Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 4.0e-257 891.0 458 100.0
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.7e-152 542.7 422 67.5
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 2.7e-149 532.7 437 64.3
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 5.7e-147 525.0 412 67.5
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 1.2e-144 517.3 425 64.5
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.0e-143 514.2 435 65.7
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 3.6e-141 505.8 407 65.8
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 8.8e-140 501.1 434 62.2
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 2.4e-137 493.0 378 67.2
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 2.4e-137 493.0 419 60.9
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 2.4e-137 493.0 405 64.7
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.1e-137 492.3 375 67.5
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.0e-135 487.6 386 65.8
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 1.0e-135 487.6 386 65.8
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 5.0e-135 485.3 401 63.1
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 5.0e-135 485.3 406 63.1
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 6.6e-135 485.0 427 60.2
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 1.1e-134 484.2 402 64.7
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 1.1e-134 484.2 382 66.5
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 1.9e-134 483.4 391 64.2
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 2.5e-134 483.0 409 61.6
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 3.3e-134 482.6 412 61.7
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 5.6e-134 481.9 376 66.2
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 7.3e-134 481.5 377 66.0
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.6e-133 480.3 418 60.8
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.6e-133 480.3 406 60.8
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 2.1e-133 479.9 428 60.7
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 2.1e-133 479.9 377 66.6
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 2.1e-133 479.9 363 68.3
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 2.8e-133 479.6 398 61.6
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 3.6e-133 479.2 420 59.5
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 4.7e-133 478.8 395 63.0
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 4.7e-133 478.8 380 63.9
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 6.1e-133 478.4 418 61.0
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.0e-132 477.6 418 61.0
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 1.0e-132 477.6 391 63.2
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 1.4e-132 477.2 402 62.4
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 1.4e-132 477.2 391 63.2
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 1.8e-132 476.9 380 64.5
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.8e-132 476.9 403 62.0
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 1.8e-132 476.9 384 63.8
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 3.0e-132 476.1 400 62.8
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 4.0e-132 475.7 405 60.0
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 4.0e-132 475.7 362 68.2
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 6.8e-132 474.9 390 63.3
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 6.8e-132 474.9 449 57.5
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 1.2e-131 474.2 405 59.8
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 1.5e-131 473.8 405 60.2
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 2.0e-131 473.4 418 61.7
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 4.4e-131 472.2 400 62.0
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 7.5e-131 471.5 400 61.5
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 6.4e-130 468.4 429 58.7
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.1e-129 467.6 393 62.3
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 1.8e-129 466.8 469 56.9
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 1.8e-129 466.8 422 59.7
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 2.4e-129 466.5 375 65.3
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 3.2e-129 466.1 410 61.5
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 1.6e-128 463.8 430 57.2
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 1.6e-128 463.8 446 58.7
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.6e-128 463.8 405 59.0
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 2.0e-128 463.4 441 56.9
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 4.6e-128 462.2 445 58.7
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 7.8e-128 461.5 423 60.5
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 7.8e-128 461.5 440 56.6
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 1.0e-127 461.1 418 58.4
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.0e-127 461.1 420 58.3
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.3e-127 460.7 363 66.1
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.7e-127 460.3 421 58.4
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.7e-127 460.3 397 61.2
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.2e-125 454.1 386 62.4
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.4e-124 450.7 424 58.3
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 2.3e-124 449.9 412 59.2
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 3.4e-123 446.0 384 60.9
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 1.7e-122 443.7 387 60.5
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 3.7e-122 442.6 372 62.4
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 4.1e-121 439.1 399 56.9
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 6.6e-119 431.8 335 66.9
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.6e-118 428.7 335 66.6
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 4.7e-117 425.6 469 51.2
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 4.4e-115 419.1 421 55.3
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 4.6e-112 409.1 420 54.8
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 9.5e-110 401.4 402 56.2
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 3.6e-109 399.4 362 58.3
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 4.0e-108 396.0 362 58.0
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 3.4e-107 392.9 389 55.0
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 1.1e-105 387.9 376 58.0
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 7.8e-104 381.7 441 51.5
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 1.5e-102 377.5 372 56.5
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 4.3e-102 375.9 366 57.7
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 7.3e-102 375.2 373 56.6
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 7.3e-102 375.2 373 56.6
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 1.2e-101 374.4 464 48.7
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 2.1e-101 373.6 422 51.7
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 3.4e-99 366.3 380 55.0
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 9.9e-99 364.8 428 51.4
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.7e-95 354.0 317 59.9
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 3.0e-95 353.2 340 56.5
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 5.1e-95 352.4 340 56.8
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 8.1e-93 345.1 436 47.9
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 8.1e-93 345.1 436 47.9
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 1.8e-92 344.0 448 46.7
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 9.9e-91 338.2 370 52.2
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 9.9e-91 338.2 370 52.2
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.7e-90 337.4 375 51.2
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 3.5e-80 303.1 353 51.8
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.1e-72 277.3 227 63.9
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.2e-66 257.3 242 57.4
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 1.0e-63 248.4 216 59.3
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 4.8e-61 239.6 373 38.3
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.1e-54 218.4 410 34.9
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 9.7e-54 215.3 161 72.7
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 9.7e-54 215.3 410 35.9
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 2.0e-43 181.0 140 67.1
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 7.5e-38 162.5 124 70.2
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 1.6e-35 154.8 119 68.9
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 3.8e-34 150.2 107 71.0
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 3.6e-32 143.7 142 51.4
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 3.6e-32 143.7 409 30.3
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 3.0e-31 140.6 265 40.0
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 8.8e-31 139.0 408 30.9
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.6e-27 128.3 123 54.5
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 3.3e-25 120.6 307 31.6
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 3.1e-20 104.0 78 67.9
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 6.6e-18 96.3 127 47.2
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 1.5e-17 95.1 193 34.7
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 3.6e-16 90.5 79 57.0
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 5.4e-12 76.6 238 26.9
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 1.6e-08 65.1 345 24.3
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 4.7e-08 63.5 277 26.4
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 3.1e-07 60.8 465 23.9
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 2.0e-06 58.2 51 60.8
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 2.6e-06 57.8 239 26.4
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 2.6e-06 57.8 282 24.8
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 2.6e-06 57.8 419 23.6
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 3.4e-06 57.4 279 25.4
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 9.8e-06 55.8 302 23.8


User provided reference genes

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