Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 1.8e-75 285.8 145 100.0
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 4.1e-59 231.5 145 82.1
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 1.6e-58 229.6 145 80.0
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 1.6e-58 229.6 145 80.7
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 2.1e-58 229.2 145 80.7
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 2.1e-58 229.2 145 80.0
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 2.1e-58 229.2 145 80.7
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 1.7e-57 226.1 146 78.8
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 3.0e-57 225.3 145 78.6
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 3.9e-57 224.9 145 75.9
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 1.5e-56 223.0 145 77.9
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 2.5e-56 222.2 145 77.9
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 2.5e-56 222.2 145 77.2
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 3.3e-56 221.9 148 81.8
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 3.3e-56 221.9 148 81.8
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 3.3e-56 221.9 147 76.9
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 4.3e-56 221.5 145 77.2
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 5.6e-56 221.1 145 76.6
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 5.6e-56 221.1 145 75.9
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 1.6e-55 219.5 145 75.9
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 2.8e-55 218.8 145 77.2
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 3.6e-55 218.4 145 76.6
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 3.6e-55 218.4 145 75.9
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 8.1e-55 217.2 145 75.9
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 8.1e-55 217.2 145 75.9
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 1.8e-54 216.1 145 75.9
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 1.8e-54 216.1 145 76.6
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 2.4e-54 215.7 145 75.9
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 3.1e-54 215.3 145 75.9
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 3.1e-54 215.3 145 77.2
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 4.0e-54 214.9 145 77.9
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.0e-53 212.6 145 75.2
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 2.6e-53 212.2 145 74.5
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 2.6e-53 212.2 150 72.7
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 2.6e-53 212.2 145 74.5
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 2.6e-53 212.2 145 73.1
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 4.4e-53 211.5 143 76.2
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 4.4e-53 211.5 143 74.8
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 4.4e-53 211.5 145 73.1
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 7.6e-53 210.7 145 76.6
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 9.9e-53 210.3 145 73.1
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 9.9e-53 210.3 145 74.5
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 9.9e-53 210.3 145 71.7
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 1.3e-52 209.9 145 74.5
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 1.3e-52 209.9 151 73.5
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 1.3e-52 209.9 146 75.3
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 1.3e-52 209.9 145 75.9
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 1.3e-52 209.9 145 75.2
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 1.7e-52 209.5 144 72.9
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 2.2e-52 209.1 146 73.3
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 2.9e-52 208.8 145 74.5
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 2.9e-52 208.8 145 74.5
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 2.9e-52 208.8 145 75.9
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 3.8e-52 208.4 146 74.0
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 3.8e-52 208.4 145 69.0
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 4.9e-52 208.0 150 72.7
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 6.4e-52 207.6 131 80.2
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 8.4e-52 207.2 146 75.3
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 8.4e-52 207.2 145 69.7
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 8.4e-52 207.2 145 75.2
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 8.4e-52 207.2 145 73.1
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 1.1e-51 206.8 149 72.5
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 1.4e-51 206.5 148 69.6
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 1.4e-51 206.5 148 69.6
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 1.4e-51 206.5 148 69.6
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 1.4e-51 206.5 132 78.8
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 1.4e-51 206.5 145 73.1
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 1.9e-51 206.1 148 75.0
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 2.4e-51 205.7 145 69.0
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 2.4e-51 205.7 145 73.8
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 2.4e-51 205.7 145 72.4
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 3.2e-51 205.3 152 69.7
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 3.2e-51 205.3 145 70.3
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 3.2e-51 205.3 111 89.2
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 3.2e-51 205.3 150 71.3
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 3.2e-51 205.3 145 70.3
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 4.1e-51 204.9 146 71.9
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 5.4e-51 204.5 145 73.1
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 7.1e-51 204.1 145 73.1
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 9.2e-51 203.8 147 70.1
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 9.2e-51 203.8 145 75.2
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 1.2e-50 203.4 145 72.4
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 1.2e-50 203.4 166 66.9
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 1.2e-50 203.4 145 70.3
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 1.6e-50 203.0 146 71.2
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 2.1e-50 202.6 147 68.7
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 2.1e-50 202.6 145 72.4
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 2.1e-50 202.6 145 72.4
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 2.7e-50 202.2 131 77.9
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 2.7e-50 202.2 147 68.7
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 2.7e-50 202.2 145 69.7
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 2.7e-50 202.2 146 74.0
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 4.6e-50 201.4 141 72.3
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 6.0e-50 201.1 145 70.3
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 6.0e-50 201.1 145 70.3
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 6.0e-50 201.1 143 73.4
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 6.0e-50 201.1 110 89.1
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 6.0e-50 201.1 147 70.7
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 1.0e-49 200.3 140 70.0
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 1.3e-49 199.9 146 73.3
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 1.7e-49 199.5 145 69.7
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 2.3e-49 199.1 147 72.1
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 2.3e-49 199.1 147 72.1
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 3.0e-49 198.7 145 68.3
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 3.0e-49 198.7 116 83.6
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 3.9e-49 198.4 145 69.0
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 5.1e-49 198.0 145 71.0
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 6.6e-49 197.6 147 74.1
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 8.7e-49 197.2 147 71.4
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 1.5e-48 196.4 146 69.2
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 1.9e-48 196.1 145 70.3
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 3.3e-48 195.3 134 73.9
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 5.6e-48 194.5 170 62.4
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 7.3e-48 194.1 145 71.7
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 9.6e-48 193.7 117 82.1
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 4.7e-47 191.4 144 69.4
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 8.1e-47 190.7 111 83.8
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 2.4e-46 189.1 116 80.2
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 1.5e-45 186.4 121 76.9
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 2.6e-45 185.7 221 50.2
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 7.1e-43 177.6 206 51.5
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 7.1e-43 177.6 176 56.8
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 5.6e-40 167.9 92 89.1
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 1.3e-39 166.8 91 89.0
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 1.6e-39 166.4 90 90.0
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 4.8e-39 164.9 109 76.1
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 8.1e-39 164.1 111 73.0
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 1.8e-38 162.9 88 88.6
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 9.3e-35 150.6 110 69.1
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 2.3e-33 146.0 108 64.8
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 4.3e-32 141.7 99 73.7
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 1.4e-30 136.7 108 66.7
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 9.0e-30 134.0 108 62.0
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 1.9e-27 126.3 147 53.1
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 1.2e-26 123.6 108 59.3
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 2.5e-24 115.9 63 92.1
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 6.9e-22 107.8 60 88.3
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 3.4e-21 105.5 73 67.1
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 1.7e-20 103.2 86 57.0
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 5.5e-19 98.2 89 59.6
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 2.8e-15 85.9 145 40.7
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 5.3e-14 81.6 112 41.1
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 1.2e-13 80.5 113 43.4
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 7.7e-13 77.8 63 60.3
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 3.6e-10 68.9 48 70.8
RcHm_v2.0_Chr2g0130991 Rosa chinensis HOM05D004802 ORTHO05D005591 2.5e-08 62.8 68 50.0
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 3.3e-08 62.4 35 82.9
Cfa024847 Carpinus fangiana HOM05D004802 ORTHO05D005591 4.3e-08 62.0 92 41.3
CSS0004783 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 7.4e-08 61.2 60 51.7
PRCOL_00002926 Prasinoderma coloniale HOM05D004802 ORTHO05D005591 4.8e-07 58.5 98 40.8
BcaC02g11004 Brassica carinata HOM05D004802 ORTHO05D005591 1.1e-06 57.4 43 67.4
C04p22280 Brassica napus HOM05D004802 ORTHO05D020149 1.1e-06 57.4 43 67.4
BolC3t13075H Brassica oleracea HOM05D004802 ORTHO05D005591 5.3e-06 55.1 29 82.8


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