Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0792 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 2.3e-149 532.3 296 100.0
CDE02G3020 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 1.9e-82 310.1 213 83.6
CSS0032205 Camellia sinensis var. sinensis HOM05D007431 ORTHO05D008438 1.5e-10 71.2 120 45.8
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 1.5e-10 71.2 64 62.5
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 9.5e-10 68.6 61 63.9
Eucgr.B01149 Eucalyptus grandis HOM05D007431 ORTHO05D008438 3.6e-09 66.6 91 45.1
MD11G1119300 Malus domestica HOM05D016629 ORTHO05D008438 1.8e-08 64.3 64 54.7
arahy.Tifrunner.gnm1.ann1.C9XA4X Arachis hypogaea HOM05D007431 ORTHO05D008438 2.3e-08 63.9 60 58.3
Sc12g0001910 Simmondsia chinensis HOM05D007431 ORTHO05D008438 4.0e-08 63.2 89 44.9
Lj1P179T36 Lonicera japonica HOM05D007431 ORTHO05D008438 5.2e-08 62.8 85 42.4
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 6.8e-08 62.4 62 58.1
BcaB05g22609 Brassica carinata HOM05D007431 ORTHO05D008438 6.8e-08 62.4 94 43.6
Lsat_1_v5_gn_2_80021 Lactuca sativa HOM05D007431 ORTHO05D008438 8.9e-08 62.0 93 43.0
Aa31LG4G15040 Aethionema arabicum HOM05D007431 ORTHO05D008438 1.2e-07 61.6 60 56.7
Actinidia00802 Actinidia chinensis HOM05D007431 ORTHO05D008438 1.5e-07 61.2 67 49.3
AT1G75335 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 1.5e-07 61.2 62 54.8
Medtr1g016270 Medicago truncatula HOM05D007431 ORTHO05D008438 1.5e-07 61.2 59 55.9
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 2.0e-07 60.8 65 52.3
A02p06640 Brassica napus HOM05D007431 ORTHO05D008438 2.0e-07 60.8 63 54.0
C02p11930 Brassica napus HOM05D007431 ORTHO05D008438 2.0e-07 60.8 63 54.0
BolC2t07290H Brassica oleracea HOM05D007431 ORTHO05D008438 2.0e-07 60.8 63 54.0
BraA02t05746Z Brassica rapa HOM05D007431 ORTHO05D008438 2.0e-07 60.8 63 54.0
Potri.013G126701 Populus trichocarpa HOM05D007431 ORTHO05D008438 2.0e-07 60.8 92 43.5
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 2.6e-07 60.5 218 33.9
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 3.4e-07 60.1 65 50.8
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 3.4e-07 60.1 87 44.8
CARHR068680 Cardamine hirsuta HOM05D007431 ORTHO05D008438 4.4e-07 59.7 65 50.8
BraA03t10450Z Brassica rapa HOM05D007431 ORTHO05D008438 5.7e-07 59.3 90 42.2
CANSAT11G1515 Cannabis sativa HOM05D007431 ORTHO05D008438 5.7e-07 59.3 123 39.0
BolC3t13774H Brassica oleracea HOM05D007431 ORTHO05D008438 7.5e-07 58.9 119 34.5
MD03G1106700 Malus domestica HOM05D016629 ORTHO05D008438 7.5e-07 58.9 56 58.9
Sabra13G0105800 Salix brachista HOM05D007431 ORTHO05D008438 7.5e-07 58.9 62 48.4
Sp6g21690 Schrenkiella parvula HOM05D007431 ORTHO05D008438 7.5e-07 58.9 62 51.6
C03p13110 Brassica napus HOM05D007431 ORTHO05D008438 9.8e-07 58.5 98 37.8
Hma1.2p1_0321F.1_g124100 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 9.8e-07 58.5 61 57.4
Potri.019G095600 Populus trichocarpa HOM05D007431 ORTHO05D008438 9.8e-07 58.5 148 36.5
THA.LOC104810823 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 9.8e-07 58.5 98 38.8
Hma1.2p1_0321F.1_g124110 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 1.3e-06 58.2 61 57.4
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 1.7e-06 57.8 62 51.6
Prupe.6G089500 Prunus persica HOM05D016629 ORTHO05D008438 1.7e-06 57.8 64 50.0
Glyma.17G228900 Glycine max HOM05D007431 ORTHO05D008438 2.2e-06 57.4 60 53.3
MBI15_g23248_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 2.2e-06 57.4 65 50.8
Sed0011387 Sechium edule HOM05D007431 ORTHO05D008438 2.2e-06 57.4 70 47.1
TWI53G0129 Tripterygium wilfordii HOM05D007431 ORTHO05D008438 2.2e-06 57.4 60 56.7
Lsat_1_v5_gn_8_91980 Lactuca sativa HOM05D007431 ORTHO05D008438 2.9e-06 57.0 125 39.2
PGR102G0834 Punica granatum HOM05D007431 ORTHO05D008438 2.9e-06 57.0 151 31.1
RhsimUnG0043300 Rhododendron simsii HOM05D002794 ORTHO05D008438 2.9e-06 57.0 127 35.4
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 2.9e-06 57.0 61 50.8
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 3.7e-06 56.6 191 32.5
Sabra19G0107900 Salix brachista HOM05D007431 ORTHO05D008438 3.7e-06 56.6 98 36.7
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 4.9e-06 56.2 65 47.7
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 4.9e-06 56.2 66 48.5
Aa31LG1G12150 Aethionema arabicum HOM05D007431 ORTHO05D008438 6.4e-06 55.8 79 41.8
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 6.4e-06 55.8 65 50.8
DCAR_003389 Daucus carota HOM05D007431 ORTHO05D008438 8.3e-06 55.5 153 30.7
Lj3g0021288 Lotus japonicus HOM05D002777 ORTHO05D001516 8.3e-06 55.5 69 50.7


User provided reference genes

Program Settings