Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 6.3e-260 900.2 442 100.0
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.4e-235 819.3 457 90.8
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 4.4e-221 771.2 457 85.3
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 1.8e-174 616.3 456 68.0
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 2.9e-172 609.0 443 67.7
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 5.1e-169 598.2 459 66.0
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 4.3e-168 595.1 457 66.3
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 4.3e-168 595.1 456 65.1
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 5.3e-166 588.2 420 68.6
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 2.0e-165 586.3 462 63.9
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 6.5e-164 581.3 447 64.2
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 3.2e-163 578.9 446 65.0
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 9.4e-163 577.4 454 64.5
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 1.2e-162 577.0 445 63.6
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 2.7e-162 575.9 413 68.3
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 1.5e-160 570.1 457 62.4
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 9.7e-160 567.4 446 64.3
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 2.0e-157 559.7 443 62.1
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 2.6e-157 559.3 436 64.7
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 1.3e-156 557.0 457 63.0
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 1.1e-155 553.9 412 66.5
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 3.2e-155 552.4 461 61.6
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 3.2e-155 552.4 408 66.2
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 7.2e-155 551.2 452 60.8
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 1.2e-154 550.4 442 63.1
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 1.2e-154 550.4 445 60.7
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 6.1e-154 548.1 461 61.4
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 1.0e-153 547.4 457 60.2
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 2.3e-153 546.2 409 65.3
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 6.7e-153 544.7 436 63.3
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 7.4e-152 541.2 404 64.1
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 9.7e-152 540.8 417 64.5
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 3.7e-151 538.9 468 58.8
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 3.7e-151 538.9 404 64.1
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 4.8e-151 538.5 398 66.1
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 6.3e-151 538.1 442 60.4
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 1.1e-150 537.3 398 66.3
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 4.1e-150 535.4 456 59.9
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 7.0e-150 534.6 451 60.8
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.6e-149 533.5 407 64.1
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 2.0e-149 533.1 449 60.4
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 2.6e-149 532.7 449 60.4
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 7.7e-149 531.2 457 60.6
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 7.7e-149 531.2 482 56.4
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 2.9e-148 529.3 448 59.8
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 3.8e-148 528.9 393 65.6
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 6.5e-148 528.1 453 60.0
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 1.1e-147 527.3 451 58.5
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 1.1e-147 527.3 429 62.5
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 1.5e-147 526.9 444 59.7
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 1.6e-146 523.5 446 59.9
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 8.0e-146 521.2 413 62.2
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 8.0e-146 521.2 402 61.9
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 6.3e-143 511.5 449 58.8
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 3.1e-142 509.2 460 56.7
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 2.7e-141 506.1 415 59.8
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 1.3e-140 503.8 412 60.0
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 5.0e-140 501.9 410 59.3
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 7.5e-136 488.0 412 57.8
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 2.4e-134 483.0 415 56.1
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 7.0e-134 481.5 374 65.0
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.6e-133 480.3 421 57.7
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 4.2e-131 472.2 408 56.6
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 5.2e-129 465.3 425 54.4
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.4e-128 462.2 424 55.7
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 9.8e-128 461.1 415 54.0
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 2.8e-127 459.5 427 54.3
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 1.8e-113 413.7 357 58.3
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 9.9e-104 381.3 442 46.4
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 4.9e-103 379.0 400 51.0
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 1.4e-97 360.9 287 62.0
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 1.3e-90 337.8 243 66.3
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 9.9e-80 301.6 210 68.1
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 9.9e-80 301.6 241 61.0
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 1.7e-71 274.2 206 64.1
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 2.7e-69 266.9 189 68.8
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 4.1e-65 253.1 356 40.7
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 4.5e-64 249.6 289 46.7
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 6.5e-63 245.7 254 48.4
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 1.4e-49 201.4 176 54.0
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 8.0e-29 132.5 147 49.7
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 5.4e-25 119.8 78 60.3
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 1.1e-22 112.1 132 49.2
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 4.2e-22 110.2 130 40.0
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 2.6e-19 100.9 126 46.8
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 5.7e-19 99.8 96 55.2
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 1.1e-17 95.5 203 32.0
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 6.8e-12 76.3 91 51.6
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 4.9e-10 70.1 161 34.2
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 1.8e-09 68.2 79 46.8
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 2.4e-09 67.8 198 26.8
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 5.9e-08 63.2 56 50.0
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 8.6e-07 59.3 179 26.3
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 1.9e-06 58.2 92 41.3


User provided reference genes

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