Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 0.0e+00 1090.1 549 100.0
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 5.9e-215 751.1 527 75.9
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.5e-125 454.1 634 46.2
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 7.1e-120 435.3 633 45.7
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 9.7e-109 398.3 635 43.3
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 4.5e-106 389.4 611 44.8
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 4.2e-104 382.9 669 41.1
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 9.4e-104 381.7 631 42.9
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 1.4e-102 377.9 637 41.4
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 1.8e-99 367.5 637 42.1
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 4.1e-99 366.3 637 40.3
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 3.5e-98 363.2 623 41.7
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 5.9e-98 362.5 636 40.6
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 7.7e-98 362.1 662 40.0
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 2.9e-97 360.1 634 40.5
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.5e-96 357.8 633 41.2
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 1.5e-96 357.8 633 41.2
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.6e-95 354.4 650 40.8
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 3.9e-94 349.7 639 41.5
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 2.6e-93 347.1 687 39.3
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 5.7e-93 345.9 632 40.2
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 9.7e-93 345.1 636 39.9
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 3.7e-92 343.2 671 38.6
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.4e-91 340.5 639 39.3
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 2.0e-90 337.4 649 39.9
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 2.0e-90 337.4 654 39.1
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 2.6e-90 337.0 646 39.0
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 4.5e-90 336.3 638 39.5
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 4.5e-90 336.3 641 39.8
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 8.5e-89 332.0 659 37.8
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 1.5e-88 331.3 622 40.5
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 1.9e-88 330.9 658 38.1
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 3.2e-88 330.1 655 39.4
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 5.5e-88 329.3 665 38.9
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 9.4e-88 328.6 635 39.7
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 9.4e-88 328.6 641 39.5
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 9.4e-88 328.6 596 38.6
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 2.1e-87 327.4 636 39.6
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 2.7e-87 327.0 647 38.2
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 3.6e-87 326.6 660 38.6
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 6.1e-87 325.9 655 38.6
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 1.0e-86 325.1 662 38.4
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 1.8e-86 324.3 638 39.2
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 5.2e-86 322.8 631 38.0
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 6.8e-86 322.4 646 38.9
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 8.8e-86 322.0 656 37.5
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 1.5e-85 321.2 647 37.9
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 2.0e-85 320.9 654 39.4
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.3e-84 318.2 622 39.1
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 6.3e-84 315.8 631 39.0
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 7.0e-83 312.4 639 37.9
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 9.1e-83 312.0 629 39.0
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 7.7e-82 308.9 638 36.7
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 5.0e-81 306.2 667 36.6
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 8.5e-81 305.4 623 38.4
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 4.2e-80 303.1 617 38.6
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 1.2e-79 301.6 696 35.6
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 1.6e-79 301.2 633 36.3
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 6.1e-79 299.3 638 36.4
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 6.8e-78 295.8 636 36.8
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 8.8e-78 295.4 654 36.9
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 3.4e-77 293.5 640 38.6
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 7.5e-77 292.4 642 37.5
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 7.5e-77 292.4 634 38.8
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 7.5e-77 292.4 568 39.4
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 9.8e-77 292.0 620 39.5
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 1.7e-76 291.2 639 38.5
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 1.7e-76 291.2 643 36.7
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 3.7e-76 290.0 623 37.4
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 3.1e-75 287.0 646 37.3
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 4.1e-75 286.6 493 40.6
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 4.1e-75 286.6 632 36.9
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 9.1e-75 285.4 622 37.1
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 1.6e-74 284.6 665 35.2
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 2.0e-74 284.3 656 35.5
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 5.9e-74 282.7 661 36.9
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 5.9e-74 282.7 521 39.9
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 5.5e-72 276.2 632 35.8
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 1.2e-71 275.0 623 37.2
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 2.1e-71 274.2 645 34.9
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 3.6e-71 273.5 636 36.3
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 4.7e-71 273.1 635 36.1
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 1.0e-70 271.9 430 44.0
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 1.4e-70 271.6 587 36.3
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.3e-70 270.8 630 36.3
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 3.4e-69 266.9 666 34.2
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 5.7e-69 266.2 570 39.1
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 2.9e-68 263.8 701 33.7
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 2.9e-68 263.8 638 36.1
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 1.4e-67 261.5 596 37.4
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 1.8e-67 261.2 646 36.4
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 2.8e-63 247.3 608 36.0
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 3.6e-63 246.9 757 31.0
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 4.7e-63 246.5 596 36.4
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 1.0e-62 245.4 611 36.3
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 3.1e-62 243.8 636 34.9
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 3.4e-61 240.4 616 34.7
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 5.8e-61 239.6 595 36.3
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 1.3e-60 238.4 616 34.1
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 6.4e-60 236.1 599 35.6
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 1.4e-59 235.0 608 34.9
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 3.2e-59 233.8 604 35.3
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 4.1e-59 233.4 620 35.5
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 6.0e-58 229.6 467 37.7
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 1.7e-57 228.0 434 39.2
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.7e-57 228.0 629 34.3
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 1.1e-56 225.3 590 34.7
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 1.9e-56 224.6 607 34.6
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 2.8e-55 220.7 715 32.7
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 2.3e-54 217.6 600 33.8
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 2.6e-53 214.2 471 36.9
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 4.4e-53 213.4 440 38.0
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 3.7e-52 210.3 584 34.9
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 6.4e-52 209.5 611 34.9
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 7.1e-51 206.1 438 38.4
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 1.3e-49 201.8 451 37.3
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 1.3e-49 201.8 678 30.4
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 1.7e-49 201.4 414 36.7
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 6.6e-49 199.5 454 36.1
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 2.1e-47 194.5 583 33.3
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 2.3e-46 191.0 599 31.2
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 5.4e-43 179.9 353 39.9
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 2.1e-42 177.9 402 36.6
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 7.8e-42 176.0 152 60.5
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 8.9e-38 162.5 527 31.5
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 4.4e-37 160.2 124 65.3
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 2.9e-28 131.0 206 42.2
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 5.4e-27 126.7 688 27.2
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 1.9e-24 118.2 198 40.4
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 7.3e-24 116.3 109 59.6
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 3.6e-23 114.0 371 32.3
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 2.9e-20 104.4 111 52.3
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 5.5e-19 100.1 145 45.5
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 2.6e-13 81.3 122 41.0
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 7.6e-13 79.7 187 34.2
SEGI_29006 Sequoiadendron giganteum HOM05D005409 ORTHO05D006456 1.7e-12 78.6 248 35.1
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 1.4e-06 58.9 188 29.8


User provided reference genes

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