Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 5.7e-128 461.1 259 100.0
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.3e-63 247.3 134 94.8
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 6.5e-63 245.0 203 68.5
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 7.1e-62 241.5 158 78.5
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 1.6e-61 240.4 184 68.5
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 1.6e-61 240.4 191 70.2
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 2.1e-61 240.0 191 69.6
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 4.6e-61 238.8 178 73.0
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 1.8e-60 236.9 241 55.6
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 6.7e-60 235.0 157 77.1
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 7.4e-59 231.5 200 64.5
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 2.2e-58 229.9 150 77.3
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 3.7e-58 229.2 183 68.9
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 4.8e-58 228.8 156 73.1
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 8.2e-58 228.0 145 77.2
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 1.1e-57 227.6 186 67.2
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 1.4e-57 227.3 183 68.3
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 4.1e-57 225.7 203 63.5
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 9.0e-57 224.6 182 67.0
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 1.2e-56 224.2 196 63.3
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 1.2e-56 224.2 225 59.6
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 1.5e-56 223.8 187 66.8
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 2.0e-56 223.4 206 62.1
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 2.6e-56 223.0 257 52.9
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 5.9e-56 221.9 150 76.7
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 5.9e-56 221.9 180 68.3
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 7.7e-56 221.5 190 64.7
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 7.7e-56 221.5 196 64.8
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 1.0e-55 221.1 190 63.7
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.0e-55 221.1 187 66.8
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 1.0e-55 221.1 220 55.5
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 1.0e-55 221.1 214 59.3
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 5.0e-55 218.8 210 60.5
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 5.0e-55 218.8 150 75.3
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 8.5e-55 218.0 150 74.0
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 8.5e-55 218.0 225 56.4
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 1.1e-54 217.6 234 54.7
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 1.9e-54 216.9 228 53.9
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 2.5e-54 216.5 166 68.7
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 4.2e-54 215.7 199 61.8
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 9.4e-54 214.5 211 59.2
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 1.2e-53 214.2 186 65.1
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 2.7e-53 213.0 181 61.3
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 2.7e-53 213.0 158 71.5
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 3.6e-53 212.6 256 53.5
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 3.6e-53 212.6 237 55.3
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 3.6e-53 212.6 178 63.5
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 3.6e-53 212.6 207 57.0
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 4.6e-53 212.2 155 69.0
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 7.9e-53 211.5 223 55.6
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 7.9e-53 211.5 215 55.3
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 1.8e-52 210.3 217 56.7
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 3.9e-52 209.1 174 64.4
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 3.9e-52 209.1 210 58.6
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 3.9e-52 209.1 251 51.0
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 5.1e-52 208.8 197 58.4
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 6.7e-52 208.4 210 59.0
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 1.1e-51 207.6 251 50.6
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 1.1e-51 207.6 210 58.1
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 2.5e-51 206.5 132 78.0
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 3.3e-51 206.1 192 62.5
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 4.3e-51 205.7 250 52.8
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 4.3e-51 205.7 250 52.8
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 5.7e-51 205.3 176 60.8
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 9.7e-51 204.5 257 51.0
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 1.7e-50 203.8 264 48.9
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.7e-50 203.8 234 54.3
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 2.2e-50 203.4 149 68.5
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 2.2e-50 203.4 240 53.8
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 8.2e-50 201.4 156 66.0
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 1.1e-49 201.1 150 68.0
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 1.1e-49 201.1 150 68.0
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 3.1e-49 199.5 151 66.9
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 9.1e-49 198.0 259 51.4
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.2e-48 197.6 176 58.5
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.2e-48 197.6 176 63.6
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 4.5e-48 195.7 203 56.2
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 5.9e-48 195.3 203 55.2
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 5.9e-48 195.3 154 69.5
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 5.9e-48 195.3 134 73.1
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 5.9e-48 195.3 285 44.9
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 1.3e-47 194.1 240 49.6
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 2.2e-47 193.4 282 45.4
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 6.5e-47 191.8 239 48.5
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.1e-46 191.0 156 68.6
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.1e-46 191.0 156 68.6
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 1.1e-46 191.0 247 50.2
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.1e-46 191.0 247 50.2
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 2.5e-46 189.9 160 63.8
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 3.2e-46 189.5 259 49.0
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 4.2e-46 189.1 180 58.9
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 5.5e-46 188.7 221 51.6
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 7.2e-46 188.3 142 69.0
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 7.2e-46 188.3 140 69.3
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 9.4e-46 188.0 226 50.0
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 1.6e-45 187.2 240 47.9
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 2.7e-45 186.4 249 49.0
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 2.7e-45 186.4 249 49.0
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 3.6e-45 186.0 163 62.0
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 3.6e-45 186.0 276 46.0
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 3.6e-45 186.0 136 70.6
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 3.6e-45 186.0 134 71.6
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 7.9e-45 184.9 254 47.2
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 1.0e-44 184.5 205 55.6
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.0e-44 184.5 165 62.4
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 2.3e-44 183.3 158 62.0
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 1.1e-43 181.0 219 52.1
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 1.5e-43 180.6 161 57.8
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 1.5e-43 180.6 219 53.4
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 1.5e-43 180.6 182 58.8
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 7.4e-43 178.3 174 56.9
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 2.8e-42 176.4 178 58.4
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 3.1e-41 172.9 153 63.4
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 9.1e-41 171.4 196 54.1
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 2.0e-40 170.2 226 44.7
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 2.6e-40 169.9 134 61.9
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 3.5e-40 169.5 178 56.7
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 2.2e-39 166.8 271 43.9
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 2.9e-39 166.4 156 58.3
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 3.2e-38 162.9 153 62.7
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 3.2e-38 162.9 132 62.9
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 9.4e-38 161.4 136 63.2
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 3.0e-36 156.4 213 46.9
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 3.3e-35 152.9 132 63.6
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 4.4e-35 152.5 199 47.7
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 5.3e-33 145.6 265 40.8
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 3.8e-31 139.4 138 57.2
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.1e-30 137.9 136 57.4
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 1.5e-30 137.5 138 52.2
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 1.6e-29 134.0 144 54.9
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 2.7e-29 133.3 132 50.0
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 3.6e-29 132.9 102 70.6
CDE02G4452 Ceratophyllum demersum HOM05D005159 ORTHO05D129729 2.3e-28 130.2 97 87.6
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 1.5e-27 127.5 164 45.1
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 3.8e-23 112.8 89 62.9
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 1.4e-20 104.4 117 47.0
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 5.2e-20 102.4 136 43.4
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 1.1e-17 94.7 135 43.0
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 5.4e-17 92.4 87 62.1
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 1.3e-15 87.8 206 34.0
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 3.3e-14 83.2 100 52.0
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 4.4e-11 72.8 57 64.9
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 2.8e-10 70.1 140 32.9
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 8.3e-10 68.6 179 29.6
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 4.1e-09 66.2 216 34.3
PRCOL_00005361 Prasinoderma coloniale HOM05D005159 ORTHO05D006237 9.5e-06 55.1 144 29.9


User provided reference genes

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