Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0107 Ceratophyllum demersum HOM05D007576 ORTHO05D009576 0.0e+00 1173.3 611 100.0
PSO675G5421 Papaver somniferum HOM05D007576 ORTHO05D009576 1.7e-93 347.8 658 40.4
Nn1g06600 Nelumbo nucifera HOM05D007576 ORTHO05D009576 4.9e-93 346.3 645 41.7
MBI18_g17005_MAGBIO Magnolia biondii HOM05D007576 ORTHO05D009576 5.9e-91 339.3 678 38.1
Potri.011G050600 Populus trichocarpa HOM05D007576 ORTHO05D009576 7.8e-91 339.0 631 41.0
Aqoxy1G02531 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 5.0e-90 336.3 634 38.5
Aqoxy1G02534 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 5.0e-90 336.3 634 38.5
PSO541G6317 Papaver somniferum HOM05D007576 ORTHO05D009576 1.5e-89 334.7 315 58.7
Sabra11G0034500 Salix brachista HOM05D007576 ORTHO05D009576 2.5e-89 334.0 628 40.6
Cfa000420 Carpinus fangiana HOM05D007576 ORTHO05D009576 7.3e-89 332.4 531 42.7
Manes.17G043700 Manihot esculenta HOM05D007576 ORTHO05D009576 1.6e-88 331.3 620 38.5
QL05p039732 Quercus lobata HOM05D007576 ORTHO05D009576 1.4e-87 328.2 529 42.2
FAN25G3788 Fragaria x ananassa HOM05D007576 ORTHO05D009576 2.0e-86 324.3 488 44.5
Dinv07540 Davidia involucrata HOM05D007576 ORTHO05D009576 7.5e-86 322.4 628 38.4
CiPaw.09G057800 Carya illinoinensis HOM05D007576 ORTHO05D009576 9.8e-86 322.0 608 36.5
RcHm_v2.0_Chr5g0008071 Rosa chinensis HOM05D007576 ORTHO05D009576 2.9e-85 320.5 626 38.5
AUR62014798 Chenopodium quinoa HOM05D007576 ORTHO05D009576 3.7e-85 320.1 614 37.5
FAN16G1901 Fragaria x ananassa HOM05D007576 ORTHO05D009576 3.7e-85 320.1 478 44.6
FvH4_3g04910 Fragaria vesca HOM05D007576 ORTHO05D009576 6.4e-85 319.3 470 45.5
arahy.Tifrunner.gnm1.ann1.TJT9YV Arachis hypogaea HOM05D007576 ORTHO05D009576 8.3e-85 318.9 622 38.6
FAN11G2000 Fragaria x ananassa HOM05D007576 ORTHO05D009576 1.4e-84 318.2 479 44.9
arahy.Tifrunner.gnm1.ann1.TJX0PA Arachis hypogaea HOM05D007576 ORTHO05D009576 4.1e-84 316.6 625 37.6
Glyma.05G009500 Glycine max HOM05D007576 ORTHO05D009576 7.0e-84 315.8 623 37.2
Lalb_Chr13g0302021 Lupinus albus HOM05D007576 ORTHO05D009576 7.0e-84 315.8 580 37.8
Duzib192G1068 Durio zibethinus HOM05D007576 ORTHO05D009576 1.2e-83 315.1 621 38.2
VMungo1215G0476 Vigna mungo HOM05D007576 ORTHO05D009576 1.2e-83 315.1 620 37.1
GSVIVG01002036001 Vitis vinifera HOM05D007576 ORTHO05D009576 1.2e-83 315.1 263 62.7
Cpa.g.sc1598.2 Carica papaya HOM05D007576 ORTHO05D009576 1.6e-83 314.7 617 36.1
FAN21G0504 Fragaria x ananassa HOM05D007576 ORTHO05D009576 1.6e-83 314.7 476 44.5
Glyma.17G117500 Glycine max HOM05D007576 ORTHO05D009576 2.7e-83 313.9 513 42.1
Phvul.003G161900 Phaseolus vulgaris HOM05D007576 ORTHO05D009576 7.8e-83 312.4 623 35.8
Thecc.06G190300 Theobroma cacao HOM05D007576 ORTHO05D009576 1.0e-82 312.0 622 36.8
MD05G1314800 Malus domestica HOM05D007576 ORTHO05D009576 2.3e-82 310.8 531 40.7
MSTRG.15916 Avicennia marina HOM05D007576 ORTHO05D009576 3.0e-82 310.5 629 37.0
Ciclev10014397m.g Citrus clementina HOM05D007576 ORTHO05D009576 3.0e-82 310.5 522 40.6
Zm00001eb229030 Zea mays HOM05D007576 ORTHO05D009576 3.0e-82 310.5 268 60.1
TWI38G1553 Tripterygium wilfordii HOM05D007576 ORTHO05D009576 3.9e-82 310.1 608 38.0
CANSAT35G0220 Cannabis sativa HOM05D007576 ORTHO05D009576 1.1e-81 308.5 533 40.2
RhsimUnG0044800 Rhododendron simsii HOM05D007576 ORTHO05D009576 1.9e-81 307.8 615 37.6
CSS0005805 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 2.5e-81 307.4 624 36.5
AUR62016989 Chenopodium quinoa HOM05D007576 ORTHO05D009576 3.3e-81 307.0 616 36.9
Lj4g0015142 Lotus japonicus HOM05D007576 ORTHO05D009576 4.3e-81 306.6 272 58.8
MD10G1296200 Malus domestica HOM05D007576 ORTHO05D009576 7.3e-81 305.8 413 47.0
ATR0680G038 Amborella trichopoda HOM05D007576 ORTHO05D009576 1.2e-80 305.1 266 60.2
Medtr4g113740 Medicago truncatula HOM05D007576 ORTHO05D009576 1.6e-80 304.7 614 37.9
Ca_21702_v3 Cicer arietinum L. HOM05D007576 ORTHO05D009576 2.1e-80 304.3 608 37.7
COL.COLO4_31497 Corchorus olitorius HOM05D007576 ORTHO05D009576 2.1e-80 304.3 631 37.9
Os06g0731700 Oryza sativa ssp. japonica HOM05D007576 ORTHO05D009576 2.1e-80 304.3 265 58.9
TPR.G10703 Trifolium pratense HOM05D007576 ORTHO05D009576 2.8e-80 303.9 324 54.3
Cc02_g13130 Coffea canephora HOM05D007576 ORTHO05D009576 4.7e-80 303.1 597 38.5
Lj1A1207T83 Lonicera japonica HOM05D007576 ORTHO05D009576 4.7e-80 303.1 587 38.3
HanXRQChr16g0518181 Helianthus annuus HOM05D007576 ORTHO05D009576 6.2e-80 302.8 262 62.6
ClCG01G022850 Citrullus lanatus HOM05D007576 ORTHO05D009576 1.1e-79 302.0 546 38.6
Gorai.010G153000 Gossypium raimondii HOM05D007576 ORTHO05D009576 1.1e-79 302.0 619 36.3
SGA_v2.0_scaffold7G03972 Striga asiatica HOM05D007576 ORTHO05D009576 1.1e-79 302.0 618 36.7
Sc05g0007790 Simmondsia chinensis HOM05D007576 ORTHO05D009576 1.4e-79 301.6 630 37.9
HPP92_014806 Vanilla planifolia HOM05D007576 ORTHO05D009576 2.3e-79 300.8 254 61.4
Prupe.4G044400 Prunus persica HOM05D007576 ORTHO05D009576 4.0e-79 300.1 621 36.1
ECA234G2395 Erigeron canadensis HOM05D007576 ORTHO05D009576 8.9e-79 298.9 277 58.8
Gohir.A06G126300 Gossypium hirsutum HOM05D007576 ORTHO05D009576 8.9e-79 298.9 619 36.3
Gohir.D06G131100 Gossypium hirsutum HOM05D007576 ORTHO05D009576 1.5e-78 298.1 619 36.3
Psat4g041840 Pisum sativum HOM05D007576 ORTHO05D009576 1.5e-78 298.1 620 36.9
Eucgr.E03347 Eucalyptus grandis HOM05D007576 ORTHO05D009576 2.0e-78 297.7 587 37.8
CsaV3_6G050020 Cucumis sativus L. HOM05D007576 ORTHO05D009576 2.6e-78 297.4 622 36.2
Lsat_1_v5_gn_4_52541 Lactuca sativa HOM05D007576 ORTHO05D009576 3.4e-78 297.0 268 59.7
DCAR_008044 Daucus carota HOM05D007576 ORTHO05D009576 5.8e-78 296.2 623 36.4
Nitab4.5_0009493g0040 Nicotiana tabacum HOM05D007576 ORTHO05D009576 5.8e-78 296.2 618 37.7
MELO3C007295.2 Cucumis melo HOM05D007576 ORTHO05D009576 1.9e-76 291.2 547 37.7
EL10Ac8g20358 Beta vulgaris HOM05D007576 ORTHO05D009576 2.4e-76 290.8 605 38.7
Migut.M01192 Erythranthe guttata HOM05D007576 ORTHO05D009576 2.4e-76 290.8 621 37.7
PGSC0003DMG400022439 Solanum tuberosum HOM05D007576 ORTHO05D009576 2.1e-75 287.7 622 37.0
SalBow8G3709 Salvia bowleyana HOM05D007576 ORTHO05D009576 2.7e-75 287.3 550 37.8
Peaxi162Scf00947g00422 Petunia axillaris HOM05D007576 ORTHO05D009576 4.6e-75 286.6 517 40.6
Nitab4.5_0001357g0010 Nicotiana tabacum HOM05D007576 ORTHO05D009576 6.0e-75 286.2 623 36.4
Ah.14g089350 Amaranthus hybridus HOM05D007576 ORTHO05D009576 7.8e-75 285.8 607 37.6
Oeu038219.1 Olea europaea HOM05D007576 ORTHO05D009576 1.3e-74 285.0 240 61.7
Sed0017500 Sechium edule HOM05D007576 ORTHO05D009576 1.2e-72 278.5 545 36.9
Hund21235 Selenicereus undatus HOM05D007576 ORTHO05D009576 2.1e-72 277.7 610 34.4
CAN.G1164.10 Capsicum annuum HOM05D007576 ORTHO05D009576 2.8e-72 277.3 519 38.7
Sopen02g023320 Solanum pennellii HOM05D007576 ORTHO05D009576 1.8e-71 274.6 625 36.2
PGR042G0577 Punica granatum HOM05D007576 ORTHO05D009576 4.9e-61 240.0 608 32.7
Ciclev10008775m.g Citrus clementina HOM05D007576 ORTHO05D009576 6.2e-56 223.0 283 49.5
Pp3c11_25570 Physcomitrium patens HOM05D007576 ORTHO05D009576 3.8e-53 213.8 255 46.7
Haze_06496 Corylus avellana HOM05D007576 ORTHO05D009576 1.6e-51 208.4 443 37.5
CSS0010553 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 1.7e-50 204.9 289 46.4
Mapoly0181s0007 Marchantia polymorpha HOM05D007576 ORTHO05D009576 5.1e-50 203.4 382 36.1
Ciclev10009735m.g Citrus clementina HOM05D007576 ORTHO05D009576 1.1e-36 159.1 156 54.5
Duzib235G0673 Durio zibethinus HOM05D007576 ORTHO05D009576 1.4e-36 158.7 158 53.8
Solyc02g078470.4 Solanum lycopersicum HOM05D007576 ORTHO05D009576 1.3e-26 125.6 98 62.2
CBR_g49326 Chara braunii HOM05D007576 ORTHO05D000002 3.9e-26 124.0 192 39.6
Atru.chr10.1919 Acer truncatum HOM05D007576 ORTHO05D009576 5.3e-23 113.6 461 29.9
SEGI_32076 Sequoiadendron giganteum HOM05D007576 ORTHO05D009576 5.1e-18 97.1 87 57.5
ECA247G2871 Erigeron canadensis HOM05D000526 ORTHO05D000956 5.7e-17 93.6 83 56.6
Lj2g0021670 Lotus japonicus HOM05D007576 ORTHO05D009576 3.7e-16 90.9 155 38.7
Cre13.g589167 Chlamydomonas reinhardtii HOM05D007576 ORTHO05D009576 5.0e-13 80.5 246 28.5
Atru.chr10.1928 Acer truncatum HOM05D007576 ORTHO05D009576 2.1e-11 75.1 142 39.4
MCO14G177 Micromonas commoda HOM05D004623 ORTHO05D005100 7.0e-07 60.1 135 31.1


User provided reference genes

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