Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0617 Ceratophyllum demersum HOM05D000207 ORTHO05D001482 2.2e-35 151.8 78 100.0
TAR376G0484 Trochodendron aralioides HOM05D000207 ORTHO05D001482 2.8e-17 91.7 76 64.5
Nn5g29541 Nelumbo nucifera HOM05D000207 ORTHO05D001482 2.0e-15 85.5 77 62.3
ECA246G1549 Erigeron canadensis HOM05D000207 ORTHO05D001482 7.0e-13 77.0 77 51.9
GSVIVG01009685001 Vitis vinifera HOM05D000207 ORTHO05D001482 7.0e-13 77.0 77 55.8
Aqoxy5G01677 Aquilegia oxysepala HOM05D000207 ORTHO05D001482 9.2e-13 76.6 74 58.1
Lsat_1_v5_gn_5_28981 Lactuca sativa HOM05D000207 ORTHO05D001482 2.0e-12 75.5 77 50.6
Cc10_g03070 Coffea canephora HOM05D000207 ORTHO05D001482 3.5e-12 74.7 78 55.1
Cpa.g.sc64.71 Carica papaya HOM05D000207 ORTHO05D001482 5.9e-12 73.9 74 54.1
Cfa018136 Carpinus fangiana HOM05D000207 ORTHO05D001482 5.9e-12 73.9 77 55.8
Nitab4.5_0000110g0390 Nicotiana tabacum HOM05D000207 ORTHO05D001482 7.8e-12 73.6 78 56.4
HanXRQChr05g0151841 Helianthus annuus HOM05D000207 ORTHO05D001482 1.0e-11 73.2 77 51.9
MSTRG.1287 Avicennia marina HOM05D000207 ORTHO05D001482 2.9e-11 71.6 71 59.2
Nitab4.5_0003783g0080 Nicotiana tabacum HOM05D000207 ORTHO05D001482 2.9e-11 71.6 74 56.8
Gohir.D05G198600 Gossypium hirsutum HOM05D000207 ORTHO05D001482 3.9e-11 71.2 73 54.8
Hma1.2p1_0203F.1_g086520 Hydrangea macrophylla HOM05D000207 ORTHO05D001482 3.9e-11 71.2 76 52.6
Solyc04g080170.3 Solanum lycopersicum HOM05D000207 ORTHO05D001482 5.0e-11 70.9 74 56.8
Sopen04g033760 Solanum pennellii HOM05D000207 ORTHO05D001482 5.0e-11 70.9 74 56.8
CAN.G1126.41 Capsicum annuum HOM05D000207 ORTHO05D001482 1.1e-10 69.7 78 53.8
Ciclev10003473m.g Citrus clementina HOM05D000207 ORTHO05D001482 1.1e-10 69.7 67 58.2
Gorai.009G203700 Gossypium raimondii HOM05D000207 ORTHO05D001482 1.5e-10 69.3 73 53.4
Lj4C42T6 Lonicera japonica HOM05D000207 ORTHO05D001482 1.9e-10 68.9 55 67.3
Atru.chr13.514 Acer truncatum HOM05D000207 ORTHO05D001482 3.3e-10 68.2 62 59.7
Atru.chr8.2602 Acer truncatum HOM05D000207 ORTHO05D001482 3.3e-10 68.2 62 59.7
Thecc.08G024300 Theobroma cacao HOM05D000207 ORTHO05D001482 3.3e-10 68.2 73 52.1
Haze_17988 Corylus avellana HOM05D000207 ORTHO05D001482 4.3e-10 67.8 77 51.9
SGA_v2.0_scaffold48G18071 Striga asiatica HOM05D000207 ORTHO05D001482 4.3e-10 67.8 72 56.9
QL02p007910 Quercus lobata HOM05D000207 ORTHO05D001482 7.3e-10 67.0 76 50.0
Peaxi162Scf00690g00014 Petunia axillaris HOM05D000207 ORTHO05D001482 9.5e-10 66.6 55 67.3
CAN.G843.39 Capsicum annuum HOM05D000207 ORTHO05D001482 2.8e-09 65.1 62 53.2
Actinidia15314 Actinidia chinensis HOM05D000207 ORTHO05D001482 3.6e-09 64.7 55 65.5
ATR1102G061 Amborella trichopoda HOM05D000207 ORTHO05D001482 3.6e-09 64.7 63 50.8
SEGI_28478 Sequoiadendron giganteum HOM05D000207 ORTHO05D001482 4.7e-09 64.3 57 54.4
PSO170G6036 Papaver somniferum HOM05D000207 ORTHO05D001482 6.2e-09 63.9 72 48.6
PSO700G0304 Papaver somniferum HOM05D000207 ORTHO05D001482 6.2e-09 63.9 72 48.6
SGA_v2.0_scaffold24G10237 Striga asiatica HOM05D000207 ORTHO05D001482 1.0e-08 63.2 54 66.7
RcHm_v2.0_Chr7g0178091 Rosa chinensis HOM05D000207 ORTHO05D001482 1.4e-08 62.8 61 52.5
DCAR_012745 Daucus carota HOM05D000207 ORTHO05D001482 1.8e-08 62.4 62 53.2
FvH4_5g17560 Fragaria vesca HOM05D000207 ORTHO05D001482 1.8e-08 62.4 61 52.5
FAN04G0107 Fragaria x ananassa HOM05D000207 ORTHO05D001482 1.8e-08 62.4 61 52.5
FAN08G3461 Fragaria x ananassa HOM05D000207 ORTHO05D001482 1.8e-08 62.4 61 52.5
FAN13G1936 Fragaria x ananassa HOM05D000207 ORTHO05D001482 1.8e-08 62.4 61 52.5
Sc15g0006870 Simmondsia chinensis HOM05D000207 ORTHO05D001482 1.8e-08 62.4 73 52.1
THA.LOC104814158 Tarenaya hassleriana HOM05D000207 ORTHO05D001482 2.3e-08 62.0 66 56.1
Actinidia09074 Actinidia chinensis HOM05D000207 ORTHO05D001482 3.1e-08 61.6 62 53.2
Dinv19283 Davidia involucrata HOM05D000207 ORTHO05D001482 5.2e-08 60.8 62 51.6
Nitab4.5_0002450g0170 Nicotiana tabacum HOM05D000207 ORTHO05D001482 5.2e-08 60.8 66 50.0
Oeu036194.1 Olea europaea HOM05D000207 ORTHO05D001482 5.2e-08 60.8 58 62.1
vmacro17771 Vaccinium macrocarpon HOM05D000207 ORTHO05D001482 6.8e-08 60.5 62 50.0
Dinv06370 Davidia involucrata HOM05D000207 ORTHO05D001482 8.9e-08 60.1 62 50.0
CiPaw.16G055500 Carya illinoinensis HOM05D000207 ORTHO05D001482 1.2e-07 59.7 55 60.0
Nitab4.5_0002046g0090 Nicotiana tabacum HOM05D000207 ORTHO05D001482 1.2e-07 59.7 62 48.4
Solyc03g118530.3 Solanum lycopersicum HOM05D000207 ORTHO05D001482 1.5e-07 59.3 59 50.8
Sopen03g037470 Solanum pennellii HOM05D000207 ORTHO05D001482 1.5e-07 59.3 59 50.8
ClCG04G012870 Citrullus lanatus HOM05D000207 ORTHO05D001482 2.0e-07 58.9 61 50.8
Duzib084G1277 Durio zibethinus HOM05D000207 ORTHO05D001482 2.0e-07 58.9 61 49.2
Eucgr.H00538 Eucalyptus grandis HOM05D000207 ORTHO05D001482 2.0e-07 58.9 61 52.5
Sed0006423 Sechium edule HOM05D000207 ORTHO05D001482 2.0e-07 58.9 61 50.8
FAN18G3020 Fragaria x ananassa HOM05D000207 ORTHO05D001482 2.6e-07 58.5 45 62.2
CSS0008163 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D001482 3.4e-07 58.2 62 48.4
CSS0020226 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D001482 3.4e-07 58.2 62 48.4
MD06G1231500 Malus domestica HOM05D000207 ORTHO05D001482 3.4e-07 58.2 44 63.6
Nn4g24307 Nelumbo nucifera HOM05D000207 ORTHO05D001482 3.4e-07 58.2 62 48.4
Prupe.5G235400 Prunus persica HOM05D000207 ORTHO05D001482 3.4e-07 58.2 44 63.6
CiPaw.16G096700 Carya illinoinensis HOM05D000207 ORTHO05D001482 4.4e-07 57.8 44 63.6
Ciclev10007297m.g Citrus clementina HOM05D000207 ORTHO05D001482 4.4e-07 57.8 59 50.8
COL.COLO4_28879 Corchorus olitorius HOM05D000207 ORTHO05D001482 4.4e-07 57.8 59 50.8
MELO3C001921.2 Cucumis melo HOM05D000207 ORTHO05D001482 4.4e-07 57.8 61 49.2
Lalb_Chr05g0221561 Lupinus albus HOM05D000207 ORTHO05D001482 4.4e-07 57.8 58 50.0
Potri.012G044700 Populus trichocarpa HOM05D000207 ORTHO05D001482 4.4e-07 57.8 44 63.6
Thecc.03G059700 Theobroma cacao HOM05D000207 ORTHO05D001482 4.4e-07 57.8 59 50.8
Cfa019626 Carpinus fangiana HOM05D000207 ORTHO05D001482 5.8e-07 57.4 44 63.6
CiPaw.15G145300 Carya illinoinensis HOM05D000207 ORTHO05D001482 5.8e-07 57.4 52 57.7
Haze_18897 Corylus avellana HOM05D000207 ORTHO05D001482 5.8e-07 57.4 44 63.6
Gohir.A11G002700 Gossypium hirsutum HOM05D000207 ORTHO05D001482 5.8e-07 57.4 44 63.6
Gohir.D11G002300 Gossypium hirsutum HOM05D000207 ORTHO05D001482 5.8e-07 57.4 44 63.6
Gorai.007G003300 Gossypium raimondii HOM05D000207 ORTHO05D001482 5.8e-07 57.4 44 63.6
Potri.002G263000 Populus trichocarpa HOM05D000207 ORTHO05D001482 5.8e-07 57.4 67 52.2
CSS0007211 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D001482 7.5e-07 57.0 64 51.6
MD14G1238200 Malus domestica HOM05D000207 ORTHO05D001482 7.5e-07 57.0 44 61.4
SMO200G0074 Selaginella moellendorffii HOM05D000207 ORTHO05D001482 7.5e-07 57.0 61 50.8
SGA_v2.0_scaffold74G24660 Striga asiatica HOM05D000207 ORTHO05D001482 7.5e-07 57.0 62 48.4
arahy.Tifrunner.gnm1.ann1.R9E8HA Arachis hypogaea HOM05D000207 ORTHO05D001482 9.8e-07 56.6 44 63.6
arahy.Tifrunner.gnm1.ann1.ZH4NLG Arachis hypogaea HOM05D000207 ORTHO05D001482 9.8e-07 56.6 44 63.6
BcaC03g18141 Brassica carinata HOM05D000207 ORTHO05D001482 9.8e-07 56.6 75 44.0
Oeu031764.3 Olea europaea HOM05D000207 ORTHO05D001482 9.8e-07 56.6 62 48.4
Sabra15G0029400 Salix brachista HOM05D000207 ORTHO05D001482 9.8e-07 56.6 59 50.8
AUR62033097 Chenopodium quinoa HOM05D000207 ORTHO05D001482 1.3e-06 56.2 62 46.8
AUR62042014 Chenopodium quinoa HOM05D000207 ORTHO05D001482 1.3e-06 56.2 62 46.8
CsaV3_1G004940 Cucumis sativus L. HOM05D000207 ORTHO05D001482 1.3e-06 56.2 61 49.2
TWI15G0123 Tripterygium wilfordii HOM05D000207 ORTHO05D001482 1.3e-06 56.2 44 63.6
Ah.09g232290 Amaranthus hybridus HOM05D000207 ORTHO05D001482 1.7e-06 55.8 62 46.8
CAN.G423.36 Capsicum annuum HOM05D000207 ORTHO05D001482 1.7e-06 55.8 62 45.2
BolC2t12269H Brassica oleracea HOM05D000207 ORTHO05D001482 2.2e-06 55.5 73 43.8
Lalb_Chr14g0370651 Lupinus albus HOM05D000207 ORTHO05D001482 2.2e-06 55.5 44 61.4
Manes.14G172600 Manihot esculenta HOM05D000207 ORTHO05D001482 2.2e-06 55.5 52 55.8
Potri.015G035600 Populus trichocarpa HOM05D000207 ORTHO05D001482 2.2e-06 55.5 44 61.4
CDE11G0142 Ceratophyllum demersum HOM05D000207 ORTHO05D001482 2.9e-06 55.1 62 46.8
Cc04_g06050 Coffea canephora HOM05D000207 ORTHO05D001482 2.9e-06 55.1 44 61.4
Gohir.D09G169800 Gossypium hirsutum HOM05D000207 ORTHO05D001482 2.9e-06 55.1 61 47.5
TAR371G0331 Trochodendron aralioides HOM05D000207 ORTHO05D001482 2.9e-06 55.1 44 59.1
Aa31LG5G17200 Aethionema arabicum HOM05D000207 ORTHO05D001482 3.7e-06 54.7 75 50.7
Aa31sc145G40 Aethionema arabicum HOM05D000207 ORTHO05D001482 3.7e-06 54.7 75 50.7
Carub.0001s3558 Capsella rubella HOM05D000207 ORTHO05D001482 3.7e-06 54.7 72 48.6
Gohir.A09G175100 Gossypium hirsutum HOM05D000207 ORTHO05D001482 3.7e-06 54.7 61 47.5
Pp3c8_20800 Physcomitrium patens HOM05D000207 ORTHO05D001482 3.7e-06 54.7 63 46.0
QL10p031139 Quercus lobata HOM05D000207 ORTHO05D001482 3.7e-06 54.7 44 61.4
SalBow1G6464 Salvia bowleyana HOM05D000207 ORTHO05D001482 3.7e-06 54.7 73 43.8
Sc12g0007800 Simmondsia chinensis HOM05D000207 ORTHO05D001482 3.7e-06 54.7 53 52.8
Gorai.006G191300 Gossypium raimondii HOM05D000207 ORTHO05D001482 4.9e-06 54.3 59 49.2
CARHR093200 Cardamine hirsuta HOM05D000207 ORTHO05D001482 6.4e-06 53.9 49 55.1
Glyma.09G174000 Glycine max HOM05D000207 ORTHO05D001482 6.4e-06 53.9 65 46.2
PGR083G0979 Punica granatum HOM05D000207 ORTHO05D001482 6.4e-06 53.9 67 44.8
Sabra12G0031200 Salix brachista HOM05D000207 ORTHO05D001482 6.4e-06 53.9 44 59.1
AT3G17850 Arabidopsis thaliana HOM05D000207 ORTHO05D001482 8.3e-06 53.5 63 46.0
Migut.M00221 Erythranthe guttata HOM05D000207 ORTHO05D001482 8.3e-06 53.5 63 47.6
Medtr6g470940 Medicago truncatula HOM05D000207 ORTHO05D001482 8.3e-06 53.5 50 58.0
TPR.G25365 Trifolium pratense HOM05D000207 ORTHO05D001482 8.3e-06 53.5 65 47.7


User provided reference genes

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