Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 5.0e-67 257.7 134 100.0
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.1e-63 246.5 134 94.8
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 2.0e-55 219.2 134 80.6
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 2.2e-54 215.7 134 79.9
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 1.1e-53 213.4 134 79.9
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 3.1e-53 211.8 134 77.6
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 4.1e-53 211.5 134 76.9
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 5.4e-53 211.1 134 78.4
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 1.2e-52 209.9 134 75.4
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 2.7e-52 208.8 133 78.2
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 2.7e-52 208.8 134 76.9
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 2.7e-52 208.8 134 78.4
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 4.5e-52 208.0 134 76.9
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 2.9e-51 205.3 134 74.6
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 5.0e-51 204.5 134 76.1
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 6.5e-51 204.1 134 77.6
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 6.5e-51 204.1 134 76.1
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 6.5e-51 204.1 135 76.3
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 8.5e-51 203.8 134 74.6
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 8.5e-51 203.8 134 73.9
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 1.1e-50 203.4 132 76.5
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 1.1e-50 203.4 134 75.4
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 1.1e-50 203.4 134 76.1
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 1.5e-50 203.0 132 74.2
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 1.9e-50 202.6 135 75.6
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.9e-50 202.6 134 75.4
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 1.9e-50 202.6 134 73.9
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 5.5e-50 201.1 134 70.1
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 7.2e-50 200.7 134 73.9
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 7.2e-50 200.7 134 71.6
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 7.2e-50 200.7 134 76.1
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 1.6e-49 199.5 135 74.1
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 1.6e-49 199.5 134 70.1
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 1.6e-49 199.5 134 73.1
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 2.7e-49 198.7 134 74.6
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 3.6e-49 198.4 134 73.1
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 3.6e-49 198.4 134 73.1
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 4.7e-49 198.0 134 72.4
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 4.7e-49 198.0 135 74.8
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 1.4e-48 196.4 134 71.6
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.4e-48 196.4 134 73.1
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 2.3e-48 195.7 134 69.4
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 2.3e-48 195.7 134 70.1
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 2.3e-48 195.7 134 70.1
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 3.0e-48 195.3 134 73.1
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 3.0e-48 195.3 134 73.1
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 3.0e-48 195.3 134 72.4
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 3.0e-48 195.3 134 72.4
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 3.0e-48 195.3 134 68.7
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 5.2e-48 194.5 134 71.6
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 5.2e-48 194.5 134 68.7
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 6.8e-48 194.1 134 71.6
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 1.2e-47 193.4 134 71.6
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 2.0e-47 192.6 134 69.4
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 2.6e-47 192.2 134 73.1
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 2.6e-47 192.2 134 73.1
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 5.7e-47 191.0 134 70.1
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 1.3e-46 189.9 135 71.1
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.3e-46 189.9 135 71.9
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 1.3e-46 189.9 132 71.2
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 1.7e-46 189.5 134 69.4
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 2.2e-46 189.1 138 70.3
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 2.2e-46 189.1 134 69.4
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 2.8e-46 188.7 134 71.6
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 2.8e-46 188.7 134 71.6
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 3.7e-46 188.3 134 72.4
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 3.7e-46 188.3 134 67.2
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 4.9e-46 188.0 134 70.9
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 1.4e-45 186.4 134 68.7
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 1.4e-45 186.4 134 72.4
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 4.1e-45 184.9 134 70.1
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 2.7e-44 182.2 134 67.2
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 4.5e-44 181.4 135 66.7
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 1.0e-43 180.3 135 65.9
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 1.0e-43 180.3 135 65.9
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 1.0e-43 180.3 135 65.9
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 1.0e-43 180.3 135 65.9
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.7e-43 179.5 134 64.9
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 2.3e-43 179.1 134 68.7
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.3e-43 179.1 134 68.7
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 2.3e-43 179.1 134 68.7
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 2.9e-43 178.7 134 65.7
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 3.8e-43 178.3 135 65.2
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 3.8e-43 178.3 134 66.4
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 3.8e-43 178.3 135 65.9
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 3.8e-43 178.3 134 69.4
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 5.0e-43 177.9 134 64.9
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 6.6e-43 177.6 134 63.4
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 6.6e-43 177.6 134 67.9
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 6.6e-43 177.6 134 66.4
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 8.6e-43 177.2 134 67.2
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 4.2e-42 174.9 134 66.4
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 5.6e-42 174.5 135 65.9
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 9.5e-42 173.7 134 66.4
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 1.6e-41 172.9 135 63.0
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 2.8e-41 172.2 135 63.7
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 3.6e-41 171.8 105 81.0
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.0e-40 170.2 151 61.6
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 1.8e-40 169.5 135 61.5
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.5e-39 166.4 105 78.1
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.6e-39 165.6 107 77.6
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.6e-39 165.6 107 77.6
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 4.4e-39 164.9 134 64.2
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 7.5e-39 164.1 136 64.0
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 7.5e-39 164.1 136 64.0
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 9.8e-39 163.7 120 66.7
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 1.3e-38 163.3 134 63.4
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 2.9e-38 162.2 134 59.0
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 4.9e-38 161.4 136 62.5
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.1e-37 160.2 111 69.4
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 3.2e-37 158.7 171 49.7
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 1.2e-36 156.8 132 60.6
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 1.2e-36 156.8 134 58.2
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 1.6e-36 156.4 134 61.2
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 4.6e-36 154.8 134 61.2
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 1.3e-35 153.3 136 63.2
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 2.9e-35 152.1 132 62.9
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 6.6e-35 151.0 104 71.2
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 1.5e-34 149.8 134 59.0
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 2.5e-34 149.1 136 61.0
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 3.3e-34 148.7 134 58.2
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 1.2e-33 146.7 134 59.0
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 1.6e-33 146.4 105 70.5
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 1.8e-32 142.9 134 57.5
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 7.5e-31 137.5 105 65.7
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 9.8e-31 137.1 96 69.8
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.7e-30 136.3 91 76.9
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 9.2e-29 130.6 136 49.3
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.0e-28 129.4 102 68.6
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 3.9e-27 125.2 152 46.1
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 5.0e-27 124.8 137 52.6
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 1.1e-26 123.6 125 48.0
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 1.7e-22 109.8 88 67.0
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 2.9e-22 109.0 89 59.6
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 4.6e-20 101.7 105 47.6
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 8.6e-19 97.4 135 42.2
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 8.1e-17 90.9 134 41.8
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 1.4e-16 90.1 107 46.7
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 2.9e-14 82.4 100 52.0
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 7.8e-12 74.3 83 51.8
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 3.0e-11 72.4 57 63.2
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 4.7e-09 65.1 139 31.7
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 1.1e-08 63.9 134 33.6
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 1.4e-08 63.5 35 77.1


User provided reference genes

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