Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0106 Ceratophyllum demersum HOM05D005562 ORTHO05D007785 1.1e-195 686.4 344 100.0
GSVIVG01031808001 Vitis vinifera HOM05D005562 ORTHO05D007785 3.5e-165 585.1 327 85.9
TAR625G0430 Trochodendron aralioides HOM05D005562 ORTHO05D007785 6.0e-165 584.3 327 85.9
ATR0225G001 Amborella trichopoda HOM05D005562 ORTHO05D007785 7.8e-165 583.9 327 84.7
MBI16_g19905_MAGBIO Magnolia biondii HOM05D005562 ORTHO05D007785 1.0e-164 583.6 327 84.7
TAR381G1284 Trochodendron aralioides HOM05D005562 ORTHO05D007785 1.0e-164 583.6 327 86.9
Nn1g04154 Nelumbo nucifera HOM05D005562 ORTHO05D007785 3.9e-164 581.6 327 85.6
Thecc.02G095000 Theobroma cacao HOM05D005562 ORTHO05D007785 2.8e-162 575.5 327 84.1
MD10G1088500 Malus domestica HOM05D005562 ORTHO05D007785 1.4e-161 573.2 327 85.0
MD00G1050500 Malus domestica HOM05D005562 ORTHO05D007785 4.0e-161 571.6 327 84.4
Eucgr.I01182 Eucalyptus grandis HOM05D005562 ORTHO05D007785 5.2e-161 571.2 327 85.3
Aqoxy5G01421 Aquilegia oxysepala HOM05D005562 ORTHO05D007785 8.9e-161 570.5 327 83.5
Duzib248G1341 Durio zibethinus HOM05D005562 ORTHO05D007785 4.4e-160 568.2 327 82.6
AUR62042921 Chenopodium quinoa HOM05D005562 ORTHO05D007785 7.6e-160 567.4 327 83.5
Haze_01878 Corylus avellana HOM05D005562 ORTHO05D007785 7.6e-160 567.4 326 82.5
Dinv23596 Davidia involucrata HOM05D005562 ORTHO05D001378 7.6e-160 567.4 327 83.8
QL11p038618 Quercus lobata HOM05D005562 ORTHO05D007785 9.9e-160 567.0 326 83.1
Ciclev10028560m.g Citrus clementina HOM05D005562 ORTHO05D007785 1.3e-159 566.6 327 83.5
Cfa005417 Carpinus fangiana HOM05D005562 ORTHO05D007785 3.7e-159 565.1 327 82.3
Gohir.A13G037500 Gossypium hirsutum HOM05D005562 ORTHO05D007785 4.9e-159 564.7 327 82.9
Gohir.D13G035800 Gossypium hirsutum HOM05D005562 ORTHO05D007785 1.9e-158 562.8 327 82.3
FvH4_2g07021 Fragaria vesca HOM05D005562 ORTHO05D007785 2.4e-158 562.4 327 83.2
EL10Ac1g01621 Beta vulgaris HOM05D005562 ORTHO05D007785 3.2e-158 562.0 327 82.0
RcHm_v2.0_Chr6g0259381 Rosa chinensis HOM05D005562 ORTHO05D007785 3.2e-158 562.0 327 83.2
Migut.B00304 Erythranthe guttata HOM05D005562 ORTHO05D007785 7.1e-158 560.8 327 82.9
CiPaw.05G055600 Carya illinoinensis HOM05D005562 ORTHO05D007785 9.2e-158 560.5 327 81.7
Atru.chr5.2830 Acer truncatum HOM05D005562 ORTHO05D007785 1.2e-157 560.1 327 83.2
FAN27G1497 Fragaria x ananassa HOM05D005562 ORTHO05D007785 1.2e-157 560.1 327 82.9
Oeu057671.1 Olea europaea HOM05D005562 ORTHO05D007785 1.6e-157 559.7 327 82.9
Lj9A361T59 Lonicera japonica HOM05D005562 ORTHO05D007785 2.1e-157 559.3 327 83.2
Prupe.8G115600 Prunus persica HOM05D005562 ORTHO05D007785 3.5e-157 558.5 327 81.3
EL10Ac3g06682 Beta vulgaris HOM05D005562 ORTHO05D007785 1.0e-156 557.0 327 81.3
CSS0049808 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D007785 1.0e-156 557.0 327 82.9
Cc07_g19550 Coffea canephora HOM05D005562 ORTHO05D007785 3.9e-156 555.1 336 80.4
HPP92_018726 Vanilla planifolia HOM05D005562 ORTHO05D007785 8.6e-156 553.9 327 82.0
THA.LOC104814570 Tarenaya hassleriana HOM05D005562 ORTHO05D007785 1.5e-155 553.1 327 80.7
Sc06g0001440 Simmondsia chinensis HOM05D005562 ORTHO05D007785 1.9e-155 552.7 314 84.1
SalBow3G1434 Salvia bowleyana HOM05D005562 ORTHO05D007785 3.3e-155 552.0 327 82.0
Gorai.013G040500 Gossypium raimondii HOM05D005562 ORTHO05D007785 4.3e-155 551.6 353 76.8
Os03g0617900 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 5.6e-155 551.2 327 82.3
MELO3C021919.2 Cucumis melo HOM05D005562 ORTHO05D007785 7.3e-155 550.8 327 82.0
Potri.004G145700 Populus trichocarpa HOM05D005562 ORTHO05D007785 2.1e-154 549.3 328 81.4
SGA_v2.0_scaffold32G13119 Striga asiatica HOM05D005562 ORTHO05D007785 2.1e-154 549.3 325 80.6
Peaxi162Scf00016g01531 Petunia axillaris HOM05D005562 ORTHO05D007785 2.8e-154 548.9 327 82.6
BcaC04g22480 Brassica carinata HOM05D005562 ORTHO05D007785 3.6e-154 548.5 327 80.1
BolC9t54784H Brassica oleracea HOM05D005562 ORTHO05D007785 3.6e-154 548.5 327 80.1
Hma1.2p1_0584F.1_g183170 Hydrangea macrophylla HOM05D005562 ORTHO05D007785 3.6e-154 548.5 336 80.1
Rhsim05G0079900 Rhododendron simsii HOM05D005562 ORTHO05D007785 1.1e-153 547.0 327 81.7
Aa31LG8G16860 Aethionema arabicum HOM05D005562 ORTHO05D007785 1.4e-153 546.6 327 81.0
CAN.G322.41 Capsicum annuum HOM05D005562 ORTHO05D007785 2.4e-153 545.8 327 82.3
CsaV3_2G014210 Cucumis sativus L. HOM05D005562 ORTHO05D007785 8.9e-153 543.9 327 80.1
unitig_26.g10242 Utricularia gibba HOM05D005562 ORTHO05D007785 8.9e-153 543.9 327 79.8
MSTRG.5375 Avicennia marina HOM05D005562 ORTHO05D007785 1.2e-152 543.5 327 81.7
BcaB07g31395 Brassica carinata HOM05D005562 ORTHO05D007785 2.6e-152 542.3 327 79.2
Sopen01g050880 Solanum pennellii HOM05D005562 ORTHO05D007785 3.4e-152 542.0 327 81.7
PGSC0003DMG402025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 3.4e-152 542.0 327 82.3
BraA09t37197Z Brassica rapa HOM05D005562 ORTHO05D007785 4.4e-152 541.6 327 79.5
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 4.4e-152 541.6 326 81.3
Solyc01g108660.4 Solanum lycopersicum HOM05D005562 ORTHO05D007785 4.4e-152 541.6 327 81.7
C09p18820 Brassica napus HOM05D005562 ORTHO05D007785 5.8e-152 541.2 327 79.2
Manes.15G144000 Manihot esculenta HOM05D005562 ORTHO05D007785 7.6e-152 540.8 328 80.8
DCAR_022068 Daucus carota HOM05D005562 ORTHO05D001378 1.7e-151 539.7 342 77.8
SalBow4G0329 Salvia bowleyana HOM05D005562 ORTHO05D007785 1.7e-151 539.7 362 74.6
Sed0010996 Sechium edule HOM05D005562 ORTHO05D007785 2.2e-151 539.3 327 81.0
A09p15570 Brassica napus HOM05D005562 ORTHO05D007785 3.8e-151 538.5 327 79.2
CANSAT25G3890 Cannabis sativa HOM05D005562 ORTHO05D007785 3.8e-151 538.5 327 78.3
Glyma.20G009400 Glycine max HOM05D005562 ORTHO05D007785 4.9e-151 538.1 327 77.7
Os10g0494200 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 1.4e-150 536.6 327 80.7
PSO170G1474 Papaver somniferum HOM05D005562 ORTHO05D007785 4.2e-150 535.0 327 80.1
Sp3g33250 Schrenkiella parvula HOM05D005562 ORTHO05D007785 5.4e-150 534.6 327 79.2
VMungo1215G0206 Vigna mungo HOM05D005562 ORTHO05D007785 5.4e-150 534.6 327 77.1
Zm00001eb051410 Zea mays HOM05D005562 ORTHO05D007785 5.4e-150 534.6 327 80.1
ClCG09G017590 Citrullus lanatus HOM05D005562 ORTHO05D007785 7.1e-150 534.3 346 76.6
Lalb_Chr17g0338301 Lupinus albus HOM05D005562 ORTHO05D007785 7.1e-150 534.3 327 77.7
AT2G19940 Arabidopsis thaliana HOM05D005562 ORTHO05D007785 9.3e-150 533.9 327 79.5
Thhalv10023506m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 1.2e-149 533.5 327 78.6
TPR.G11154 Trifolium pratense HOM05D005562 ORTHO05D007785 2.1e-149 532.7 327 76.5
Medtr1g012540 Medicago truncatula HOM05D005562 ORTHO05D007785 2.7e-149 532.3 327 76.8
Phvul.003G012000 Phaseolus vulgaris HOM05D005562 ORTHO05D007785 2.7e-149 532.3 327 77.1
TPR.G14865 Trifolium pratense HOM05D005562 ORTHO05D007785 2.7e-149 532.3 327 76.1
Nitab4.5_0003726g0070 Nicotiana tabacum HOM05D005562 ORTHO05D007785 3.5e-149 531.9 327 80.7
PSO210G1477 Papaver somniferum HOM05D005562 ORTHO05D007785 3.5e-149 531.9 327 79.5
Glyma.07G179700 Glycine max HOM05D005562 ORTHO05D007785 7.8e-149 530.8 327 76.5
Psat6g096120 Pisum sativum HOM05D005562 ORTHO05D007785 1.0e-148 530.4 327 75.8
Ah.13g074710 Amaranthus hybridus HOM05D005562 ORTHO05D007785 1.3e-148 530.0 327 80.4
Lj2g0016235 Lotus japonicus HOM05D005562 ORTHO05D007785 1.3e-148 530.0 327 75.8
PGR142G1983 Punica granatum HOM05D005562 ORTHO05D007785 1.3e-148 530.0 327 79.5
Carub.0003s3419 Capsella rubella HOM05D005562 ORTHO05D007785 1.7e-148 529.6 327 78.3
CARHR110380 Cardamine hirsuta HOM05D005562 ORTHO05D007785 1.7e-148 529.6 327 78.9
TWI79G1184 Tripterygium wilfordii HOM05D005562 ORTHO05D007785 1.5e-147 526.6 328 78.0
Ca_12473_v3 Cicer arietinum L. HOM05D005562 ORTHO05D007785 2.5e-147 525.8 327 75.8
Pp3c8_22120 Physcomitrium patens HOM05D005562 ORTHO05D007785 3.4e-144 515.4 327 77.4
Mapoly0036s0058 Marchantia polymorpha HOM05D005562 ORTHO05D007785 4.4e-144 515.0 327 75.2
Pp3c24_19140 Physcomitrium patens HOM05D005562 ORTHO05D007785 7.6e-144 514.2 327 76.8
arahy.Tifrunner.gnm1.ann1.4TQ1KW Arachis hypogaea HOM05D005562 ORTHO05D007785 1.3e-143 513.5 355 71.3
arahy.Tifrunner.gnm1.ann1.ZFI36T Arachis hypogaea HOM05D005562 ORTHO05D007785 2.9e-143 512.3 314 77.7
HanXRQChr16g0528561 Helianthus annuus HOM05D005562 ORTHO05D007785 3.8e-143 511.9 327 77.1
HanXRQChr13g0402421 Helianthus annuus HOM05D005562 ORTHO05D007785 4.9e-143 511.5 327 77.1
AL3G48260 Arabidopsis lyrata HOM05D005562 ORTHO05D007785 6.4e-143 511.1 314 79.3
AagrBONN_evm.TU.Sc2ySwM_117.3897 Anthoceros agrestis HOM05D005562 ORTHO05D007785 2.4e-142 509.2 327 73.7
BcaC04g19978 Brassica carinata HOM05D005562 ORTHO05D007785 1.2e-141 506.9 341 73.6
PGSC0003DMG401025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 1.2e-141 506.9 327 78.3
SMO116G0475 Selaginella moellendorffii HOM05D005562 ORTHO05D007785 1.6e-141 506.5 328 75.0
Lsat_1_v5_gn_9_108961 Lactuca sativa HOM05D005562 ORTHO05D007785 7.9e-141 504.2 327 75.5
FAN27G3443 Fragaria x ananassa HOM05D005562 ORTHO05D001378 6.6e-140 501.1 312 78.5
ECA240G1421 Erigeron canadensis HOM05D005562 ORTHO05D007785 9.6e-139 497.3 327 75.2
Nitab4.5_0001401g0050 Nicotiana tabacum HOM05D005562 ORTHO05D007785 1.8e-137 493.0 341 73.6
Hund01581 Selenicereus undatus HOM05D005562 ORTHO05D007785 1.2e-136 490.3 386 66.6
BolC9t57765H Brassica oleracea HOM05D005562 ORTHO05D007785 1.3e-135 486.9 363 68.3
CBR_g5649 Chara braunii HOM05D005562 ORTHO05D001468 4.9e-135 485.0 327 70.3
vmacro19466 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 1.6e-133 479.9 295 79.7
vmacro23230 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 2.7e-133 479.2 292 80.5
Thhalv10002012m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 5.1e-132 474.9 327 72.2
AUR62035865 Chenopodium quinoa HOM05D005562 ORTHO05D007785 1.1e-131 473.8 554 49.3
FAN24G3180 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.3e-130 470.3 327 72.5
PRCOL_00005741 Prasinoderma coloniale HOM05D005562 ORTHO05D007785 2.1e-122 443.0 331 66.2
Cre03.g146187 Chlamydomonas reinhardtii HOM05D005562 ORTHO05D007785 2.0e-120 436.4 328 64.9
FAN15G1080 Fragaria x ananassa HOM05D005562 ORTHO05D001378 6.5e-111 404.8 303 69.3
C09p49210 Brassica napus HOM05D005562 ORTHO05D007785 2.0e-104 383.3 267 71.2
Actinidia17846 Actinidia chinensis HOM05D005562 ORTHO05D007785 1.6e-77 293.9 194 76.8
PSO384G1669 Papaver somniferum HOM05D005562 ORTHO05D007785 4.7e-69 265.8 370 44.3
Cpa.g.sc62.58 Carica papaya HOM05D005562 ORTHO05D007785 8.3e-66 255.0 144 82.6
DCAR_021731 Daucus carota HOM05D005562 ORTHO05D007785 4.6e-56 222.6 237 53.2
Cpa.g.sc62.56 Carica papaya HOM05D005562 ORTHO05D007785 1.5e-54 217.6 181 63.5
HanXRQChr10g0318401 Helianthus annuus HOM05D005562 ORTHO05D007785 1.4e-52 211.1 142 69.0
Oeu021926.1 Olea europaea HOM05D005562 ORTHO05D007785 9.5e-46 188.3 112 81.2
Cpa.g.sc26.106 Carica papaya HOM05D005562 ORTHO05D007785 4.1e-41 172.9 112 75.9
Actinidia17880 Actinidia chinensis HOM05D005562 ORTHO05D007785 1.7e-39 167.5 112 73.2
arahy.Tifrunner.gnm1.ann1.Q8AXKZ Arachis hypogaea HOM05D005562 ORTHO05D007785 3.5e-32 143.3 81 80.2
Cfa027024 Carpinus fangiana HOM05D005562 ORTHO05D121372 1.1e-25 121.7 324 29.3
SEGI_28239 Sequoiadendron giganteum HOM05D005562 ORTHO05D007785 9.3e-25 118.6 66 77.3
Actinidia17845 Actinidia chinensis HOM05D005562 ORTHO05D030745 2.3e-23 114.0 67 77.6
A10p14750 Brassica napus HOM05D005562 ORTHO05D007785 6.0e-16 89.4 53 79.2
CSS0029422 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D111180 1.2e-11 75.1 93 47.3
Glyma.08G079000 Glycine max HOM05D005562 ORTHO05D007785 1.9e-09 67.8 43 67.4


User provided reference genes

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