Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 2.1e-36 155.2 79 100.0
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 3.2e-29 131.3 70 94.3
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 8.4e-22 106.7 69 72.5
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 1.1e-21 106.3 73 64.4
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 1.9e-21 105.5 74 64.9
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.9e-21 105.5 69 71.0
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 1.9e-21 105.5 69 71.0
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 2.4e-21 105.1 74 63.5
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 3.2e-21 104.8 69 71.0
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 3.2e-21 104.8 69 69.6
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 3.2e-21 104.8 69 69.6
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 4.2e-21 104.4 69 66.7
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 5.4e-21 104.0 69 72.5
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 5.4e-21 104.0 69 68.1
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 5.4e-21 104.0 69 68.1
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 5.4e-21 104.0 72 69.4
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 7.1e-21 103.6 71 67.6
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 7.1e-21 103.6 69 69.6
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 7.1e-21 103.6 71 64.8
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 7.1e-21 103.6 69 66.7
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 9.3e-21 103.2 71 70.4
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 9.3e-21 103.2 69 68.1
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 9.3e-21 103.2 69 68.1
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 9.3e-21 103.2 69 71.0
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 1.2e-20 102.8 70 68.6
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 1.6e-20 102.4 69 69.6
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 1.6e-20 102.4 69 69.6
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 1.6e-20 102.4 69 69.6
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.6e-20 102.4 69 71.0
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 1.6e-20 102.4 69 71.0
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 1.6e-20 102.4 69 69.6
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 1.6e-20 102.4 69 65.2
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.6e-20 102.4 69 68.1
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 2.1e-20 102.1 69 68.1
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 2.7e-20 101.7 69 66.7
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 2.7e-20 101.7 69 68.1
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 2.7e-20 101.7 69 68.1
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.7e-20 101.7 69 68.1
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 2.7e-20 101.7 69 66.7
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 3.5e-20 101.3 69 65.2
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 3.5e-20 101.3 69 66.7
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 3.5e-20 101.3 69 68.1
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 4.6e-20 100.9 69 69.6
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 6.0e-20 100.5 68 69.1
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 6.0e-20 100.5 69 66.7
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 7.8e-20 100.1 69 65.2
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 7.8e-20 100.1 69 66.7
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 7.8e-20 100.1 69 66.7
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 7.8e-20 100.1 69 66.7
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 7.8e-20 100.1 69 66.7
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 7.8e-20 100.1 69 65.2
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 7.8e-20 100.1 69 66.7
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 7.8e-20 100.1 69 68.1
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 1.0e-19 99.8 69 69.6
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 1.0e-19 99.8 72 65.3
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 1.0e-19 99.8 69 68.1
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 1.0e-19 99.8 73 67.1
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 1.3e-19 99.4 69 65.2
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 1.3e-19 99.4 69 66.7
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.3e-19 99.4 69 66.7
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 1.3e-19 99.4 69 69.6
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 1.7e-19 99.0 69 65.2
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 1.7e-19 99.0 69 68.1
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 2.3e-19 98.6 69 63.8
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 2.3e-19 98.6 69 63.8
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 2.3e-19 98.6 69 63.8
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.3e-19 98.6 69 66.7
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 2.3e-19 98.6 69 68.1
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 3.0e-19 98.2 69 63.8
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 3.0e-19 98.2 69 65.2
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 3.0e-19 98.2 69 65.2
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 3.9e-19 97.8 69 63.8
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 3.9e-19 97.8 69 63.8
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 3.9e-19 97.8 69 63.8
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 3.9e-19 97.8 69 63.8
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 3.9e-19 97.8 69 68.1
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 3.9e-19 97.8 69 68.1
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 5.1e-19 97.4 69 63.8
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 6.6e-19 97.1 69 62.3
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 6.6e-19 97.1 69 63.8
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 8.7e-19 96.7 69 66.7
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 8.7e-19 96.7 66 66.7
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 1.5e-18 95.9 69 60.9
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 1.5e-18 95.9 69 66.7
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.5e-18 95.9 69 62.3
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 1.9e-18 95.5 70 62.9
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 1.9e-18 95.5 70 62.9
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 1.9e-18 95.5 69 62.3
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.9e-18 95.5 69 60.9
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 1.9e-18 95.5 69 65.2
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 2.5e-18 95.1 69 60.9
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 4.3e-18 94.4 69 60.9
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 5.6e-18 94.0 69 68.1
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 7.3e-18 93.6 69 62.3
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 9.6e-18 93.2 69 62.3
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 1.3e-17 92.8 69 60.9
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 2.1e-17 92.0 70 61.4
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 2.1e-17 92.0 63 66.7
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 2.1e-17 92.0 69 59.4
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 2.8e-17 91.7 73 63.0
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 3.6e-17 91.3 69 58.0
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 4.8e-17 90.9 69 62.3
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 8.1e-17 90.1 82 54.9
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.1e-16 89.7 76 56.6
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 1.1e-16 89.7 68 55.9
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.8e-16 89.0 74 58.1
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 4.0e-16 87.8 73 57.5
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 2.0e-15 85.5 71 54.9
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 2.6e-15 85.1 69 56.5
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 5.8e-15 84.0 68 55.9
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 2.9e-14 81.6 76 57.9
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 2.9e-14 81.6 78 56.4
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 9.3e-13 76.6 72 52.8
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.2e-12 76.3 72 54.2
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 1.8e-11 72.4 42 78.6
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 6.2e-09 63.9 36 83.3
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 6.2e-09 63.9 51 58.8
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 5.3e-08 60.8 38 76.3
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 3.4e-07 58.2 72 43.1
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 7.6e-07 57.0 73 45.2


User provided reference genes

Program Settings