Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 1.8e-184 649.0 322 100.0
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 1.3e-89 334.0 303 53.8
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 5.0e-89 332.0 305 53.4
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 8.5e-89 331.3 316 52.5
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 5.5e-88 328.6 299 53.2
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 2.7e-87 326.2 291 55.3
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 8.0e-87 324.7 294 54.4
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 8.0e-87 324.7 297 52.2
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 8.0e-87 324.7 300 52.0
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 1.0e-86 324.3 323 50.2
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 1.8e-86 323.6 294 53.7
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 2.3e-86 323.2 294 54.1
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 3.0e-86 322.8 291 54.0
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.2e-85 320.9 294 54.1
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 1.5e-85 320.5 324 49.7
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 2.0e-85 320.1 318 50.9
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 3.4e-85 319.3 294 53.4
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.7e-84 317.0 304 51.6
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.7e-84 317.0 318 50.3
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 2.8e-84 316.2 317 51.1
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 4.8e-84 315.5 307 52.1
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 3.1e-83 312.8 301 51.5
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 5.4e-83 312.0 299 50.8
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 1.2e-82 310.8 341 49.0
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 1.6e-82 310.5 309 49.8
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 5.9e-82 308.5 306 50.3
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 7.7e-82 308.1 332 49.1
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 2.2e-81 306.6 301 52.5
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 2.9e-81 306.2 342 47.4
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 1.1e-80 304.3 302 51.3
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.9e-80 303.5 336 47.3
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 5.5e-80 302.0 294 50.7
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 9.4e-80 301.2 288 52.8
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 3.6e-79 299.3 298 49.0
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.3e-78 296.6 312 49.4
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 4.0e-78 295.8 312 49.4
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 4.0e-78 295.8 317 48.6
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 8.8e-78 294.7 299 48.8
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.2e-77 294.3 309 48.9
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 2.0e-77 293.5 260 53.8
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 2.0e-77 293.5 303 50.2
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 7.5e-77 291.6 338 45.3
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 1.7e-76 290.4 291 49.5
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 2.8e-76 289.7 293 48.1
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 8.3e-76 288.1 294 50.3
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 4.1e-75 285.8 315 48.6
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 5.4e-75 285.4 312 48.1
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 7.0e-75 285.0 232 56.5
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 7.0e-75 285.0 319 47.6
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 9.2e-75 284.6 305 48.5
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 1.2e-74 284.3 283 47.7
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 4.5e-74 282.3 285 49.8
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 7.7e-74 281.6 285 49.8
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 3.8e-73 279.3 283 48.4
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 3.8e-73 279.3 310 46.8
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 1.1e-72 277.7 289 48.1
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 1.9e-72 276.9 289 48.4
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 2.5e-72 276.6 290 49.3
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 2.5e-72 276.6 312 47.1
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 2.5e-72 276.6 279 49.8
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 5.6e-72 275.4 291 48.8
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 1.2e-71 274.2 299 46.8
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 1.6e-71 273.9 328 44.8
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 3.6e-71 272.7 284 48.6
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 3.6e-71 272.7 291 49.5
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 4.7e-71 272.3 294 48.0
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 6.1e-71 271.9 296 47.6
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 2.3e-70 270.0 293 49.5
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 2.3e-70 270.0 293 49.5
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 3.0e-70 269.6 263 50.6
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 5.2e-70 268.9 284 48.9
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 5.2e-70 268.9 321 43.6
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 2.0e-69 266.9 266 49.2
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 3.4e-69 266.2 301 47.2
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 4.4e-69 265.8 302 48.0
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 4.4e-69 265.8 233 54.5
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 9.8e-69 264.6 277 48.0
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 1.7e-68 263.8 300 45.3
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 1.7e-68 263.8 292 46.9
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 1.7e-68 263.8 273 49.5
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 3.7e-68 262.7 285 45.6
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 3.2e-67 259.6 247 51.0
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 4.1e-67 259.2 318 45.3
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 5.4e-67 258.8 284 46.8
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 9.2e-67 258.1 307 46.6
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 1.6e-66 257.3 262 48.9
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.5e-66 256.1 307 46.3
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 1.7e-65 253.8 310 43.9
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 1.5e-64 250.8 207 56.5
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 4.7e-63 245.7 310 45.8
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 1.8e-62 243.8 325 42.5
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 2.3e-62 243.4 264 48.5
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 1.1e-54 218.0 287 41.5
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 6.8e-54 215.3 273 44.0
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 2.0e-53 213.8 288 42.0
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 2.7e-50 203.4 208 47.6
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 6.0e-42 175.6 297 40.7
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 7.6e-37 158.7 140 53.6
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 3.4e-29 133.3 138 49.3
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 4.5e-29 132.9 138 49.3
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 1.6e-26 124.4 236 33.1
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 3.9e-25 119.8 155 44.5
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 2.5e-24 117.1 123 46.3
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 2.4e-22 110.5 86 55.8
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 6.9e-22 109.0 86 54.7
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 1.7e-20 104.4 86 52.3
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 1.9e-19 100.9 114 42.1
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 1.2e-18 98.2 138 37.7
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 3.5e-18 96.7 260 28.8
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 2.1e-10 70.9 70 47.1
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 3.9e-09 66.6 96 41.7
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 7.4e-08 62.4 66 48.5
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 7.4e-08 62.4 124 28.2
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 9.6e-08 62.0 55 45.5


User provided reference genes

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