Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0018 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 2.2e-140 502.3 255 100.0
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 3.3e-67 259.2 178 76.4
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 3.3e-67 259.2 178 76.4
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 9.5e-67 257.7 178 74.2
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 1.2e-66 257.3 178 75.3
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 2.8e-66 256.1 178 73.0
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 6.1e-66 255.0 178 71.9
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 1.4e-65 253.8 178 74.2
Duzib235G0146 Durio zibethinus HOM05D001329 ORTHO05D004946 2.3e-65 253.1 178 71.9
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 4.0e-65 252.3 178 71.9
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 8.9e-65 251.1 178 73.0
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 1.2e-64 250.8 178 71.3
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 2.6e-64 249.6 185 69.7
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 2.6e-64 249.6 178 71.3
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 2.6e-64 249.6 178 71.3
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 7.5e-64 248.1 178 71.3
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 7.5e-64 248.1 178 70.8
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 1.3e-63 247.3 178 70.8
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 1.3e-63 247.3 178 69.7
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 1.3e-63 247.3 178 70.8
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 1.3e-63 247.3 178 70.8
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 1.3e-63 247.3 178 70.8
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 2.9e-63 246.1 178 70.2
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 2.9e-63 246.1 178 70.2
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 2.9e-63 246.1 178 70.2
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 4.9e-63 245.4 178 71.9
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 6.4e-63 245.0 178 69.7
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 8.3e-63 244.6 178 69.7
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 8.3e-63 244.6 178 69.7
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 1.1e-62 244.2 178 69.7
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 1.1e-62 244.2 178 69.7
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 1.1e-62 244.2 178 69.7
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 1.1e-62 244.2 178 69.7
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 1.1e-62 244.2 178 69.7
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 1.1e-62 244.2 178 69.7
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 1.4e-62 243.8 178 69.1
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 1.9e-62 243.4 178 69.7
CANSAT56G4024 Cannabis sativa HOM05D001329 ORTHO05D004946 1.9e-62 243.4 179 72.6
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 2.4e-62 243.0 178 69.1
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 5.4e-62 241.9 178 69.1
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 5.4e-62 241.9 178 69.1
HPP92_003950 Vanilla planifolia HOM05D001329 ORTHO05D004946 5.4e-62 241.9 171 69.6
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 9.2e-62 241.1 178 69.7
AL58U10020 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 1.6e-61 240.4 178 68.5
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 1.6e-61 240.4 179 72.1
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 2.0e-61 240.0 178 66.9
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 2.0e-61 240.0 178 68.5
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 2.7e-61 239.6 178 68.5
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 3.5e-61 239.2 174 69.0
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 3.5e-61 239.2 178 68.0
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 4.6e-61 238.8 178 68.5
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 6.0e-61 238.4 178 70.2
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 6.0e-61 238.4 178 70.2
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 7.8e-61 238.0 178 66.9
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 2.3e-60 236.5 178 66.9
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 3.9e-60 235.7 180 67.8
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 6.6e-60 235.0 178 68.0
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 8.6e-60 234.6 178 66.9
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 1.9e-59 233.4 165 71.5
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 3.3e-59 232.6 178 66.3
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 7.3e-59 231.5 178 68.5
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 1.2e-58 230.7 178 67.4
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 1.6e-58 230.3 178 65.7
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 2.1e-58 229.9 178 65.7
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 4.7e-58 228.8 178 65.7
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 8.1e-58 228.0 178 66.3
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 3.1e-57 226.1 179 64.2
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 8.9e-57 224.6 178 64.0
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 8.9e-57 224.6 180 64.4
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 2.0e-56 223.4 178 64.6
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 2.6e-56 223.0 178 66.9
Sc12g0010100 Simmondsia chinensis HOM05D001329 ORTHO05D004946 2.6e-56 223.0 178 64.6
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 2.6e-56 223.0 181 66.3
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 3.4e-56 222.6 178 66.9
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 9.8e-56 221.1 186 60.8
CANSAT56G3773 Cannabis sativa HOM05D001329 ORTHO05D004946 2.2e-55 219.9 155 75.5
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 5.4e-54 215.3 167 67.7
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 5.4e-54 215.3 182 62.6
RcHm_v2.0_Chr2g0141101 Rosa chinensis HOM05D001329 ORTHO05D004946 9.2e-54 214.5 179 64.2
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 1.2e-53 214.2 180 63.9
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 1.2e-53 214.2 180 63.9
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 1.2e-53 214.2 178 64.6
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 1.2e-53 214.2 179 63.1
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 7.8e-53 211.5 178 58.4
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 1.0e-52 211.1 179 62.0
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 6.6e-52 208.4 207 57.0
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 6.6e-52 208.4 178 61.2
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 8.6e-52 208.0 179 60.9
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 3.3e-51 206.1 170 64.1
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 4.3e-51 205.7 183 60.1
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 7.3e-51 204.9 182 59.9
CsaV3_3G023430 Cucumis sativus L. HOM05D001329 ORTHO05D004946 9.5e-51 204.5 180 60.6
MELO3C013011.2 Cucumis melo HOM05D001329 ORTHO05D004946 1.2e-50 204.1 180 61.7
BcaB01g02899 Brassica carinata HOM05D001329 ORTHO05D004946 1.6e-50 203.8 178 62.9
AUR62031953 Chenopodium quinoa HOM05D001329 ORTHO05D004946 1.6e-50 203.8 219 51.6
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 3.6e-50 202.6 190 57.4
SalBow2G1072 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.8e-49 200.3 185 60.5
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 2.3e-49 199.9 229 52.4
SGA_v2.0_scaffold45G16999 Striga asiatica HOM05D001329 ORTHO05D004946 2.0e-48 196.8 177 62.1
Prupe.3G056500 Prunus persica HOM05D001329 ORTHO05D004946 9.9e-48 194.5 137 74.5
arahy.Tifrunner.gnm1.ann1.VU8J7C Arachis hypogaea HOM05D001329 ORTHO05D004946 1.9e-43 180.3 167 58.7
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 3.3e-43 179.5 178 55.1
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 3.3e-43 179.5 170 61.2
SGA_v2.0_scaffold265G46056 Striga asiatica HOM05D001329 ORTHO05D004946 4.7e-42 175.6 200 50.5
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 2.9e-39 166.4 167 57.5
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 2.7e-37 159.8 168 49.4
Dinv30424 Davidia involucrata HOM05D001329 ORTHO05D004946 1.7e-36 157.1 128 68.0
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 4.8e-34 149.1 195 44.1
Ca_01173_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 2.6e-32 143.3 182 48.9
SMO146G0024 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 4.4e-32 142.5 180 43.3
Psat5g295200 Pisum sativum HOM05D001329 ORTHO05D004946 7.6e-32 141.7 136 58.8
AUR62022239 Chenopodium quinoa HOM05D001329 ORTHO05D004946 4.9e-31 139.0 177 44.1
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 1.1e-30 137.9 186 47.8
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 1.4e-30 137.5 187 43.3
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 6.6e-28 128.6 199 38.7
Psat5g239480 Pisum sativum HOM05D001329 ORTHO05D004946 1.3e-26 124.4 143 53.1
DCAR_007591 Daucus carota HOM05D001329 ORTHO05D004946 2.1e-26 123.6 113 63.7
SMO173G0086 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.8e-25 120.6 179 40.8
SMO173G0029 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 2.0e-24 117.1 179 39.7
SMO173G0090 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 5.8e-24 115.5 181 37.0
SMO146G0193 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.2e-22 109.8 157 40.1
MCO02G474 Micromonas commoda HOM05D001329 ORTHO05D004946 1.9e-19 100.5 171 34.5
Cpa.g.sc2949.1 Carica papaya HOM05D001329 ORTHO05D004946 5.3e-17 92.4 51 86.3
PGR102G0501 Punica granatum HOM05D001329 ORTHO05D004946 1.0e-15 88.2 65 66.2
PRCOL_00001245 Prasinoderma coloniale HOM05D001329 ORTHO05D004946 2.2e-15 87.0 164 31.7
Cre07.g317908 Chlamydomonas reinhardtii HOM05D001329 ORTHO05D004946 8.4e-15 85.1 193 32.6
Haze_15873 Corylus avellana HOM05D001329 ORTHO05D004946 7.1e-14 82.0 96 53.1
VMungo1080G0220 Vigna mungo HOM05D001329 ORTHO05D004946 2.7e-13 80.1 88 53.4
SMO173G0016 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 6.0e-13 79.0 70 47.1
AUR62022260 Chenopodium quinoa HOM05D001329 ORTHO05D004946 7.9e-13 78.6 118 41.5
Zm00001eb270700 Zea mays HOM05D001329 ORTHO05D004946 2.5e-11 73.6 73 56.2
SHI11147 Sapria himalayana HOM05D000105 ORTHO05D000023 4.3e-11 72.8 81 48.1
SHI11148 Sapria himalayana HOM05D000105 ORTHO05D000023 3.7e-10 69.7 141 31.9
Glyma.08G248800 Glycine max HOM05D001329 ORTHO05D004946 3.1e-09 66.6 48 68.8
SalBow8G0867 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.4e-06 57.8 109 37.6
Haze_15869 Corylus avellana HOM05D001329 ORTHO05D004946 2.5e-06 57.0 101 41.6
Cpa.g.c44864 Carica papaya HOM05D001329 ORTHO05D004946 4.2e-06 56.2 40 62.5


User provided reference genes

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