Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0122 Ceratophyllum demersum HOM05D046632 ORTHO05D130162 2.1e-261 905.2 474 100.0
CDE12G0261 Ceratophyllum demersum HOM05D046632 ORTHO05D128816 6.5e-69 265.8 172 82.0
CDE12G0534 Ceratophyllum demersum HOM05D000493 ORTHO05D008479 2.9e-37 160.6 97 82.5
MBI01_g39016_MAGBIO Magnolia biondii HOM05D000493 ORTHO05D008479 1.9e-28 131.3 488 30.9
Dinv42467 Davidia involucrata HOM05D000493 ORTHO05D008479 2.6e-17 94.4 476 26.7
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 6.4e-16 89.7 473 26.0
Prupe.4G130400 Prunus persica HOM05D000493 ORTHO05D008479 1.0e-13 82.4 494 26.9
DCAR_013717 Daucus carota HOM05D000493 ORTHO05D008479 2.5e-12 77.8 480 25.4
RcHm_v2.0_Chr5g0023901 Rosa chinensis HOM05D000493 ORTHO05D008479 4.3e-12 77.0 479 25.3
MD10G1212300 Malus domestica HOM05D000493 ORTHO05D008479 2.1e-11 74.7 467 25.3
Nn7g38312 Nelumbo nucifera HOM05D000493 ORTHO05D008479 1.1e-10 72.4 475 27.4
TPR.G9411 Trifolium pratense HOM05D000493 ORTHO05D008479 1.8e-10 71.6 482 24.3
TAR624G0207 Trochodendron aralioides HOM05D000493 ORTHO05D008479 5.2e-10 70.1 477 26.8
SalBow8G1608 Salvia bowleyana HOM05D000493 ORTHO05D008479 8.9e-10 69.3 484 26.4
Duzib268G1049 Durio zibethinus HOM05D000493 ORTHO05D008479 1.2e-09 68.9 448 26.1
SalBow8G0264 Salvia bowleyana HOM05D000493 ORTHO05D008479 1.2e-09 68.9 334 29.0
arahy.Tifrunner.gnm1.ann1.KYYE3Y Arachis hypogaea HOM05D000493 ORTHO05D008479 2.0e-09 68.2 386 24.1
Ca_23080_v3 Cicer arietinum L. HOM05D000493 ORTHO05D008479 2.0e-09 68.2 104 41.3
arahy.Tifrunner.gnm1.ann1.RK0Q3N Arachis hypogaea HOM05D000493 ORTHO05D008479 4.4e-09 67.0 359 25.1
CSS0034774 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D008479 7.5e-09 66.2 467 23.3
Cfa019383 Carpinus fangiana HOM05D000493 ORTHO05D008479 7.5e-09 66.2 250 32.0
Lj2A12T44 Lonicera japonica HOM05D000493 ORTHO05D008479 9.8e-09 65.9 74 55.4
FvH4_3g14512 Fragaria vesca HOM05D000493 ORTHO05D008479 1.3e-08 65.5 445 25.6
Lalb_Chr03g0031871 Lupinus albus HOM05D000493 ORTHO05D008479 1.3e-08 65.5 375 26.1
Ciclev10004556m.g Citrus clementina HOM05D000493 ORTHO05D008479 1.7e-08 65.1 207 31.9
Lj3g0017623 Lotus japonicus HOM05D000493 ORTHO05D008479 2.2e-08 64.7 364 28.8
FAN11G3278 Fragaria x ananassa HOM05D000493 ORTHO05D008479 2.9e-08 64.3 456 24.1
Sed0008261 Sechium edule HOM05D000493 ORTHO05D008479 2.9e-08 64.3 389 26.5
Lalb_Chr19g0133191 Lupinus albus HOM05D000493 ORTHO05D008479 4.9e-08 63.5 385 26.8
QL04p091579 Quercus lobata HOM05D000493 ORTHO05D008479 4.9e-08 63.5 412 25.2
HPP92_010214 Vanilla planifolia HOM05D000493 ORTHO05D008479 4.9e-08 63.5 70 51.4
Gohir.A08G096000 Gossypium hirsutum HOM05D000493 ORTHO05D008479 6.4e-08 63.2 453 23.6
Psat4g141640 Pisum sativum HOM05D000493 ORTHO05D008479 6.4e-08 63.2 75 46.7
Haze_07782 Corylus avellana HOM05D000493 ORTHO05D008479 8.3e-08 62.8 489 26.0
FAN25G0157 Fragaria x ananassa HOM05D000493 ORTHO05D008479 8.3e-08 62.8 455 24.4
Gohir.D08G090000 Gossypium hirsutum HOM05D000493 ORTHO05D008479 1.1e-07 62.4 444 25.2
Oeu019717.1 Olea europaea HOM05D000493 ORTHO05D008479 1.1e-07 62.4 514 24.9
CiPaw.11G058200 Carya illinoinensis HOM05D000493 ORTHO05D008479 1.4e-07 62.0 456 23.9
VMungo1127G1080 Vigna mungo HOM05D000493 ORTHO05D008479 1.4e-07 62.0 404 24.8
MD05G1264400 Malus domestica HOM05D000493 ORTHO05D008479 1.9e-07 61.6 66 51.5
QL04p092938 Quercus lobata HOM05D000493 ORTHO05D008479 1.9e-07 61.6 477 24.7
BcaC05g25582 Brassica carinata HOM05D000493 ORTHO05D008479 2.4e-07 61.2 323 26.9
Manes.16G047500 Manihot esculenta HOM05D000493 ORTHO05D008479 2.4e-07 61.2 124 37.9
AL1G28450 Arabidopsis lyrata HOM05D000493 ORTHO05D008479 3.2e-07 60.8 455 24.6
Cc05_g16520 Coffea canephora HOM05D000493 ORTHO05D008479 3.2e-07 60.8 172 33.1
Migut.M01511 Erythranthe guttata HOM05D000493 ORTHO05D008479 3.2e-07 60.8 480 21.9
FAN16G1799 Fragaria x ananassa HOM05D000493 ORTHO05D008479 3.2e-07 60.8 449 25.6
FAN21G0870 Fragaria x ananassa HOM05D000493 ORTHO05D008479 4.1e-07 60.5 454 26.0
Potri.010G173200 Populus trichocarpa HOM05D000493 ORTHO05D008479 4.1e-07 60.5 432 27.8
vmacro09767 Vaccinium macrocarpon HOM05D000493 ORTHO05D008479 4.1e-07 60.5 472 24.4
GSVIVG01036739001 Vitis vinifera HOM05D000493 ORTHO05D008479 5.4e-07 60.1 124 36.3
A06p12250 Brassica napus HOM05D000493 ORTHO05D008479 7.0e-07 59.7 304 24.3
C05p14500 Brassica napus HOM05D000493 ORTHO05D008479 7.0e-07 59.7 320 26.6
CANSAT56G1973 Cannabis sativa HOM05D000493 ORTHO05D008479 7.0e-07 59.7 76 44.7
Hma1.2p1_0334F.1_g128470 Hydrangea macrophylla HOM05D000493 ORTHO05D008479 7.0e-07 59.7 415 25.3
Gorai.004G095000 Gossypium raimondii HOM05D000493 ORTHO05D008479 9.2e-07 59.3 443 24.6
CSS0040750 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D008479 1.2e-06 58.9 464 22.4
BcaC07g38804 Brassica carinata HOM05D000493 ORTHO05D008479 1.6e-06 58.5 61 50.8
C08p17450 Brassica napus HOM05D000493 ORTHO05D008479 1.6e-06 58.5 61 50.8
BolC8t49370H Brassica oleracea HOM05D000493 ORTHO05D008479 1.6e-06 58.5 61 50.8
PSO675G4148 Papaver somniferum HOM05D000493 ORTHO05D008479 1.6e-06 58.5 243 29.6
BraA06t24393Z Brassica rapa HOM05D000493 ORTHO05D008479 2.1e-06 58.2 333 26.4
Nitab4.5_0002862g0010 Nicotiana tabacum HOM05D000493 ORTHO05D008479 2.1e-06 58.2 181 33.7
PGR042G3965 Punica granatum HOM05D000493 ORTHO05D008479 2.1e-06 58.2 449 25.8
BcaB03g13042 Brassica carinata HOM05D000493 ORTHO05D008479 4.6e-06 57.0 61 49.2
Sabra10G0132800 Salix brachista HOM05D000493 ORTHO05D008479 4.6e-06 57.0 130 35.4
Aa31LG7G850 Aethionema arabicum HOM05D000493 ORTHO05D008479 6.0e-06 56.6 80 42.5
Aqoxy1G01402 Aquilegia oxysepala HOM05D000493 ORTHO05D008479 6.0e-06 56.6 143 32.9
AT1G16330 Arabidopsis thaliana HOM05D000493 ORTHO05D008479 6.0e-06 56.6 61 49.2
BcaB02g06612 Brassica carinata HOM05D000493 ORTHO05D008479 6.0e-06 56.6 322 23.6
Actinidia00848 Actinidia chinensis HOM05D000493 ORTHO05D008479 7.8e-06 56.2 468 24.4
Thhalv10007052m.g Eutrema salsugineum HOM05D000493 ORTHO05D008479 7.8e-06 56.2 450 24.2
Nitab4.5_0000029g0220 Nicotiana tabacum HOM05D000493 ORTHO05D008479 7.8e-06 56.2 176 28.4
TWI38G0886 Tripterygium wilfordii HOM05D000493 ORTHO05D008479 7.8e-06 56.2 444 24.8


User provided reference genes

Program Settings