Gohir.A07G131800 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.7e-25 120.2 152 46.1
PGR142G2929 Punica granatum HOM05D005434 ORTHO05D006412 1.7e-25 120.2 146 47.3
Gohir.A11G105400 Gossypium hirsutum HOM05D005434 ORTHO05D006412 2.2e-25 119.8 148 46.6
CDE08G1326 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 2.9e-25 119.4 67 89.6
Atru.chr5.851 Acer truncatum HOM05D005434 ORTHO05D006412 3.8e-25 119.0 149 47.0
Lj5g0001301 Lotus japonicus HOM05D005434 ORTHO05D006412 3.8e-25 119.0 166 42.8
Thecc.01G326300 Theobroma cacao HOM05D005434 ORTHO05D006412 3.8e-25 119.0 152 44.1
CAN.G179.30 Capsicum annuum HOM05D005434 ORTHO05D006412 4.9e-25 118.6 148 43.9
Duzib138G0614 Durio zibethinus HOM05D005434 ORTHO05D006412 6.4e-25 118.2 152 46.1
Carub.0004s2971 Capsella rubella HOM05D005434 ORTHO05D006412 8.4e-25 117.9 158 43.0
Gorai.001G148200 Gossypium raimondii HOM05D005434 ORTHO05D006412 8.4e-25 117.9 152 44.7
DCAR_005712 Daucus carota HOM05D005434 ORTHO05D006412 1.1e-24 117.5 159 40.9
BcaC02g12619 Brassica carinata HOM05D005434 ORTHO05D006412 1.4e-24 117.1 149 44.3
Solyc01g079080.3 Solanum lycopersicum HOM05D005434 ORTHO05D006412 1.4e-24 117.1 148 43.2
PGSC0003DMG400001122 Solanum tuberosum HOM05D005434 ORTHO05D006412 1.4e-24 117.1 148 43.2
Nitab4.5_0000222g0380 Nicotiana tabacum HOM05D005434 ORTHO05D006412 1.9e-24 116.7 150 44.7
Sopen01g030590 Solanum pennellii HOM05D005434 ORTHO05D006412 1.9e-24 116.7 148 43.2
Peaxi162Scf00309g00625 Petunia axillaris HOM05D005434 ORTHO05D006412 2.4e-24 116.3 150 42.0
TWI14G0253 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 2.4e-24 116.3 160 43.8
Cc01_g21750 Coffea canephora HOM05D005434 ORTHO05D006412 3.2e-24 115.9 147 46.9
Os10g0405500 Oryza sativa ssp. japonica HOM05D005434 ORTHO05D006412 3.2e-24 115.9 176 39.2
Aa31LG1G28350 Aethionema arabicum HOM05D005434 ORTHO05D006412 4.2e-24 115.5 147 45.6
BolC4t21751H Brassica oleracea HOM05D005434 ORTHO05D006412 7.1e-24 114.8 175 40.6
Rhsim02G0256300 Rhododendron simsii HOM05D005434 ORTHO05D006412 7.1e-24 114.8 162 43.8
C04p00990 Brassica napus HOM05D005434 ORTHO05D006412 9.3e-24 114.4 149 43.6
BraA05t19085Z Brassica rapa HOM05D005434 ORTHO05D006412 9.3e-24 114.4 149 43.6
COL.COLO4_23119 Corchorus olitorius HOM05D005434 ORTHO05D006412 9.3e-24 114.4 152 42.1
AT2G46980 Arabidopsis thaliana HOM05D005434 ORTHO05D006412 1.2e-23 114.0 148 43.2
CARHR142350 Cardamine hirsuta HOM05D005434 ORTHO05D006412 1.2e-23 114.0 150 44.0
Lsat_1_v5_gn_9_7120 Lactuca sativa HOM05D005434 ORTHO05D006412 1.2e-23 114.0 164 40.2
Gorai.007G117900 Gossypium raimondii HOM05D005434 ORTHO05D006412 1.6e-23 113.6 148 44.6
Gohir.D11G110300 Gossypium hirsutum HOM05D005434 ORTHO05D006412 2.1e-23 113.2 148 45.3
Thhalv10001318m.g Eutrema salsugineum HOM05D005434 ORTHO05D006412 4.6e-23 112.1 157 41.4
Sabra14G0081900 Salix brachista HOM05D005434 ORTHO05D006412 4.6e-23 112.1 174 39.7
ClCG02G017720 Citrullus lanatus HOM05D005434 ORTHO05D006412 6.0e-23 111.7 164 42.1
AUR62011691 Chenopodium quinoa HOM05D005434 ORTHO05D006412 1.0e-22 110.9 148 43.9
TPR.G3083 Trifolium pratense HOM05D005434 ORTHO05D006412 1.0e-22 110.9 163 39.3
BcaC02g12826 Brassica carinata HOM05D005434 ORTHO05D006412 1.3e-22 110.5 157 41.4
Glyma.02G007100 Glycine max HOM05D005434 ORTHO05D006412 1.3e-22 110.5 167 40.7
Sc17g0000070 Simmondsia chinensis HOM05D005434 ORTHO05D006412 1.3e-22 110.5 146 44.5
Zm00001eb233800 Zea mays HOM05D005434 ORTHO05D006412 1.3e-22 110.5 175 37.1
AL4G46460 Arabidopsis lyrata HOM05D005434 ORTHO05D006412 1.7e-22 110.2 148 42.6
EL10Ac4g10377 Beta vulgaris HOM05D005434 ORTHO05D006412 1.7e-22 110.2 148 43.2
Sed0026347 Sechium edule HOM05D005434 ORTHO05D006412 1.7e-22 110.2 155 44.5
SHI34042 Sapria himalayana HOM05D005434 ORTHO05D006412 2.3e-22 109.8 160 41.2
Duzib133G0025 Durio zibethinus HOM05D005434 ORTHO05D006412 3.0e-22 109.4 125 49.6
GSVIVG01028239001 Vitis vinifera HOM05D005434 ORTHO05D006412 3.9e-22 109.0 128 46.1
Sp4g28980 Schrenkiella parvula HOM05D005434 ORTHO05D006412 5.1e-22 108.6 149 42.3
HPP92_011320 Vanilla planifolia HOM05D005434 ORTHO05D006412 5.1e-22 108.6 166 42.2
VMungo0720G1215 Vigna mungo HOM05D005434 ORTHO05D006412 5.1e-22 108.6 166 40.4
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 8.7e-22 107.8 148 41.2
Lalb_Chr02g0147201 Lupinus albus HOM05D005434 ORTHO05D006412 8.7e-22 107.8 161 40.4
Medtr1g085710 Medicago truncatula HOM05D005434 ORTHO05D006412 8.7e-22 107.8 159 39.6
Actinidia20964 Actinidia chinensis HOM05D005434 ORTHO05D006412 4.3e-21 105.5 165 41.2
Haze_05156 Corylus avellana HOM05D005434 ORTHO05D006412 5.6e-21 105.1 158 43.0
Psat6g158560 Pisum sativum HOM05D005434 ORTHO05D006412 5.6e-21 105.1 158 39.2
Ca_10237_v3 Cicer arietinum L. HOM05D005434 ORTHO05D006412 7.3e-21 104.8 172 39.0
Sed0005889 Sechium edule HOM05D005434 ORTHO05D006412 7.3e-21 104.8 149 42.3
Phvul.007G208600 Phaseolus vulgaris HOM05D005434 ORTHO05D006412 1.3e-20 104.0 171 39.2
Glyma.10G138700 Glycine max HOM05D005434 ORTHO05D006412 2.1e-20 103.2 161 39.1
CsaV3_6G012840 Cucumis sativus L. HOM05D005434 ORTHO05D006412 8.1e-20 101.3 166 36.7
CiPaw.07G126400 Carya illinoinensis HOM05D005434 ORTHO05D006412 1.8e-19 100.1 116 49.1
Nitab4.5_0003092g0060 Nicotiana tabacum HOM05D005434 ORTHO05D006412 9.0e-19 97.8 183 36.1
Sc17g0000050 Simmondsia chinensis HOM05D005434 ORTHO05D006412 3.4e-18 95.9 144 41.0
A05p00820 Brassica napus HOM05D005434 ORTHO05D006412 4.5e-18 95.5 123 43.1
Prupe.3G001600 Prunus persica HOM05D005434 ORTHO05D006412 4.5e-18 95.5 137 40.9
DCAR_002941 Daucus carota HOM05D005434 ORTHO05D006412 9.9e-18 94.4 129 43.4
Dinv33178 Davidia involucrata HOM05D005434 ORTHO05D006412 9.9e-18 94.4 100 55.0
Gohir.D07G136100 Gossypium hirsutum HOM05D005434 ORTHO05D006412 9.9e-18 94.4 121 43.8
BcaB07g33880 Brassica carinata HOM05D005434 ORTHO05D006412 3.8e-17 92.4 146 40.4
SGA_v2.0_scaffold310G48189 Striga asiatica HOM05D005434 ORTHO05D006412 3.8e-17 92.4 146 38.4
Migut.D00008 Erythranthe guttata HOM05D005434 ORTHO05D006412 4.9e-17 92.0 148 35.8
arahy.Tifrunner.gnm1.ann1.G6BN46 Arachis hypogaea HOM05D005434 ORTHO05D006412 2.4e-16 89.7 206 31.1
MELO3C013628.2 Cucumis melo HOM05D005434 ORTHO05D006412 3.2e-16 89.4 149 36.2
FAN28G1136 Fragaria x ananassa HOM05D005434 ORTHO05D006412 8.7e-14 81.3 221 31.7
AUR62024551 Chenopodium quinoa HOM05D005434 ORTHO05D006412 1.9e-13 80.1 148 36.5
Ciclev10023478m.g Citrus clementina HOM05D005434 ORTHO05D006412 1.9e-13 80.1 95 46.3
SEGI_30180 Sequoiadendron giganteum HOM05D005434 ORTHO05D006412 6.9e-11 71.6 145 31.0
unitig_62.g23901 Utricularia gibba HOM05D005434 ORTHO05D006412 2.6e-10 69.7 162 29.0
Eucgr.K00557 Eucalyptus grandis HOM05D005434 ORTHO05D006412 1.7e-09 67.0 159 32.7
Cpa.g.sc57.27 Carica papaya HOM05D005434 ORTHO05D006412 2.1e-07 60.1 79 44.3
SGA_v2.0_scaffold417G51248 Striga asiatica HOM05D005434 ORTHO05D006412 3.5e-07 59.3 71 46.5
BcaC01g05050 Brassica carinata HOM05D005434 ORTHO05D006412 5.1e-06 55.5 71 40.8


User provided reference genes

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