Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 3.3e-62 241.5 121 100.0
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 1.1e-33 146.7 83 84.3
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 1.1e-33 146.7 90 84.4
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 1.9e-33 146.0 82 89.0
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 2.5e-33 145.6 85 84.7
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 2.5e-33 145.6 83 85.5
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 3.3e-33 145.2 80 88.8
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 7.3e-33 144.1 82 85.4
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 9.5e-33 143.7 94 77.7
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 9.5e-33 143.7 83 85.5
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 9.5e-33 143.7 83 85.5
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 9.5e-33 143.7 83 85.5
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.2e-32 143.3 83 83.1
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 1.2e-32 143.3 82 87.8
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 1.6e-32 142.9 81 85.2
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 1.6e-32 142.9 83 85.5
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 1.6e-32 142.9 82 84.1
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 2.8e-32 142.1 82 85.4
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 3.6e-32 141.7 79 87.3
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 3.6e-32 141.7 94 76.6
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 4.7e-32 141.4 83 81.9
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 6.1e-32 141.0 83 84.3
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 8.0e-32 140.6 93 74.2
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 8.0e-32 140.6 83 83.1
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 1.4e-31 139.8 82 82.9
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 1.8e-31 139.4 82 81.7
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 1.8e-31 139.4 82 81.7
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 1.8e-31 139.4 93 74.2
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 2.3e-31 139.0 96 76.0
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 3.0e-31 138.7 82 82.9
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 3.0e-31 138.7 87 79.3
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 4.0e-31 138.3 84 82.1
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 4.0e-31 138.3 83 80.7
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 4.0e-31 138.3 88 78.4
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 5.2e-31 137.9 80 85.0
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 6.8e-31 137.5 84 79.8
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 6.8e-31 137.5 82 80.5
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 8.9e-31 137.1 85 80.0
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 8.9e-31 137.1 82 79.3
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 8.9e-31 137.1 84 83.3
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 1.5e-30 136.3 88 77.3
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 2.0e-30 136.0 78 83.3
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.0e-30 136.0 79 81.0
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 2.6e-30 135.6 82 81.7
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 2.6e-30 135.6 80 78.8
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.6e-30 135.6 80 80.0
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 2.6e-30 135.6 79 83.5
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 2.6e-30 135.6 84 82.1
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 3.4e-30 135.2 77 85.7
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.4e-30 135.2 89 75.3
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.4e-30 135.2 89 75.3
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 3.4e-30 135.2 84 81.0
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 4.4e-30 134.8 80 82.5
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 5.7e-30 134.4 83 77.1
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 5.7e-30 134.4 83 77.1
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 5.7e-30 134.4 83 77.1
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 5.7e-30 134.4 80 80.0
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 5.7e-30 134.4 80 80.0
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 7.5e-30 134.0 85 74.1
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 7.5e-30 134.0 85 74.1
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 7.5e-30 134.0 85 74.1
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 7.5e-30 134.0 84 79.8
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 9.8e-30 133.7 83 77.1
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.3e-29 133.3 83 75.9
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 1.3e-29 133.3 81 79.0
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 1.7e-29 132.9 83 73.5
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 1.7e-29 132.9 77 83.1
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 1.7e-29 132.9 80 78.8
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.2e-29 132.5 79 79.7
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 2.9e-29 132.1 91 71.4
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 3.7e-29 131.7 83 75.9
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 3.7e-29 131.7 96 69.8
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 3.7e-29 131.7 85 74.1
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 3.7e-29 131.7 87 77.0
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 3.7e-29 131.7 88 75.0
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 3.7e-29 131.7 83 75.9
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 6.4e-29 131.0 80 78.8
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 6.4e-29 131.0 84 77.4
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 8.3e-29 130.6 85 74.1
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-28 130.2 85 74.1
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-28 130.2 85 74.1
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 1.1e-28 130.2 85 74.1
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 1.1e-28 130.2 85 74.1
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 1.1e-28 130.2 85 71.8
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 1.1e-28 130.2 92 68.5
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 1.4e-28 129.8 82 74.4
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 1.4e-28 129.8 81 75.3
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 1.8e-28 129.4 89 74.2
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 3.2e-28 128.6 83 74.7
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 3.2e-28 128.6 85 72.9
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 4.1e-28 128.3 85 72.9
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 7.0e-28 127.5 85 72.9
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 9.2e-28 127.1 78 78.2
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 1.2e-27 126.7 85 74.1
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.6e-27 126.3 88 72.7
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.3e-26 123.2 74 75.7
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.3e-26 123.2 103 64.1
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 2.3e-26 122.5 101 63.4
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 3.0e-26 122.1 95 68.4
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 3.0e-26 122.1 87 66.7
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 5.0e-26 121.3 107 61.7
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 1.9e-25 119.4 69 79.7
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 2.5e-25 119.0 69 84.1
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 4.3e-25 118.2 99 62.6
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 5.6e-25 117.9 84 75.0
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 9.5e-25 117.1 66 86.4
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 2.1e-24 115.9 86 69.8
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 2.8e-24 115.5 67 86.6
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.8e-24 115.5 87 63.2
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 4.7e-24 114.8 68 80.9
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 4.7e-24 114.8 73 80.8
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 1.8e-23 112.8 70 77.1
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 2.3e-23 112.5 68 79.4
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 8.9e-23 110.5 82 67.1
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 8.9e-23 110.5 68 77.9
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 1.2e-22 110.2 64 81.2
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.7e-21 106.3 78 66.7
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 1.2e-19 100.1 81 63.0
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 4.6e-19 98.2 69 69.6
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 6.2e-16 87.8 84 60.7
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.8e-15 86.3 97 54.6
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 7.5e-14 80.9 76 52.6
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 7.5e-14 80.9 58 70.7
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 9.8e-14 80.5 46 80.4
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 9.8e-14 80.5 68 54.4
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.0e-10 70.5 71 53.5
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 1.7e-10 69.7 68 48.5
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 3.3e-09 65.5 49 61.2
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 6.2e-08 61.2 47 59.6
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 6.2e-08 61.2 47 59.6
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 6.2e-08 61.2 47 59.6


User provided reference genes

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