Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 0.0e+00 1310.4 684 100.0
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 3.2e-162 576.2 662 51.2
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 4.2e-162 575.9 653 49.3
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 5.5e-154 548.9 662 49.8
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.2e-153 547.7 662 49.8
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.6e-153 547.4 650 50.8
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 1.5e-151 540.8 657 48.6
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.4e-151 539.7 662 47.9
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 9.8e-151 538.1 660 48.5
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 8.3e-150 535.0 652 48.0
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.4e-149 534.3 660 47.7
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 7.0e-149 531.9 652 48.6
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 2.7e-148 530.0 646 48.1
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 5.9e-148 528.9 659 47.5
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.2e-147 526.9 657 46.9
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 2.9e-147 526.6 651 47.9
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 3.2e-146 523.1 659 47.6
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 6.8e-144 515.4 655 47.3
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 4.4e-143 512.7 672 45.8
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 4.4e-143 512.7 672 45.8
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 7.5e-143 511.9 653 47.0
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 1.7e-142 510.8 671 46.6
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 1.8e-141 507.3 656 46.5
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 3.5e-140 503.1 646 47.2
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 1.0e-139 501.5 657 47.0
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 1.9e-138 497.3 646 45.7
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 2.8e-137 493.4 643 46.7
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 2.8e-137 493.4 653 46.1
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 4.7e-137 492.7 657 46.6
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 8.0e-137 491.9 646 46.4
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 6.8e-136 488.8 638 46.4
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 8.9e-136 488.4 646 46.6
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 1.2e-135 488.0 650 46.0
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 1.5e-135 487.6 634 46.1
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 2.6e-135 486.9 661 44.8
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 2.6e-135 486.9 661 44.6
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 4.4e-135 486.1 646 46.6
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 6.4e-134 482.3 643 45.6
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 8.3e-134 481.9 664 45.0
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 1.8e-133 480.7 691 44.6
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 3.2e-133 479.9 615 47.6
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 3.2e-133 479.9 690 43.9
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 7.0e-133 478.8 649 46.5
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.2e-132 478.0 645 45.3
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 1.2e-132 478.0 647 44.4
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 3.5e-132 476.5 658 44.2
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 4.6e-132 476.1 646 46.0
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 4.6e-132 476.1 650 45.2
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 7.8e-132 475.3 679 44.5
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 7.8e-132 475.3 650 45.2
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 1.3e-131 474.6 635 46.8
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 1.1e-130 471.5 641 45.9
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 3.6e-129 466.5 649 44.4
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 4.7e-129 466.1 716 43.0
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 1.0e-128 464.9 649 45.3
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 6.8e-128 462.2 657 44.4
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 4.9e-126 456.1 599 45.4
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.4e-125 453.8 640 44.2
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 4.1e-125 453.0 649 43.1
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 2.7e-124 450.3 649 43.3
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 4.6e-124 449.5 651 43.0
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 3.3e-122 443.4 649 42.5
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 8.1e-121 438.7 757 39.4
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 8.9e-120 435.3 682 41.1
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 8.9e-120 435.3 649 41.1
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 1.2e-119 434.9 653 44.0
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 4.4e-119 433.0 643 43.4
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 7.5e-119 432.2 679 40.9
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 2.2e-118 430.6 677 41.5
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 6.4e-118 429.1 527 48.6
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 6.4e-118 429.1 798 38.2
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 8.3e-118 428.7 528 49.2
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 1.1e-117 428.3 682 40.9
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 1.4e-117 427.9 662 42.4
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 2.4e-117 427.2 679 40.8
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 1.6e-116 424.5 701 39.5
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 6.0e-116 422.5 625 43.4
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 7.8e-116 422.2 678 42.0
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 2.3e-115 420.6 701 39.7
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 3.9e-115 419.9 631 42.6
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 9.9e-111 405.2 454 50.9
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 1.8e-104 384.4 645 38.1
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 1.2e-103 381.7 458 48.0
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 6.4e-102 375.9 426 51.6
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 6.4e-102 375.9 596 40.6
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 1.4e-101 374.8 634 39.4
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 1.4e-101 374.8 475 47.2
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 7.1e-101 372.5 648 38.4
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 7.3e-98 362.5 665 37.1
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 6.2e-97 359.4 661 37.4
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 9.3e-93 345.5 709 34.6
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.2e-92 345.1 677 35.6
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.3e-89 335.1 663 35.9
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 4.0e-88 330.1 645 37.8
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 1.4e-85 321.6 520 41.5
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 3.0e-83 313.9 641 35.3
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 1.2e-79 302.0 510 38.2
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 2.5e-77 294.3 498 40.0
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 1.5e-71 275.0 499 38.5
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.3e-70 271.9 448 40.4
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 3.6e-68 263.8 503 36.6
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 8.2e-65 252.7 216 59.7
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 1.5e-63 248.4 844 30.2
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 4.6e-60 236.9 421 39.0
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 2.8e-57 227.6 215 58.1
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 1.4e-51 208.8 744 28.6
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 1.8e-51 208.4 165 63.6
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 2.6e-50 204.5 812 28.0
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 3.1e-48 197.6 150 68.7
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 6.1e-44 183.3 218 50.5
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 4.0e-43 180.6 153 60.1
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 9.1e-40 169.5 290 40.0
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 2.7e-39 167.9 324 39.5
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 2.2e-38 164.9 265 42.6
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 6.1e-28 130.2 101 62.4
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 2.8e-20 104.8 181 38.1
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 4.7e-20 104.0 78 67.9
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 2.3e-19 101.7 189 37.0
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.7e-18 97.1 103 54.4
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.4e-16 91.7 112 49.1
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.6e-15 89.0 90 58.9
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 8.0e-12 76.6 320 25.9
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 1.8e-11 75.5 52 67.3
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 2.4e-08 65.1 46 65.2
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 5.4e-08 63.9 90 40.0
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 1.0e-06 59.7 50 64.0


User provided reference genes

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