Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0392 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 2.4e-162 575.5 298 100.0
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 2.4e-138 495.7 299 86.6
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 4.7e-25 119.4 277 36.5
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 1.2e-23 114.8 275 36.0
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 9.8e-23 111.7 346 31.5
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 1.9e-21 107.5 230 35.2
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 3.2e-21 106.7 239 35.6
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 5.4e-21 105.9 242 34.7
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 2.0e-20 104.0 325 30.8
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 6.0e-20 102.4 255 34.5
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 6.0e-20 102.4 260 33.8
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 1.0e-19 101.7 248 33.9
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 1.7e-19 100.9 336 31.0
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 2.3e-19 100.5 329 29.8
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 3.0e-19 100.1 329 29.8
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 8.6e-19 98.6 323 29.4
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 5.6e-18 95.9 336 29.8
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 9.5e-18 95.1 265 30.9
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 1.2e-17 94.7 219 34.7
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 1.2e-17 94.7 275 34.5
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 1.2e-17 94.7 221 34.8
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 2.8e-17 93.6 242 32.2
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 4.7e-17 92.8 237 37.1
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 6.2e-17 92.4 278 33.5
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 1.8e-16 90.9 247 34.0
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 1.8e-16 90.9 244 32.8
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 3.1e-16 90.1 255 32.9
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 3.1e-16 90.1 292 30.5
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 5.2e-16 89.4 244 32.4
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 6.8e-16 89.0 253 35.2
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 6.8e-16 89.0 251 31.5
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 1.5e-15 87.8 288 30.6
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 2.6e-15 87.0 340 30.9
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 2.6e-15 87.0 300 29.3
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 2.6e-15 87.0 263 31.9
TWI23G0841 Tripterygium wilfordii HOM05D003457 ORTHO05D009249 2.6e-15 87.0 321 29.6
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 3.4e-15 86.7 220 33.6
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 3.4e-15 86.7 240 30.8
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 3.4e-15 86.7 230 33.5
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 4.4e-15 86.3 250 32.0
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 5.8e-15 85.9 250 31.6
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 5.8e-15 85.9 241 32.8
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 7.5e-15 85.5 240 31.7
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 7.5e-15 85.5 249 32.5
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 1.7e-14 84.3 224 33.9
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 2.2e-14 84.0 299 30.8
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.9e-14 83.6 291 31.3
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.9e-14 83.6 291 31.3
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.9e-14 83.6 291 31.3
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 2.9e-14 83.6 243 32.1
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 2.9e-14 83.6 273 30.8
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 3.7e-14 83.2 263 34.2
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 4.9e-14 82.8 239 32.6
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 4.9e-14 82.8 250 31.2
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 6.4e-14 82.4 265 32.5
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 4.1e-13 79.7 251 31.1
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 4.1e-13 79.7 251 31.1
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 4.1e-13 79.7 326 29.1
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 7.1e-13 79.0 221 32.6
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 9.2e-13 78.6 254 31.1
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 2.1e-12 77.4 236 31.4
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 2.7e-12 77.0 244 31.1
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 3.5e-12 76.6 262 31.3
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 3.5e-12 76.6 233 28.3
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 4.6e-12 76.3 212 31.1
AUR62035619 Chenopodium quinoa HOM05D003457 ORTHO05D009249 7.8e-12 75.5 259 32.4
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 7.8e-12 75.5 244 30.7
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 7.8e-12 75.5 241 31.1
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 1.0e-11 75.1 264 34.1
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 1.7e-11 74.3 275 29.5
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 3.9e-11 73.2 209 33.0
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 3.9e-11 73.2 206 29.1
Cfa016162 Carpinus fangiana HOM05D003457 ORTHO05D009249 5.1e-11 72.8 321 28.3
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 6.6e-11 72.4 229 31.0
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 6.6e-11 72.4 233 28.3
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 6.6e-11 72.4 237 29.1
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 8.6e-11 72.0 205 33.2
RcHm_v2.0_Chr1g0382841 Rosa chinensis HOM05D003457 ORTHO05D009249 8.6e-11 72.0 238 26.9
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 1.5e-10 71.2 299 26.8
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 4.3e-10 69.7 235 30.6
EL10Ac3g05182 Beta vulgaris HOM05D003457 ORTHO05D009249 5.6e-10 69.3 236 30.9
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 9.5e-10 68.6 234 30.8
Lj1g0002342 Lotus japonicus HOM05D003457 ORTHO05D009249 2.8e-09 67.0 231 31.6
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 3.6e-09 66.6 237 30.4
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 4.7e-09 66.2 209 32.1
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 4.7e-09 66.2 200 30.0
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 6.2e-09 65.9 272 29.8
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 8.1e-09 65.5 205 32.7
Glyma.06G136400 Glycine max HOM05D003457 ORTHO05D009249 1.1e-08 65.1 245 28.2
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 1.4e-08 64.7 205 32.2
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 1.4e-08 64.7 224 29.9
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 1.8e-08 64.3 206 30.1
unitig_90.g27506 Utricularia gibba HOM05D003457 ORTHO05D009249 1.8e-08 64.3 158 37.3
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 5.2e-08 62.8 224 28.6
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 2.6e-07 60.5 245 28.2
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 4.4e-07 59.7 273 27.5
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 5.8e-07 59.3 198 29.3
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 9.9e-07 58.5 137 31.4
SEGI_37736 Sequoiadendron giganteum HOM05D013917 ORTHO05D013169 1.7e-06 57.8 307 27.0
Atru.chr12.2426 Acer truncatum HOM05D003457 ORTHO05D009249 2.9e-06 57.0 41 61.0
Medtr3g092670 Medicago truncatula HOM05D003457 ORTHO05D009249 2.9e-06 57.0 218 26.1
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 2.9e-06 57.0 275 27.3


User provided reference genes

Program Settings