Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0214 Ceratophyllum demersum HOM05D003816 ORTHO05D004410 9.9e-39 162.9 79 100.0
Aqoxy7G02903 Aquilegia oxysepala HOM05D003816 ORTHO05D004410 1.1e-29 132.9 70 88.6
TAR629G2639 Trochodendron aralioides HOM05D003816 ORTHO05D004410 1.4e-29 132.5 70 87.1
Nn1g04065 Nelumbo nucifera HOM05D003816 ORTHO05D004410 3.2e-29 131.3 70 90.0
TAR375G0902 Trochodendron aralioides HOM05D003816 ORTHO05D004410 3.2e-29 131.3 70 84.3
PSO135G0392 Papaver somniferum HOM05D003816 ORTHO05D004410 7.1e-29 130.2 70 85.7
PSO384G0096 Papaver somniferum HOM05D003816 ORTHO05D004410 7.1e-29 130.2 70 85.7
Hund14255 Selenicereus undatus HOM05D003816 ORTHO05D004410 1.2e-28 129.4 70 84.3
HPP92_003943 Vanilla planifolia HOM05D003816 ORTHO05D004410 1.2e-28 129.4 70 84.3
Eucgr.A02683 Eucalyptus grandis HOM05D003816 ORTHO05D004410 2.1e-28 128.6 70 82.9
MBI06_g33549_MAGBIO Magnolia biondii HOM05D003816 ORTHO05D004410 2.1e-28 128.6 70 85.7
Cfa016328 Carpinus fangiana HOM05D003816 ORTHO05D004410 4.6e-28 127.5 70 84.3
Dinv35291 Davidia involucrata HOM05D000662 ORTHO05D004410 7.8e-28 126.7 70 82.9
GSVIVG01019444001 Vitis vinifera HOM05D003816 ORTHO05D004410 7.8e-28 126.7 71 80.3
AUR62010771 Chenopodium quinoa HOM05D003816 ORTHO05D004410 1.7e-27 125.6 70 81.4
AUR62019773 Chenopodium quinoa HOM05D003816 ORTHO05D004410 1.7e-27 125.6 70 81.4
PGR042G2117 Punica granatum HOM05D003816 ORTHO05D004410 2.3e-27 125.2 70 80.0
Ciclev10020944m.g Citrus clementina HOM05D003816 ORTHO05D004410 3.0e-27 124.8 70 78.6
Cfa012263 Carpinus fangiana HOM05D000154 ORTHO05D004410 3.9e-27 124.4 70 77.1
Sc07g0009900 Simmondsia chinensis HOM05D003816 ORTHO05D004410 3.9e-27 124.4 70 78.6
HanXRQChr14g0462661 Helianthus annuus HOM05D003816 ORTHO05D004410 5.1e-27 124.0 70 81.4
Phvul.007G077200 Phaseolus vulgaris HOM05D003816 ORTHO05D004410 5.1e-27 124.0 70 81.4
Potri.001G097500 Populus trichocarpa HOM05D003816 ORTHO05D004410 5.1e-27 124.0 70 77.1
Actinidia22704 Actinidia chinensis HOM05D000059 ORTHO05D004410 6.6e-27 123.6 70 77.1
COL.COLO4_08337 Corchorus olitorius HOM05D000059 ORTHO05D004410 6.6e-27 123.6 70 77.1
Duzib068G1263 Durio zibethinus HOM05D003816 ORTHO05D004410 6.6e-27 123.6 70 77.1
Manes.01G051000 Manihot esculenta HOM05D003816 ORTHO05D004410 6.6e-27 123.6 70 77.1
Thecc.03G288800 Theobroma cacao HOM05D003816 ORTHO05D004410 6.6e-27 123.6 70 77.1
Ca_10703_v3 Cicer arietinum L. HOM05D003816 ORTHO05D004410 8.7e-27 123.2 70 81.4
vmacro06596 Vaccinium macrocarpon HOM05D003816 ORTHO05D004410 8.7e-27 123.2 70 80.0
VMungo0720G2481 Vigna mungo HOM05D003816 ORTHO05D004410 8.7e-27 123.2 70 81.4
Haze_08729 Corylus avellana HOM05D003816 ORTHO05D004410 1.1e-26 122.9 70 75.7
Sabra01G0073000 Salix brachista HOM05D000147 ORTHO05D002016 1.1e-26 122.9 70 75.7
Prupe.5G110300 Prunus persica HOM05D003816 ORTHO05D004410 1.5e-26 122.5 70 77.1
Actinidia34174 Actinidia chinensis HOM05D003816 ORTHO05D004410 1.9e-26 122.1 70 78.6
Cc02_g02150 Coffea canephora HOM05D003816 ORTHO05D004410 1.9e-26 122.1 70 80.0
Psat0s694g0040 Pisum sativum HOM05D003816 ORTHO05D004410 1.9e-26 122.1 70 80.0
QL02p032669 Quercus lobata HOM05D003816 ORTHO05D004410 1.9e-26 122.1 70 75.7
TPR.G7761 Trifolium pratense HOM05D003816 ORTHO05D004410 1.9e-26 122.1 70 80.0
CARHR274430 Cardamine hirsuta HOM05D003816 ORTHO05D004410 2.5e-26 121.7 70 74.3
Dinv28361 Davidia involucrata HOM05D003816 ORTHO05D004410 2.5e-26 121.7 70 80.0
Gohir.D08G133800 Gossypium hirsutum HOM05D003816 ORTHO05D004410 2.5e-26 121.7 70 75.7
Gorai.004G136900 Gossypium raimondii HOM05D003816 ORTHO05D004410 2.5e-26 121.7 70 75.7
Manes.02G015300 Manihot esculenta HOM05D003816 ORTHO05D004410 2.5e-26 121.7 70 75.7
Actinidia27352 Actinidia chinensis HOM05D003816 ORTHO05D004410 3.3e-26 121.3 70 75.7
Glyma.10G229000 Glycine max HOM05D003816 ORTHO05D004410 3.3e-26 121.3 70 80.0
Atru.chr1.320 Acer truncatum HOM05D003816 ORTHO05D004410 4.3e-26 120.9 70 80.0
Atru.chr9.2089 Acer truncatum HOM05D003816 ORTHO05D004410 4.3e-26 120.9 70 74.3
Glyma.05G213000 Glycine max HOM05D003816 ORTHO05D004410 4.3e-26 120.9 70 74.3
Glyma.08G019500 Glycine max HOM05D003816 ORTHO05D004410 4.3e-26 120.9 70 74.3
Gohir.A08G113000 Gossypium hirsutum HOM05D003816 ORTHO05D004410 4.3e-26 120.9 70 74.3
Gohir.A11G023400 Gossypium hirsutum HOM05D003816 ORTHO05D004410 4.3e-26 120.9 70 74.3
Gohir.D11G023100 Gossypium hirsutum HOM05D003816 ORTHO05D004410 4.3e-26 120.9 70 74.3
Gorai.007G024900 Gossypium raimondii HOM05D003816 ORTHO05D004410 4.3e-26 120.9 70 74.3
Lalb_Chr21g0305321 Lupinus albus HOM05D003816 ORTHO05D004410 4.3e-26 120.9 70 77.1
Aa31LG1G12710 Aethionema arabicum HOM05D003816 ORTHO05D004410 5.6e-26 120.6 70 72.9
BcaB05g22667 Brassica carinata HOM05D003816 ORTHO05D004410 5.6e-26 120.6 70 72.9
BcaC03g13940 Brassica carinata HOM05D003816 ORTHO05D004410 5.6e-26 120.6 70 72.9
BNapus_Darmor_BZH_scaffold_38p00150 Brassica napus HOM05D003816 ORTHO05D004410 5.6e-26 120.6 70 72.9
C02p11490 Brassica napus HOM05D003816 ORTHO05D004410 5.6e-26 120.6 70 72.9
BolC2t07223H Brassica oleracea HOM05D003816 ORTHO05D004410 5.6e-26 120.6 70 72.9
BraA02t05706Z Brassica rapa HOM05D003816 ORTHO05D004410 5.6e-26 120.6 70 72.9
Duzib205G1652 Durio zibethinus HOM05D003816 ORTHO05D004410 5.6e-26 120.6 70 75.7
Thhalv10013994m.g Eutrema salsugineum HOM05D003816 ORTHO05D004410 5.6e-26 120.6 70 72.9
Os06g0505400 Oryza sativa ssp. japonica HOM05D003816 ORTHO05D004410 5.6e-26 120.6 70 77.1
AL8G37340 Arabidopsis lyrata HOM05D003816 ORTHO05D004410 7.3e-26 120.2 70 72.9
AT5G60750 Arabidopsis thaliana HOM05D003816 ORTHO05D004410 7.3e-26 120.2 70 72.9
Carub.0008s2143 Capsella rubella HOM05D003816 ORTHO05D004410 7.3e-26 120.2 70 72.9
Glyma.20G164100 Glycine max HOM05D003816 ORTHO05D004410 7.3e-26 120.2 70 81.4
Lsat_1_v5_gn_8_6220 Lactuca sativa HOM05D003816 ORTHO05D004410 7.3e-26 120.2 70 77.1
Lalb_Chr02g0141351 Lupinus albus HOM05D003816 ORTHO05D004410 7.3e-26 120.2 70 78.6
ATR0749G058 Amborella trichopoda HOM05D003816 ORTHO05D004410 9.6e-26 119.8 70 77.1
Potri.003G133800 Populus trichocarpa HOM05D003816 ORTHO05D004410 9.6e-26 119.8 70 74.3
FvH4_5g03580 Fragaria vesca HOM05D003816 ORTHO05D004410 1.2e-25 119.4 70 74.3
FAN04G0729 Fragaria x ananassa HOM05D003816 ORTHO05D004410 1.2e-25 119.4 70 74.3
FAN04G2543 Fragaria x ananassa HOM05D003816 ORTHO05D004410 1.2e-25 119.4 70 74.3
FAN13G2496 Fragaria x ananassa HOM05D003816 ORTHO05D004410 1.2e-25 119.4 70 74.3
RcHm_v2.0_Chr7g0196131 Rosa chinensis HOM05D003816 ORTHO05D004410 1.2e-25 119.4 70 74.3
FAN08G3004 Fragaria x ananassa HOM05D003816 ORTHO05D004410 2.1e-25 118.6 70 72.9
Lj5g0016706 Lotus japonicus HOM05D003816 ORTHO05D004410 2.1e-25 118.6 70 78.6
Oeu008845.1 Olea europaea HOM05D003816 ORTHO05D004410 2.1e-25 118.6 70 77.1
Phvul.002G294300 Phaseolus vulgaris HOM05D003816 ORTHO05D004410 2.1e-25 118.6 70 72.9
TWI15G0065 Tripterygium wilfordii HOM05D003816 ORTHO05D004410 2.1e-25 118.6 70 74.3
vmacro13989 Vaccinium macrocarpon HOM05D003816 ORTHO05D004410 2.1e-25 118.6 70 74.3
VMungo0251G3347 Vigna mungo HOM05D003816 ORTHO05D004410 2.1e-25 118.6 70 72.9
Ca_10960_v3 Cicer arietinum L. HOM05D003816 ORTHO05D004410 2.8e-25 118.2 70 72.9
Ca_29631_v3 Cicer arietinum L. HOM05D003816 ORTHO05D004410 2.8e-25 118.2 70 72.9
Sp6g22330 Schrenkiella parvula HOM05D003816 ORTHO05D004410 2.8e-25 118.2 70 71.4
CiPaw.12G087600 Carya illinoinensis HOM05D003816 ORTHO05D004410 3.6e-25 117.9 70 71.4
Lj4g0017897 Lotus japonicus HOM05D003816 ORTHO05D004410 3.6e-25 117.9 70 71.4
Rhsim07G0086200 Rhododendron simsii HOM05D000059 ORTHO05D000128 3.6e-25 117.9 70 75.7
Zm00001eb032160 Zea mays HOM05D003816 ORTHO05D004410 3.6e-25 117.9 70 74.3
Cpa.g.sc122.12 Carica papaya HOM05D003816 ORTHO05D004410 4.7e-25 117.5 70 72.9
Gohir.A02G104000 Gossypium hirsutum HOM05D003816 ORTHO05D004410 4.7e-25 117.5 70 71.4
Medtr8g099085 Medicago truncatula HOM05D003816 ORTHO05D004410 4.7e-25 117.5 70 71.4
THA.LOC104809356 Tarenaya hassleriana HOM05D003816 ORTHO05D004410 4.7e-25 117.5 70 72.9
arahy.Tifrunner.gnm1.ann1.8C5G5Z Arachis hypogaea HOM05D003816 ORTHO05D004410 6.2e-25 117.1 70 72.9
Sabra03G0096100 Salix brachista HOM05D003816 ORTHO05D004410 6.2e-25 117.1 70 72.9
TPR.G3391 Trifolium pratense HOM05D003816 ORTHO05D004410 6.2e-25 117.1 70 71.4
Medtr1g099420 Medicago truncatula HOM05D003816 ORTHO05D004410 8.1e-25 116.7 70 75.7
Ah.12g052090 Amaranthus hybridus HOM05D003816 ORTHO05D004410 1.1e-24 116.3 68 79.4
CiPaw.11G127500 Carya illinoinensis HOM05D003816 ORTHO05D004410 1.1e-24 116.3 70 70.0
Gohir.D03G079700 Gossypium hirsutum HOM05D003816 ORTHO05D004410 1.1e-24 116.3 70 70.0
Oeu063040.1 Olea europaea HOM05D003816 ORTHO05D004410 1.1e-24 116.3 70 75.7
Haze_00080 Corylus avellana HOM05D003816 ORTHO05D004410 1.4e-24 115.9 90 65.6
Dinv07571 Davidia involucrata HOM05D003816 ORTHO05D004410 1.4e-24 115.9 70 75.7
Migut.A00701 Erythranthe guttata HOM05D003816 ORTHO05D004410 1.4e-24 115.9 70 75.7
PGR031G1220 Punica granatum HOM05D003816 ORTHO05D004410 1.4e-24 115.9 73 69.9
SGA_v2.0_scaffold173G39120 Striga asiatica HOM05D003816 ORTHO05D004410 1.4e-24 115.9 70 72.9
Actinidia08605 Actinidia chinensis HOM05D003816 ORTHO05D004410 1.8e-24 115.5 70 75.7
Eucgr.D01795 Eucalyptus grandis HOM05D003816 ORTHO05D004410 1.8e-24 115.5 70 68.6
Lsat_1_v5_gn_2_133601 Lactuca sativa HOM05D003816 ORTHO05D004410 1.8e-24 115.5 70 71.4
Rhsim03G0196400 Rhododendron simsii HOM05D003816 ORTHO05D004410 1.8e-24 115.5 85 68.2
CSS0012674 Camellia sinensis var. sinensis HOM05D003816 ORTHO05D004410 2.4e-24 115.2 70 78.6
CSS0031532 Camellia sinensis var. sinensis HOM05D003816 ORTHO05D004410 2.4e-24 115.2 70 78.6
CDE12G0008 Ceratophyllum demersum HOM05D003816 ORTHO05D004410 2.4e-24 115.2 61 90.2
Sed0004130 Sechium edule HOM05D003816 ORTHO05D004410 2.4e-24 115.2 70 70.0
arahy.Tifrunner.gnm1.ann1.E6YVBJ Arachis hypogaea HOM05D003816 ORTHO05D004410 3.1e-24 114.8 70 71.4
ClCG01G000780 Citrullus lanatus HOM05D003816 ORTHO05D004410 3.1e-24 114.8 70 70.0
MELO3C005852.2 Cucumis melo HOM05D003816 ORTHO05D004410 3.1e-24 114.8 70 70.0
CsaV3_5G000910 Cucumis sativus L. HOM05D003816 ORTHO05D004410 3.1e-24 114.8 70 70.0
Nn1g01737 Nelumbo nucifera HOM05D003816 ORTHO05D004410 3.1e-24 114.8 63 82.5
Sed0000969 Sechium edule HOM05D003816 ORTHO05D004410 3.1e-24 114.8 70 70.0
DCAR_020292 Daucus carota HOM05D003816 ORTHO05D004410 4.0e-24 114.4 70 71.4
Gorai.003G084200 Gossypium raimondii HOM05D003816 ORTHO05D004410 4.0e-24 114.4 70 68.6
unitig_0.g2849 Utricularia gibba HOM05D003816 ORTHO05D004410 4.0e-24 114.4 70 74.3
MSTRG.11945 Avicennia marina HOM05D003816 ORTHO05D004410 5.2e-24 114.0 70 72.9
Lalb_Chr09g0332761 Lupinus albus HOM05D003816 ORTHO05D004410 5.2e-24 114.0 70 68.6
PGSC0003DMG401012173 Solanum tuberosum HOM05D003816 ORTHO05D004410 5.2e-24 114.0 70 72.9
CAN.G532.69 Capsicum annuum HOM05D003816 ORTHO05D004410 6.9e-24 113.6 70 72.9
Nitab4.5_0000966g0010 Nicotiana tabacum HOM05D003816 ORTHO05D004410 6.9e-24 113.6 70 72.9
Solyc08g081750.3 Solanum lycopersicum HOM05D003816 ORTHO05D004410 6.9e-24 113.6 70 72.9
Sopen08g030050 Solanum pennellii HOM05D003816 ORTHO05D004410 6.9e-24 113.6 70 72.9
Peaxi162Scf00074g01527 Petunia axillaris HOM05D003816 ORTHO05D004410 1.5e-23 112.5 70 71.4
QL09p012028 Quercus lobata HOM05D003816 ORTHO05D004410 1.5e-23 112.5 61 86.9
HanXRQChr05g0144401 Helianthus annuus HOM05D003816 ORTHO05D004410 2.0e-23 112.1 70 71.4
Lj2P175T52 Lonicera japonica HOM05D003816 ORTHO05D004410 2.0e-23 112.1 70 70.0
Cc08_g15460 Coffea canephora HOM05D003816 ORTHO05D004410 3.4e-23 111.3 70 72.9
MD14G1115700 Malus domestica HOM05D003816 ORTHO05D004410 3.4e-23 111.3 70 71.4
Manes.01G051301 Manihot esculenta HOM05D003816 ORTHO05D004410 3.4e-23 111.3 64 75.0
Psat7g029000 Pisum sativum HOM05D003816 ORTHO05D004410 3.4e-23 111.3 66 72.7
Lalb_Chr05g0224371 Lupinus albus HOM05D003816 ORTHO05D004410 4.4e-23 110.9 70 68.6
GSVIVG01028788001 Vitis vinifera HOM05D003816 ORTHO05D004410 4.4e-23 110.9 70 71.4
CSS0016588 Camellia sinensis var. sinensis HOM05D003816 ORTHO05D004410 5.8e-23 110.5 64 81.2
Lj3P915T21 Lonicera japonica HOM05D003816 ORTHO05D004410 5.8e-23 110.5 61 82.0
Dinv37574 Davidia involucrata HOM05D003816 ORTHO05D004410 7.6e-23 110.2 65 78.5
ECA233G6188 Erigeron canadensis HOM05D003816 ORTHO05D004410 7.6e-23 110.2 70 71.4
unitig_88.g27629 Utricularia gibba HOM05D003816 ORTHO05D004410 9.9e-23 109.8 70 71.4
MD06G1095700 Malus domestica HOM05D003816 ORTHO05D004410 1.3e-22 109.4 70 71.4
Pp3c2_33420 Physcomitrium patens HOM05D003816 ORTHO05D004410 2.9e-22 108.2 70 65.7
EL10Ac5g12851 Beta vulgaris HOM05D003816 ORTHO05D004410 8.4e-22 106.7 70 67.1
ATR0665G060 Amborella trichopoda HOM05D003816 ORTHO05D004410 3.2e-21 104.8 64 76.6
Oeu008846.1 Olea europaea HOM05D003816 ORTHO05D004410 3.2e-21 104.8 66 74.2
SMO137G0072 Selaginella moellendorffii HOM05D003816 ORTHO05D004410 3.2e-21 104.8 70 64.3
AagrBONN_evm.TU.Sc2ySwM_228.1353 Anthoceros agrestis HOM05D003816 ORTHO05D004410 5.4e-21 104.0 70 67.1
SEGI_16728 Sequoiadendron giganteum HOM05D003816 ORTHO05D004410 9.3e-21 103.2 69 65.2
CSS0006908 Camellia sinensis var. sinensis HOM05D003816 ORTHO05D004410 2.1e-20 102.1 70 70.0
CSS0019424 Camellia sinensis var. sinensis HOM05D003816 ORTHO05D004410 2.1e-20 102.1 70 70.0
CANSAT21G2538 Cannabis sativa HOM05D003816 ORTHO05D004410 2.1e-20 102.1 70 68.6
DCAR_006850 Daucus carota HOM05D003816 ORTHO05D004410 2.1e-20 102.1 73 65.8
Mapoly0154s0029 Marchantia polymorpha HOM05D003816 ORTHO05D004410 3.5e-20 101.3 70 62.9
SEGI_22893 Sequoiadendron giganteum HOM05D003816 ORTHO05D004410 5.1e-19 97.4 69 59.4
SHI07095 Sapria himalayana HOM05D003816 ORTHO05D004410 9.6e-18 93.2 71 62.0
PRCOL_00000126 Prasinoderma coloniale HOM05D003816 ORTHO05D004410 6.4e-14 80.5 71 54.9
DCAR_008524 Daucus carota HOM05D003816 ORTHO05D004410 2.4e-13 78.6 70 52.9
Nitab4.5_0007898g0030 Nicotiana tabacum HOM05D003816 ORTHO05D004410 9.3e-13 76.6 49 71.4
MSTRG.1834 Avicennia marina HOM05D003816 ORTHO05D004410 1.3e-09 66.2 47 61.7
ATR0749G066 Amborella trichopoda HOM05D003816 ORTHO05D004410 1.1e-08 63.2 39 76.9
MCO04G312 Micromonas commoda HOM05D003816 ORTHO05D004410 3.1e-08 61.6 70 42.9
CDE01G0051 Ceratophyllum demersum HOM05D003816 ORTHO05D004410 9.0e-08 60.1 26 100.0


User provided reference genes

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