Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0573 Ceratophyllum demersum HOM05D002556 ORTHO05D043876 0.0e+00 1548.1 808 100.0
CDE12G0155 Ceratophyllum demersum HOM05D002556 ORTHO05D043876 5.5e-310 1067.4 809 73.8
MBI19_g32770_MAGBIO Magnolia biondii HOM05D002556 ORTHO05D003153 2.0e-38 165.2 984 27.6
Nn3g21259 Nelumbo nucifera HOM05D002556 ORTHO05D003153 1.0e-34 152.9 759 27.4
Nn3g21262 Nelumbo nucifera HOM05D002556 ORTHO05D003153 1.0e-34 152.9 759 27.4
CiPaw.02G087500 Carya illinoinensis HOM05D002556 ORTHO05D003153 2.9e-29 134.8 639 27.2
GSVIVG01017825001 Vitis vinifera HOM05D002556 ORTHO05D003153 8.0e-27 126.7 737 25.1
CSS0029361 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 5.2e-26 124.0 957 25.1
Sed0002753 Sechium edule HOM05D002556 ORTHO05D003153 6.8e-26 123.6 626 26.4
COL.COLO4_13950 Corchorus olitorius HOM05D002556 ORTHO05D003153 2.6e-25 121.7 759 26.1
Atru.chr4.2739 Acer truncatum HOM05D002556 ORTHO05D003153 4.4e-25 120.9 627 26.5
ATR0706G247 Amborella trichopoda HOM05D002556 ORTHO05D003153 4.4e-25 120.9 764 25.8
CSS0044142 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 4.4e-25 120.9 946 24.9
Ciclev10004184m.g Citrus clementina HOM05D002556 ORTHO05D003153 7.5e-25 120.2 650 26.3
Nitab4.5_0000303g0020 Nicotiana tabacum HOM05D002556 ORTHO05D003153 9.8e-25 119.8 775 27.0
Hma1.2p1_0078F.1_g040880 Hydrangea macrophylla HOM05D002556 ORTHO05D003153 4.9e-24 117.5 909 26.4
Migut.N00129 Erythranthe guttata HOM05D002556 ORTHO05D003153 6.3e-24 117.1 596 26.8
Lj6g0020599 Lotus japonicus HOM05D002556 ORTHO05D003153 6.3e-24 117.1 687 28.1
MD16G1176700 Malus domestica HOM05D002556 ORTHO05D003153 8.3e-24 116.7 693 27.1
Solyc01g067790.3 Solanum lycopersicum HOM05D002556 ORTHO05D003153 4.1e-23 114.4 868 27.2
Zm00001eb417970 Zea mays HOM05D002556 ORTHO05D003153 5.4e-23 114.0 630 26.2
CAN.G185.4 Capsicum annuum HOM05D002556 ORTHO05D003153 7.0e-23 113.6 646 27.9
Prupe.1G143500 Prunus persica HOM05D002556 ORTHO05D003153 7.0e-23 113.6 939 24.2
TAR636G3468 Trochodendron aralioides HOM05D002556 ORTHO05D003153 3.5e-22 111.3 691 25.3
Nitab4.5_0006501g0050 Nicotiana tabacum HOM05D002556 ORTHO05D003153 4.5e-22 110.9 791 26.0
vmacro15271 Vaccinium macrocarpon HOM05D002556 ORTHO05D003153 5.9e-22 110.5 898 24.2
Cfa015509 Carpinus fangiana HOM05D002556 ORTHO05D003153 1.0e-21 109.8 707 26.9
MELO3C021370.2 Cucumis melo HOM05D002556 ORTHO05D003153 1.0e-21 109.8 620 26.5
EL10Ac3g06541 Beta vulgaris HOM05D002556 ORTHO05D003153 1.3e-21 109.4 624 25.3
PGSC0003DMG400022845 Solanum tuberosum HOM05D002556 ORTHO05D003153 1.3e-21 109.4 828 26.0
FAN22G1976 Fragaria x ananassa HOM05D002556 ORTHO05D003153 1.7e-21 109.0 800 26.8
Rhsim02G0014300 Rhododendron simsii HOM05D002556 ORTHO05D003153 1.7e-21 109.0 923 24.5
Manes.03G190200 Manihot esculenta HOM05D002556 ORTHO05D003153 3.8e-21 107.8 982 24.9
ClCG06G005460 Citrullus lanatus HOM05D002556 ORTHO05D003153 5.0e-21 107.5 626 25.4
Sopen01g029750 Solanum pennellii HOM05D002556 ORTHO05D003153 5.0e-21 107.5 984 25.1
Cpa.g.sc183.31 Carica papaya HOM05D002556 ORTHO05D003153 6.6e-21 107.1 647 27.2
FAN07G2116 Fragaria x ananassa HOM05D002556 ORTHO05D003153 6.6e-21 107.1 895 25.7
Peaxi162Scf01067g00025 Petunia axillaris HOM05D002556 ORTHO05D003153 6.6e-21 107.1 655 26.9
FAN12G2677 Fragaria x ananassa HOM05D002556 ORTHO05D003153 1.9e-20 105.5 891 24.9
Duzib212G1036 Durio zibethinus HOM05D002556 ORTHO05D003153 3.3e-20 104.8 788 25.6
Dinv44438 Davidia involucrata HOM05D002556 ORTHO05D003153 4.3e-20 104.4 830 24.0
Medtr2g020440 Medicago truncatula HOM05D002556 ORTHO05D003153 5.6e-20 104.0 695 25.5
PSO170G4494 Papaver somniferum HOM05D002556 ORTHO05D003153 5.6e-20 104.0 604 26.7
CsaV3_6G005660 Cucumis sativus L. HOM05D002556 ORTHO05D003153 7.3e-20 103.6 620 25.2
FAN12G0875 Fragaria x ananassa HOM05D002556 ORTHO05D003153 9.5e-20 103.2 891 24.8
FvH4_4g17010 Fragaria vesca HOM05D002556 ORTHO05D003153 1.2e-19 102.8 892 25.4
arahy.Tifrunner.gnm1.ann1.I12U39 Arachis hypogaea HOM05D002556 ORTHO05D003153 2.1e-19 102.1 676 26.2
Phvul.006G160300 Phaseolus vulgaris HOM05D002556 ORTHO05D003153 2.8e-19 101.7 668 25.6
Zm00001eb354310 Zea mays HOM05D002556 ORTHO05D003153 2.8e-19 101.7 633 25.6
Lsat_1_v5_gn_5_52200 Lactuca sativa HOM05D002556 ORTHO05D003153 3.6e-19 101.3 717 24.4
Thecc.04G275500 Theobroma cacao HOM05D002556 ORTHO05D003153 6.1e-19 100.5 786 25.7
Gohir.D02G051500 Gossypium hirsutum HOM05D002556 ORTHO05D003153 1.0e-18 99.8 665 25.1
Oeu022243.3 Olea europaea HOM05D002556 ORTHO05D003153 1.0e-18 99.8 649 24.7
arahy.Tifrunner.gnm1.ann1.CR3TYE Arachis hypogaea HOM05D002556 ORTHO05D003153 1.4e-18 99.4 723 25.6
FAN17G1599 Fragaria x ananassa HOM05D002556 ORTHO05D003153 1.4e-18 99.4 899 24.5
FAN20G3156 Fragaria x ananassa HOM05D002556 ORTHO05D003153 1.8e-18 99.0 608 25.5
FAN27G2445 Fragaria x ananassa HOM05D002556 ORTHO05D003153 1.8e-18 99.0 608 25.5
Os05g0147133 Oryza sativa ssp. japonica HOM05D002556 ORTHO05D003153 1.8e-18 99.0 606 25.9
Dinv38335 Davidia involucrata HOM05D002556 ORTHO05D003153 2.3e-18 98.6 1009 24.2
Potri.010G014700 Populus trichocarpa HOM05D002556 ORTHO05D003153 2.3e-18 98.6 868 24.5
MSTRG.24773 Avicennia marina HOM05D002556 ORTHO05D003153 3.0e-18 98.2 610 26.1
CANSAT78G1274 Cannabis sativa HOM05D002556 ORTHO05D003153 5.2e-18 97.4 682 26.1
Glyma.13G214200 Glycine max HOM05D002556 ORTHO05D003153 5.2e-18 97.4 617 26.9
Gorai.005G056800 Gossypium raimondii HOM05D002556 ORTHO05D003153 5.2e-18 97.4 667 25.0
QL06p006973 Quercus lobata HOM05D002556 ORTHO05D003153 5.2e-18 97.4 665 26.9
Sc13g0003690 Simmondsia chinensis HOM05D002556 ORTHO05D003153 5.2e-18 97.4 636 24.7
DCAR_027119 Daucus carota HOM05D002556 ORTHO05D003153 8.9e-18 96.7 623 24.1
Hund20629 Selenicereus undatus HOM05D002556 ORTHO05D003153 1.5e-17 95.9 644 26.1
Actinidia23440 Actinidia chinensis HOM05D002556 ORTHO05D003153 3.4e-17 94.7 968 23.0
Aqoxy5G00635 Aquilegia oxysepala HOM05D002556 ORTHO05D003153 3.4e-17 94.7 921 24.0
Gohir.A02G045500 Gossypium hirsutum HOM05D002556 ORTHO05D003153 4.4e-17 94.4 647 25.7
RcHm_v2.0_Chr4g0420701 Rosa chinensis HOM05D002556 ORTHO05D003153 4.4e-17 94.4 939 25.5
CSS0031733 Camellia sinensis var. sinensis HOM05D002556 ORTHO05D003153 5.7e-17 94.0 786 24.4
PSO447G0225 Papaver somniferum HOM05D002556 ORTHO05D003153 5.7e-17 94.0 220 34.1
PGR031G1073 Punica granatum HOM05D002556 ORTHO05D003153 5.7e-17 94.0 881 24.6
Sabra10G0010100 Salix brachista HOM05D002556 ORTHO05D003153 5.7e-17 94.0 932 23.8
Ca_00583_v3 Cicer arietinum L. HOM05D002556 ORTHO05D003153 1.3e-16 92.8 690 24.8
FvH4_2g24660 Fragaria vesca HOM05D002556 ORTHO05D003153 2.2e-16 92.0 613 24.5
AUR62042844 Chenopodium quinoa HOM05D002556 ORTHO05D003153 3.7e-16 91.3 671 23.8
MD13G1175000 Malus domestica HOM05D002556 ORTHO05D003153 8.3e-16 90.1 796 24.9
Eucgr.L01602 Eucalyptus grandis HOM05D002556 ORTHO05D003153 1.1e-15 89.7 678 27.0
Cc03_g02500 Coffea canephora HOM05D002556 ORTHO05D003153 2.4e-15 88.6 809 25.0
SalBow5G3428 Salvia bowleyana HOM05D002556 ORTHO05D003153 2.4e-15 88.6 642 24.0
FAN24G1081 Fragaria x ananassa HOM05D002556 ORTHO05D008572 4.1e-15 87.8 617 25.0
TWI09G1603 Tripterygium wilfordii HOM05D002556 ORTHO05D003153 7.0e-15 87.0 706 24.5
MBI14_g12130_MAGBIO Magnolia biondii HOM05D002556 ORTHO05D003153 1.2e-14 86.3 172 36.6
TPR.G1514 Trifolium pratense HOM05D002556 ORTHO05D003153 1.6e-14 85.9 710 25.4
Gohir.D10G165600 Gossypium hirsutum HOM05D002556 ORTHO05D003153 2.7e-14 85.1 699 23.7
Gorai.011G184800 Gossypium raimondii HOM05D002556 ORTHO05D003153 2.7e-14 85.1 699 23.9
HanXRQChr13g0410841 Helianthus annuus HOM05D002556 ORTHO05D003153 2.7e-14 85.1 703 24.5
SalBow5G3083 Salvia bowleyana HOM05D002556 ORTHO05D003153 4.6e-14 84.3 636 23.4
Haze_04805 Corylus avellana HOM05D002556 ORTHO05D003153 7.8e-14 83.6 686 24.5
Eucgr.B01260 Eucalyptus grandis HOM05D002556 ORTHO05D003153 7.8e-14 83.6 846 24.9
PSO302G0052 Papaver somniferum HOM05D002556 ORTHO05D003153 7.8e-14 83.6 633 26.1
VMungo0540G1404 Vigna mungo HOM05D002556 ORTHO05D003153 7.8e-14 83.6 658 24.8
Nitab4.5_0001624g0020 Nicotiana tabacum HOM05D002556 ORTHO05D003153 1.0e-13 83.2 640 26.7
Duzib151G1179 Durio zibethinus HOM05D002556 ORTHO05D003153 1.7e-13 82.4 780 23.8
Lj6C667G18 Lonicera japonica HOM05D002556 ORTHO05D003153 1.7e-13 82.4 915 24.7
Psat1g186720 Pisum sativum HOM05D002556 ORTHO05D003153 6.6e-13 80.5 291 28.5
Thhalv10019982m.g Eutrema salsugineum HOM05D002556 ORTHO05D003153 8.6e-13 80.1 599 24.2
Solyc06g008840.3 Solanum lycopersicum HOM05D002556 ORTHO05D003153 8.6e-13 80.1 574 23.9
AUR62040727 Chenopodium quinoa HOM05D002556 ORTHO05D003153 1.1e-12 79.7 632 22.8
BcaC05g28159 Brassica carinata HOM05D002556 ORTHO05D003153 1.5e-12 79.3 674 24.0
Haze_01041 Corylus avellana HOM05D002556 ORTHO05D003153 2.5e-12 78.6 794 23.4
HanXRQChr03g0079431 Helianthus annuus HOM05D002556 ORTHO05D003153 2.5e-12 78.6 733 22.5
Actinidia40218 Actinidia chinensis HOM05D002556 ORTHO05D003153 3.3e-12 78.2 820 24.0
Rhsim04G0215200 Rhododendron simsii HOM05D002556 ORTHO05D003153 3.3e-12 78.2 580 26.2
DCAR_002786 Daucus carota HOM05D001702 ORTHO05D003153 4.3e-12 77.8 840 23.0
vmacro08216 Vaccinium macrocarpon HOM05D002556 ORTHO05D003153 5.6e-12 77.4 586 24.9
C05p41940 Brassica napus HOM05D002556 ORTHO05D003153 7.3e-12 77.0 674 24.3
BolC5t32928H Brassica oleracea HOM05D002556 ORTHO05D003153 7.3e-12 77.0 674 24.3
CiPaw.01G154300 Carya illinoinensis HOM05D002556 ORTHO05D003153 7.3e-12 77.0 663 23.4
Lalb_Chr18g0055801 Lupinus albus HOM05D002556 ORTHO05D003153 7.3e-12 77.0 914 24.3
SGA_v2.0_scaffold371G50142 Striga asiatica HOM05D002556 ORTHO05D003153 1.2e-11 76.3 351 28.2
Ciclev10018752m.g Citrus clementina HOM05D002556 ORTHO05D003153 1.6e-11 75.9 680 24.1
DCAR_024620 Daucus carota HOM05D002556 ORTHO05D003153 1.6e-11 75.9 758 25.2
Lsat_1_v5_gn_9_5201 Lactuca sativa HOM05D002556 ORTHO05D003153 1.6e-11 75.9 595 25.0
Gohir.A10G102045 Gossypium hirsutum HOM05D002556 ORTHO05D003153 4.7e-11 74.3 701 23.1
Aqoxy2G03140 Aquilegia oxysepala HOM05D002556 ORTHO05D003153 6.2e-11 73.9 638 24.1
CiPaw.08G100700 Carya illinoinensis HOM05D002556 ORTHO05D003153 6.2e-11 73.9 205 30.7
Dinv32988 Davidia involucrata HOM05D002556 ORTHO05D003153 8.0e-11 73.6 722 22.9
Atru.chr5.1286 Acer truncatum HOM05D002556 ORTHO05D003153 1.4e-10 72.8 669 24.5
Glyma.15G099000 Glycine max HOM05D002556 ORTHO05D003153 1.4e-10 72.8 874 24.8
PSO210G2558 Papaver somniferum HOM05D002556 ORTHO05D003153 1.8e-10 72.4 427 27.4
CDE12G0271 Ceratophyllum demersum HOM05D002556 ORTHO05D003153 3.1e-10 71.6 34 91.2
MD11G1297500 Malus domestica HOM05D002556 ORTHO05D003153 3.1e-10 71.6 646 25.9
Manes.15G018000 Manihot esculenta HOM05D002556 ORTHO05D003153 4.0e-10 71.2 975 23.6
THA.LOC104821764 Tarenaya hassleriana HOM05D002556 ORTHO05D003153 5.2e-10 70.9 616 25.2
A05p27170 Brassica napus HOM05D002556 ORTHO05D003153 6.8e-10 70.5 710 22.8
Potri.014G135520 Populus trichocarpa HOM05D002556 ORTHO05D003153 6.8e-10 70.5 595 25.0
PGSC0003DMG401021989 Solanum tuberosum HOM05D002556 ORTHO05D003153 6.8e-10 70.5 615 22.9
BraA05t21606Z Brassica rapa HOM05D002556 ORTHO05D003153 2.0e-09 68.9 812 23.2
Sp6g03170 Schrenkiella parvula HOM05D002556 ORTHO05D003153 2.0e-09 68.9 570 22.3
RcHm_v2.0_Chr6g0292491 Rosa chinensis HOM05D002556 ORTHO05D003153 2.6e-09 68.6 623 24.6
Aa31LG8G8160 Aethionema arabicum HOM05D002556 ORTHO05D003153 3.4e-09 68.2 578 24.7
FAN15G0898 Fragaria x ananassa HOM05D002556 ORTHO05D003153 7.5e-09 67.0 517 23.6
Peaxi162Scf00936g00220 Petunia axillaris HOM05D002556 ORTHO05D003153 7.5e-09 67.0 584 22.4
TPR.G32302 Trifolium pratense HOM05D002556 ORTHO05D003153 7.5e-09 67.0 650 24.0
BolC9t53185H Brassica oleracea HOM05D002556 ORTHO05D003153 9.8e-09 66.6 65 46.2
Medtr7g107650 Medicago truncatula HOM05D002556 ORTHO05D003153 1.7e-08 65.9 590 22.9
CARHR097420 Cardamine hirsuta HOM05D002556 ORTHO05D003153 2.9e-08 65.1 857 22.6
Sabra14G0101500 Salix brachista HOM05D002556 ORTHO05D008572 3.7e-08 64.7 595 24.2
THA.LOC104801564 Tarenaya hassleriana HOM05D002556 ORTHO05D003153 4.9e-08 64.3 632 23.6
TWI59G0577 Tripterygium wilfordii HOM05D002556 ORTHO05D003153 4.9e-08 64.3 695 24.6
Aa31LG5G2660 Aethionema arabicum HOM05D002556 ORTHO05D003153 6.4e-08 63.9 581 23.9
FAN20G2016 Fragaria x ananassa HOM05D002556 ORTHO05D003153 8.3e-08 63.5 522 23.9
QL07p015831 Quercus lobata HOM05D002556 ORTHO05D003153 8.3e-08 63.5 121 35.5
TWI59G0842 Tripterygium wilfordii HOM05D002556 ORTHO05D003153 8.3e-08 63.5 695 24.6
Ah.08g212730 Amaranthus hybridus HOM05D002556 ORTHO05D008572 1.4e-07 62.8 80 43.8
MBI14_g12131_MAGBIO Magnolia biondii HOM05D002556 ORTHO05D003153 1.4e-07 62.8 365 29.9
Prupe.8G251900 Prunus persica HOM05D002556 ORTHO05D003153 1.4e-07 62.8 677 22.9
Thhalv10028474m.g Eutrema salsugineum HOM05D002556 ORTHO05D003153 2.4e-07 62.0 570 20.9
Sopen06g003600 Solanum pennellii HOM05D002556 ORTHO05D003153 2.4e-07 62.0 569 23.9
Carub.0006s3392 Capsella rubella HOM05D002556 ORTHO05D003153 3.2e-07 61.6 564 22.3
ECA240G3552 Erigeron canadensis HOM05D002556 ORTHO05D003153 3.2e-07 61.6 94 42.6
Ca_09110_v3 Cicer arietinum L. HOM05D002556 ORTHO05D003153 5.4e-07 60.8 631 23.6
Lj1g0013257 Lotus japonicus HOM05D002556 ORTHO05D003153 5.4e-07 60.8 65 41.5
SGA_v2.0_scaffold11G05759 Striga asiatica HOM05D002556 ORTHO05D003153 7.0e-07 60.5 620 23.9
vmacro14958 Vaccinium macrocarpon HOM05D002556 ORTHO05D003153 7.0e-07 60.5 90 40.0
COL.COLO4_08035 Corchorus olitorius HOM05D002556 ORTHO05D003153 9.2e-07 60.1 221 28.1
AL6G49810 Arabidopsis lyrata HOM05D002556 ORTHO05D003153 1.2e-06 59.7 587 22.7
Psat3g024920 Pisum sativum HOM05D002556 ORTHO05D003153 1.2e-06 59.7 605 23.8
Glyma.13G213900 Glycine max HOM05D002556 ORTHO05D003153 2.0e-06 58.9 100 42.0
TAR362G0960 Trochodendron aralioides HOM05D002556 ORTHO05D018153 2.0e-06 58.9 201 31.8
Actinidia21081 Actinidia chinensis HOM05D002556 ORTHO05D003153 2.7e-06 58.5 88 39.8
Gohir.A08G071800 Gossypium hirsutum HOM05D002556 ORTHO05D003153 2.7e-06 58.5 696 22.7
AL3G35570 Arabidopsis lyrata HOM05D002556 ORTHO05D003153 3.5e-06 58.2 202 30.2
Medtr3g113850 Medicago truncatula HOM05D002556 ORTHO05D003153 3.5e-06 58.2 93 36.6
ClCG09G006520 Citrullus lanatus HOM05D002556 ORTHO05D003153 4.6e-06 57.8 78 39.7
Migut.D00231 Erythranthe guttata HOM05D002556 ORTHO05D003153 4.6e-06 57.8 621 23.0
CAN.G1006.25 Capsicum annuum HOM05D002556 ORTHO05D003153 7.8e-06 57.0 596 24.2
Lalb_Chr18g0047501 Lupinus albus HOM05D002556 ORTHO05D003153 7.8e-06 57.0 100 38.0


User provided reference genes

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