Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0537 Ceratophyllum demersum HOM05D004163 ORTHO05D004882 5.7e-110 401.0 210 100.0
CDE02G0060 Ceratophyllum demersum HOM05D004163 ORTHO05D004882 6.2e-64 248.1 280 56.8
Nn1g07844 Nelumbo nucifera HOM05D004163 ORTHO05D004882 7.1e-44 181.4 293 45.7
QL09p054666 Quercus lobata HOM05D004163 ORTHO05D004882 7.4e-41 171.4 271 46.1
Cpa.g.sc8.162 Carica papaya HOM05D004163 ORTHO05D004882 6.2e-40 168.3 279 43.4
GSVIVG01028648001 Vitis vinifera HOM05D004163 ORTHO05D004882 6.2e-40 168.3 256 48.0
Nn3g19955 Nelumbo nucifera HOM05D004163 ORTHO05D004882 4.0e-39 165.6 288 42.7
Thecc.01G226700 Theobroma cacao HOM05D004163 ORTHO05D004882 6.9e-39 164.9 275 42.5
FAN15G0391 Fragaria x ananassa HOM05D004163 ORTHO05D004882 1.5e-38 163.7 269 45.0
Gohir.A08G194200 Gossypium hirsutum HOM05D004163 ORTHO05D004882 1.5e-38 163.7 284 42.3
TWI18G0775 Tripterygium wilfordii HOM05D004163 ORTHO05D004882 1.5e-38 163.7 288 42.4
ATR0736G127 Amborella trichopoda HOM05D004163 ORTHO05D004882 2.6e-38 162.9 298 41.3
Migut.D00532 Erythranthe guttata HOM05D004163 ORTHO05D004882 2.6e-38 162.9 260 46.2
CANSAT01G0846 Cannabis sativa HOM05D004163 ORTHO05D004882 3.4e-38 162.5 280 42.5
FvH4_4g33290 Fragaria vesca HOM05D004163 ORTHO05D004882 3.4e-38 162.5 269 45.0
Lj2A1132G68 Lonicera japonica HOM05D004163 ORTHO05D004882 4.5e-38 162.2 270 44.4
Medtr7g058510 Medicago truncatula HOM05D004163 ORTHO05D004882 4.5e-38 162.2 280 42.5
Aqoxy2G03890 Aquilegia oxysepala HOM05D004163 ORTHO05D004882 5.8e-38 161.8 282 42.6
Gohir.D08G212000 Gossypium hirsutum HOM05D004163 ORTHO05D004882 5.8e-38 161.8 284 41.2
Gorai.004G225400 Gossypium raimondii HOM05D004163 ORTHO05D004882 5.8e-38 161.8 284 41.5
Potri.002G241700 Populus trichocarpa HOM05D004163 ORTHO05D004882 5.8e-38 161.8 288 42.4
Dinv19207 Davidia involucrata HOM05D004163 ORTHO05D004882 7.6e-38 161.4 284 44.4
Nitab4.5_0000045g0110 Nicotiana tabacum HOM05D004163 ORTHO05D004882 7.6e-38 161.4 260 45.0
Nitab4.5_0006192g0030 Nicotiana tabacum HOM05D004163 ORTHO05D004882 7.6e-38 161.4 260 44.2
Duzib133G0118 Durio zibethinus HOM05D004163 ORTHO05D004882 1.0e-37 161.0 286 40.2
TAR633G1583 Trochodendron aralioides HOM05D004163 ORTHO05D004882 1.3e-37 160.6 300 41.0
PGR044G0385 Punica granatum HOM05D004163 ORTHO05D004882 2.2e-37 159.8 277 42.2
COL.COLO4_08179 Corchorus olitorius HOM05D004163 ORTHO05D004882 2.9e-37 159.5 282 40.8
Atru.chr5.2002 Acer truncatum HOM05D004163 ORTHO05D004882 3.8e-37 159.1 298 40.6
Manes.12G047002 Manihot esculenta HOM05D004163 ORTHO05D004882 3.8e-37 159.1 283 42.8
Psat3g145080 Pisum sativum HOM05D004163 ORTHO05D004882 4.9e-37 158.7 276 40.2
TWI36G1488 Tripterygium wilfordii HOM05D004163 ORTHO05D004882 4.9e-37 158.7 289 43.9
Sabra02G0184100 Salix brachista HOM05D004163 ORTHO05D004882 6.5e-37 158.3 293 41.3
Aa31LG5G17650 Aethionema arabicum HOM05D004163 ORTHO05D004882 8.4e-37 157.9 250 44.8
vmacro14756 Vaccinium macrocarpon HOM05D004163 ORTHO05D004882 8.4e-37 157.9 275 44.0
CiPaw.04G105700 Carya illinoinensis HOM05D004163 ORTHO05D004882 1.1e-36 157.5 280 41.1
RcHm_v2.0_Chr6g0284951 Rosa chinensis HOM05D004163 ORTHO05D004882 1.1e-36 157.5 271 45.0
Prupe.8G203600 Prunus persica HOM05D004163 ORTHO05D004882 1.4e-36 157.1 272 43.4
PGSC0003DMG400017659 Solanum tuberosum HOM05D004163 ORTHO05D004882 1.4e-36 157.1 267 43.4
MD10G1165200 Malus domestica HOM05D004163 ORTHO05D004882 1.9e-36 156.8 272 45.6
CiPaw.03G150300 Carya illinoinensis HOM05D004163 ORTHO05D004882 2.5e-36 156.4 279 43.4
MSTRG.21422 Avicennia marina HOM05D004163 ORTHO05D004882 3.2e-36 156.0 279 43.0
CSS0028699 Camellia sinensis var. sinensis HOM05D004163 ORTHO05D004882 4.2e-36 155.6 262 42.0
Eucgr.K02173 Eucalyptus grandis HOM05D004163 ORTHO05D004882 4.2e-36 155.6 277 41.5
Gohir.A11G137300 Gossypium hirsutum HOM05D004163 ORTHO05D004882 4.2e-36 155.6 287 39.4
CSS0045261 Camellia sinensis var. sinensis HOM05D004163 ORTHO05D004882 5.5e-36 155.2 262 42.0
Solyc09g061310.3 Solanum lycopersicum HOM05D004163 ORTHO05D004882 7.1e-36 154.8 269 43.1
Ca_07522_v3 Cicer arietinum L. HOM05D004163 ORTHO05D004882 9.3e-36 154.5 287 41.1
Sopen09g024070 Solanum pennellii HOM05D004163 ORTHO05D004882 9.3e-36 154.5 269 43.9
Gohir.D11G143700 Gossypium hirsutum HOM05D004163 ORTHO05D004882 1.2e-35 154.1 287 40.1
FAN27G1937 Fragaria x ananassa HOM05D004163 ORTHO05D004882 1.6e-35 153.7 260 43.8
Phvul.008G125200 Phaseolus vulgaris HOM05D004163 ORTHO05D004882 1.6e-35 153.7 263 42.6
Actinidia37588 Actinidia chinensis HOM05D004163 ORTHO05D004882 2.1e-35 153.3 289 41.5
SGA_v2.0_scaffold1G00744 Striga asiatica HOM05D004163 ORTHO05D004882 2.1e-35 153.3 267 43.8
Gorai.007G153900 Gossypium raimondii HOM05D004163 ORTHO05D004882 2.7e-35 152.9 288 41.0
MD05G1176500 Malus domestica HOM05D004163 ORTHO05D004882 2.7e-35 152.9 273 42.1
Hund05534 Selenicereus undatus HOM05D004163 ORTHO05D004882 2.7e-35 152.9 286 40.6
Hund05538 Selenicereus undatus HOM05D004163 ORTHO05D004882 2.7e-35 152.9 286 40.6
Cc01_g17110 Coffea canephora HOM05D004163 ORTHO05D004882 3.5e-35 152.5 277 43.0
Actinidia30080 Actinidia chinensis HOM05D004163 ORTHO05D004882 4.6e-35 152.1 289 41.5
DCAR_012637 Daucus carota HOM05D004163 ORTHO05D004882 4.6e-35 152.1 266 43.2
arahy.Tifrunner.gnm1.ann1.IH4GAK Arachis hypogaea HOM05D004163 ORTHO05D004882 6.0e-35 151.8 281 42.3
Manes.13G045400 Manihot esculenta HOM05D004163 ORTHO05D004882 6.0e-35 151.8 288 41.3
VMungo1383G2575 Vigna mungo HOM05D004163 ORTHO05D004882 6.0e-35 151.8 260 42.7
Lj1g0012524 Lotus japonicus HOM05D004163 ORTHO05D004882 7.9e-35 151.4 275 41.1
MSTRG.17551 Avicennia marina HOM05D004163 ORTHO05D004882 1.0e-34 151.0 286 42.0
Zm00001eb258670 Zea mays HOM05D004163 ORTHO05D004882 1.0e-34 151.0 256 43.4
MBI10_g18940_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 1.8e-34 150.2 302 41.1
Peaxi162Scf00107g01625 Petunia axillaris HOM05D004163 ORTHO05D004882 1.8e-34 150.2 284 42.3
BcaC05g29756 Brassica carinata HOM05D004163 ORTHO05D004882 3.9e-34 149.1 278 39.6
ClCG09G009070 Citrullus lanatus HOM05D004163 ORTHO05D004882 6.7e-34 148.3 265 41.5
Lalb_Chr01g0022371 Lupinus albus HOM05D004163 ORTHO05D004882 6.7e-34 148.3 255 43.5
BraA05t22837Z Brassica rapa HOM05D001545 ORTHO05D001600 8.7e-34 147.9 271 40.2
Hma1.2p1_0970F.1_g242660 Hydrangea macrophylla HOM05D004163 ORTHO05D004882 8.7e-34 147.9 268 46.3
arahy.Tifrunner.gnm1.ann1.PP5Q2Q Arachis hypogaea HOM05D004163 ORTHO05D004882 1.5e-33 147.1 281 39.9
CsaV3_7G025890 Cucumis sativus L. HOM05D004163 ORTHO05D004882 1.5e-33 147.1 265 42.6
PSO339G2763 Papaver somniferum HOM05D004163 ORTHO05D004882 1.5e-33 147.1 264 43.2
Sed0004920 Sechium edule HOM05D004163 ORTHO05D004882 1.5e-33 147.1 263 41.8
AL3G18320 Arabidopsis lyrata HOM05D004163 ORTHO05D004882 1.9e-33 146.7 268 41.4
BolC5t34677H Brassica oleracea HOM05D001545 ORTHO05D001600 1.9e-33 146.7 277 40.4
Lalb_Chr03g0041791 Lupinus albus HOM05D004163 ORTHO05D004882 1.9e-33 146.7 261 42.9
PSO832G2991 Papaver somniferum HOM05D004163 ORTHO05D004882 1.9e-33 146.7 264 42.4
AT3G07090 Arabidopsis thaliana HOM05D004163 ORTHO05D004882 2.5e-33 146.4 263 40.7
BcaB04g21309 Brassica carinata HOM05D004163 ORTHO05D004882 2.5e-33 146.4 249 43.0
C05p60290 Brassica napus HOM05D001545 ORTHO05D001600 3.3e-33 146.0 277 39.4
BcaC09g47939 Brassica carinata HOM05D004163 ORTHO05D004882 4.3e-33 145.6 256 41.8
BolC1t05569H Brassica oleracea HOM05D001545 ORTHO05D001600 4.3e-33 145.6 256 41.8
Carub.0003s0660 Capsella rubella HOM05D004163 ORTHO05D004882 4.3e-33 145.6 269 42.0
TPR.G9029 Trifolium pratense HOM05D004163 ORTHO05D004882 4.3e-33 145.6 275 38.9
BNapus_Darmor_BZH_scaffold_109p00240 Brassica napus HOM05D001545 ORTHO05D001600 5.7e-33 145.2 245 42.4
PSO339G4819 Papaver somniferum HOM05D004163 ORTHO05D004882 5.7e-33 145.2 264 42.8
AUR62008905 Chenopodium quinoa HOM05D004163 ORTHO05D004882 7.4e-33 144.8 287 39.0
Glyma.08G354700 Glycine max HOM05D004163 ORTHO05D004882 9.6e-33 144.4 278 39.9
CAN.G154.3 Capsicum annuum HOM05D004163 ORTHO05D004882 1.3e-32 144.1 265 40.4
Aa31sc164G40 Aethionema arabicum HOM05D004163 ORTHO05D004882 1.6e-32 143.7 269 40.1
BcaC05g29838 Brassica carinata HOM05D004163 ORTHO05D004882 1.6e-32 143.7 277 39.7
ECA236G3105 Erigeron canadensis HOM05D004163 ORTHO05D004882 2.1e-32 143.3 235 43.0
ECA247G0816 Erigeron canadensis HOM05D004163 ORTHO05D004882 2.1e-32 143.3 266 41.7
PSO675G2819 Papaver somniferum HOM05D004163 ORTHO05D004882 2.1e-32 143.3 260 43.1
THA.LOC104822505 Tarenaya hassleriana HOM05D004163 ORTHO05D004882 2.1e-32 143.3 272 41.9
Ciclev10021450m.g Citrus clementina HOM05D004163 ORTHO05D004882 3.7e-32 142.5 294 39.8
Glyma.18G170900 Glycine max HOM05D004163 ORTHO05D004882 6.2e-32 141.7 277 39.4
Thhalv10021308m.g Eutrema salsugineum HOM05D004163 ORTHO05D004882 8.2e-32 141.4 281 39.9
HanXRQChr15g0468291 Helianthus annuus HOM05D004163 ORTHO05D004882 8.2e-32 141.4 267 40.1
Rhsim13G0044700 Rhododendron simsii HOM05D004163 ORTHO05D004882 8.2e-32 141.4 285 40.4
BcaB04g21311 Brassica carinata HOM05D004163 ORTHO05D004882 1.1e-31 141.0 260 40.8
Sp3g06030 Schrenkiella parvula HOM05D004163 ORTHO05D004882 1.1e-31 141.0 279 39.4
CARHR081680 Cardamine hirsuta HOM05D004163 ORTHO05D004882 1.4e-31 140.6 268 41.8
Sed0020546 Sechium edule HOM05D004163 ORTHO05D004882 1.4e-31 140.6 269 39.8
unitig_22.g6322 Utricularia gibba HOM05D004163 ORTHO05D004882 3.1e-31 139.4 266 40.6
HanXRQChr10g0279771 Helianthus annuus HOM05D004163 ORTHO05D004882 5.3e-31 138.7 269 40.1
A05p41110 Brassica napus HOM05D004163 ORTHO05D004882 9.0e-31 137.9 264 39.4
Os02g0814000 Oryza sativa ssp. japonica HOM05D004163 ORTHO05D004882 9.0e-31 137.9 255 42.7
DCAR_000532 Daucus carota HOM05D004163 ORTHO05D004882 2.0e-30 136.7 255 40.4
vmacro02754 Vaccinium macrocarpon HOM05D004163 ORTHO05D004882 2.0e-30 136.7 280 38.6
AUR62031805 Chenopodium quinoa HOM05D004163 ORTHO05D004882 1.0e-29 134.4 286 38.1
HPP92_008969 Vanilla planifolia HOM05D004163 ORTHO05D004882 5.0e-29 132.1 259 40.9
BraA01t04398Z Brassica rapa HOM05D004163 ORTHO05D004882 8.4e-29 131.3 245 40.8
HanXRQChr10g0287331 Helianthus annuus HOM05D004163 ORTHO05D004882 9.3e-28 127.9 234 41.9
Duzib138G0078 Durio zibethinus HOM05D004163 ORTHO05D004882 2.1e-27 126.7 262 37.4
AagrBONN_evm.TU.Sc2ySwM_117.3750 Anthoceros agrestis HOM05D004163 ORTHO05D004882 4.6e-27 125.6 286 38.1
HanXRQChr04g0110741 Helianthus annuus HOM05D004163 ORTHO05D004882 2.3e-26 123.2 237 40.1
Os10g0472400 Oryza sativa ssp. japonica HOM05D004163 ORTHO05D004882 2.3e-26 123.2 277 37.9
Mapoly0051s0047 Marchantia polymorpha HOM05D004163 ORTHO05D004882 1.5e-25 120.6 289 36.7
Lsat_1_v5_gn_5_180180 Lactuca sativa HOM05D004163 ORTHO05D004882 1.8e-23 113.6 262 37.0
MD05G1176100 Malus domestica HOM05D004163 ORTHO05D004882 2.0e-22 110.2 64 76.6
Zm00001eb221910 Zea mays HOM05D004163 ORTHO05D004882 2.2e-21 106.7 284 33.1
FvH4_2g19170 Fragaria vesca HOM05D004163 ORTHO05D004882 3.8e-21 105.9 180 42.2
Pp3c14_10250 Physcomitrium patens HOM05D004163 ORTHO05D004882 5.5e-20 102.1 305 34.4
Eucgr.K02178 Eucalyptus grandis HOM05D004163 ORTHO05D004882 7.2e-20 101.7 241 37.3
BcaC06g35635 Brassica carinata HOM05D004163 ORTHO05D004882 1.2e-19 100.9 194 41.8
TAR362G1211 Trochodendron aralioides HOM05D004163 ORTHO05D004882 2.7e-19 99.8 273 34.8
CBR_g567 Chara braunii HOM05D004163 ORTHO05D004882 3.6e-19 99.4 67 73.1
SMO146G0295 Selaginella moellendorffii HOM05D004163 ORTHO05D004882 3.0e-18 96.3 266 35.3
Os02g0788133 Oryza sativa ssp. japonica HOM05D004163 ORTHO05D004882 3.3e-17 92.8 57 73.7
CsaV3_3G029920 Cucumis sativus L. HOM05D004163 ORTHO05D004882 4.3e-17 92.4 281 32.4
Cpa.g.sc997.5 Carica papaya HOM05D004163 ORTHO05D004882 5.7e-17 92.0 290 32.1
PRCOL_00000114 Prasinoderma coloniale HOM05D004163 ORTHO05D004882 5.3e-15 85.5 64 57.8
MCO11G711 Micromonas commoda HOM05D004163 ORTHO05D004882 2.9e-13 79.7 61 57.4
Pp3c11_1330 Physcomitrium patens HOM05D004163 ORTHO05D004882 3.8e-13 79.3 66 54.5
Cre12.g555850 Chlamydomonas reinhardtii HOM05D004163 ORTHO05D004882 5.0e-13 79.0 66 54.5
MBI05_g08208_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 1.1e-12 77.8 219 35.6
Lsat_1_v5_gn_9_12141 Lactuca sativa HOM05D004163 ORTHO05D004882 4.2e-12 75.9 223 35.0
Lsat_1_v5_gn_8_90020 Lactuca sativa HOM05D004163 ORTHO05D004882 2.1e-11 73.6 199 36.2
MBI16_g22910_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 2.7e-11 73.2 261 31.0
EL10Ac7g17826 Beta vulgaris HOM05D004163 ORTHO05D004882 3.6e-11 72.8 105 47.6
MBI05_g47552_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 3.6e-11 72.8 217 34.1
MBI05_g47467_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 6.1e-11 72.0 64 60.9
Sc24g0003580 Simmondsia chinensis HOM05D004163 ORTHO05D004882 1.0e-10 71.2 102 51.0
Haze_24789 Corylus avellana HOM05D004163 ORTHO05D004882 3.9e-10 69.3 109 44.0
C07p01620 Brassica napus HOM05D004163 ORTHO05D004882 4.4e-09 65.9 32 81.2
MELO3C026664.2 Cucumis melo HOM05D004163 ORTHO05D004882 4.4e-09 65.9 253 30.8
MBI18_g31614_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 4.4e-09 65.9 102 46.1
Peaxi162Scf00107g01626 Petunia axillaris HOM05D004163 ORTHO05D004882 7.4e-09 65.1 98 45.9
MBI15_g26747_MAGBIO Magnolia biondii HOM05D004163 ORTHO05D004882 9.7e-09 64.7 243 30.9
MSTRG.18388 Avicennia marina HOM05D004163 ORTHO05D004882 1.7e-08 63.9 36 77.8
C07p01970 Brassica napus HOM05D004163 ORTHO05D004882 2.8e-08 63.2 30 86.7
C07p12700 Brassica napus HOM05D004163 ORTHO05D004882 2.8e-08 63.2 30 86.7
Hma1.2p1_0812F.1_g222380 Hydrangea macrophylla HOM05D004163 ORTHO05D004882 3.7e-08 62.8 103 46.6
MELO3C021008.2 Cucumis melo HOM05D004163 ORTHO05D004882 1.1e-07 61.2 104 42.3
C07p01630 Brassica napus HOM05D004163 ORTHO05D004882 4.1e-07 59.3 76 52.6
BcaC06g36633 Brassica carinata HOM05D004163 ORTHO05D004882 5.3e-07 58.9 77 51.9
BolC7t40606H Brassica oleracea HOM05D004163 ORTHO05D004882 4.5e-06 55.8 63 57.1


User provided reference genes

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