Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 2.6e-74 282.0 139 100.0
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 2.4e-11 72.8 126 38.1
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 3.1e-11 72.4 117 42.7
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 4.0e-11 72.0 107 44.9
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 5.3e-11 71.6 82 47.6
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 5.3e-11 71.6 112 41.1
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 5.3e-11 71.6 112 41.1
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 5.3e-11 71.6 84 50.0
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 6.9e-11 71.2 109 42.2
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 1.5e-10 70.1 112 42.9
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 1.5e-10 70.1 75 50.7
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 2.0e-10 69.7 122 42.6
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 2.0e-10 69.7 101 41.6
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 2.0e-10 69.7 93 45.2
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.6e-10 69.3 67 53.7
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 3.4e-10 68.9 66 57.6
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.4e-10 68.9 99 39.4
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 3.4e-10 68.9 81 45.7
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 5.8e-10 68.2 111 40.5
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.8e-10 68.2 119 37.8
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.8e-10 68.2 119 38.7
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 7.6e-10 67.8 78 50.0
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 7.6e-10 67.8 78 50.0
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 9.9e-10 67.4 61 59.0
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 9.9e-10 67.4 61 59.0
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 9.9e-10 67.4 79 49.4
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 9.9e-10 67.4 62 58.1
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 1.3e-09 67.0 62 59.7
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.3e-09 67.0 131 42.0
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 1.3e-09 67.0 83 48.2
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 1.7e-09 66.6 60 60.0
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 1.7e-09 66.6 126 40.5
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 1.7e-09 66.6 78 43.6
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 2.2e-09 66.2 111 36.9
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 2.2e-09 66.2 127 37.0
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 2.9e-09 65.9 75 48.0
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 2.9e-09 65.9 59 55.9
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 2.9e-09 65.9 76 52.6
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 3.8e-09 65.5 78 53.8
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 3.8e-09 65.5 79 51.9
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 3.8e-09 65.5 63 55.6
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 4.9e-09 65.1 81 48.1
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 4.9e-09 65.1 81 51.9
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 4.9e-09 65.1 83 48.2
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 4.9e-09 65.1 97 43.3
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.9e-09 65.1 97 43.3
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 4.9e-09 65.1 124 37.9
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 4.9e-09 65.1 122 36.1
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 4.9e-09 65.1 61 54.1
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 6.4e-09 64.7 79 49.4
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 6.4e-09 64.7 79 49.4
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 8.4e-09 64.3 79 53.2
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 8.4e-09 64.3 79 46.8
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 8.4e-09 64.3 76 50.0
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 8.4e-09 64.3 130 41.5
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 8.4e-09 64.3 83 42.2
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 1.1e-08 63.9 79 53.2
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 1.1e-08 63.9 79 53.2
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.1e-08 63.9 97 42.3
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 1.1e-08 63.9 111 39.6
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 1.1e-08 63.9 93 44.1
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 1.4e-08 63.5 81 49.4
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 1.4e-08 63.5 109 38.5
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 1.4e-08 63.5 126 37.3
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.9e-08 63.2 131 40.5
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 1.9e-08 63.2 87 43.7
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 2.4e-08 62.8 81 48.1
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 2.4e-08 62.8 118 39.0
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 2.4e-08 62.8 62 56.5
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 3.2e-08 62.4 106 38.7
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 3.2e-08 62.4 71 46.5
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 3.2e-08 62.4 114 43.9
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 3.2e-08 62.4 79 49.4
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 4.2e-08 62.0 123 35.0
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 7.1e-08 61.2 81 43.2
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 7.1e-08 61.2 108 39.8
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 7.1e-08 61.2 84 46.4
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 9.3e-08 60.8 87 44.8
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 1.2e-07 60.5 105 40.0
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 1.2e-07 60.5 62 50.0
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 1.6e-07 60.1 59 50.8
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.6e-07 60.1 121 38.0
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 1.6e-07 60.1 127 36.2
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 2.1e-07 59.7 66 48.5
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 2.7e-07 59.3 118 39.8
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.7e-07 59.3 74 50.0
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 3.5e-07 58.9 65 50.8
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 4.6e-07 58.5 61 50.8
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.6e-07 58.5 66 50.0
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 6.0e-07 58.2 82 43.9
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 7.9e-07 57.8 80 47.5
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 1.0e-06 57.4 91 44.0
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 1.0e-06 57.4 78 43.6
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 1.3e-06 57.0 93 37.6
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 1.7e-06 56.6 77 44.2
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.7e-06 56.6 90 47.8
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 2.3e-06 56.2 134 37.3
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 2.3e-06 56.2 66 53.0
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 2.3e-06 56.2 90 47.8
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 3.0e-06 55.8 103 35.0
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 3.0e-06 55.8 41 61.0
Sc03g0002950 Simmondsia chinensis HOM05D006100 ORTHO05D007539 5.1e-06 55.1 50 62.0
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 8.7e-06 54.3 61 44.3


User provided reference genes

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