Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 3.1e-110 401.7 195 100.0
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.3e-95 353.2 235 76.2
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.4e-73 280.0 217 63.6
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 2.3e-73 279.3 235 61.7
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 3.0e-73 278.9 221 61.1
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 8.8e-73 277.3 217 62.2
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 2.0e-72 276.2 217 62.2
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 2.6e-72 275.8 228 60.5
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 4.4e-72 275.0 219 59.8
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 4.4e-72 275.0 217 61.3
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 4.4e-72 275.0 236 58.9
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 5.7e-72 274.6 236 59.3
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 7.5e-72 274.2 219 61.2
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 9.8e-72 273.9 164 73.8
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.7e-71 273.1 219 60.7
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.2e-71 272.7 215 61.4
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 2.8e-71 272.3 228 58.8
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 3.7e-71 271.9 236 58.9
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 4.9e-71 271.6 218 61.0
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 4.9e-71 271.6 215 61.4
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 6.3e-71 271.2 219 60.7
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 8.3e-71 270.8 220 60.0
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 1.8e-70 269.6 229 59.0
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 1.8e-70 269.6 217 61.3
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 3.1e-70 268.9 218 59.6
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 4.1e-70 268.5 227 58.6
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 5.4e-70 268.1 231 56.7
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 5.4e-70 268.1 234 56.8
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 7.0e-70 267.7 217 59.9
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 7.0e-70 267.7 218 59.6
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.2e-69 266.9 217 59.9
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.6e-69 266.5 217 59.0
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 1.6e-69 266.5 230 56.5
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 1.6e-69 266.5 228 58.3
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 1.6e-69 266.5 217 59.4
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 2.0e-69 266.2 217 59.0
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 2.0e-69 266.2 234 56.0
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 2.7e-69 265.8 217 59.9
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 2.7e-69 265.8 234 59.0
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 4.5e-69 265.0 235 56.6
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.3e-68 263.5 215 60.5
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 1.7e-68 263.1 239 56.9
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.3e-68 262.7 233 57.5
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 2.3e-68 262.7 232 55.6
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 3.8e-68 261.9 225 56.4
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 3.8e-68 261.9 226 56.6
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 3.8e-68 261.9 216 58.8
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 5.0e-68 261.5 226 55.8
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 5.0e-68 261.5 216 58.8
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 6.6e-68 261.2 235 55.7
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 6.6e-68 261.2 234 55.6
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 8.6e-68 260.8 226 56.6
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 1.1e-67 260.4 225 55.6
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 1.1e-67 260.4 225 56.0
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 1.1e-67 260.4 225 56.0
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 1.1e-67 260.4 232 56.0
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.1e-67 260.4 232 56.5
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 1.5e-67 260.0 234 56.4
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 1.5e-67 260.0 234 56.4
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 1.9e-67 259.6 162 71.6
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 3.3e-67 258.8 225 56.4
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 3.3e-67 258.8 232 55.6
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 4.3e-67 258.5 234 54.7
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 4.3e-67 258.5 218 57.8
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 5.6e-67 258.1 226 56.6
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 5.6e-67 258.1 231 55.4
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 5.6e-67 258.1 165 69.7
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 5.6e-67 258.1 229 55.5
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 7.3e-67 257.7 229 54.6
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 1.2e-66 256.9 217 58.1
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.6e-66 256.5 220 58.6
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.6e-66 256.5 229 55.5
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 1.6e-66 256.5 217 56.2
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.1e-66 256.1 217 58.1
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 3.6e-66 255.4 178 65.7
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 3.6e-66 255.4 222 55.0
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 4.7e-66 255.0 236 54.2
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 4.7e-66 255.0 236 54.2
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 8.0e-66 254.2 234 55.1
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 8.0e-66 254.2 217 57.1
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 1.4e-65 253.4 165 70.9
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 2.3e-65 252.7 219 56.2
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 4.0e-65 251.9 218 56.9
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 5.2e-65 251.5 232 56.0
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 5.2e-65 251.5 217 56.7
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 2.0e-64 249.6 233 54.9
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 3.4e-64 248.8 212 56.1
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 4.4e-64 248.4 230 55.2
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 1.7e-63 246.5 235 52.3
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 3.7e-63 245.4 234 52.6
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 3.7e-63 245.4 201 61.7
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 6.4e-63 244.6 233 54.5
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.4e-62 243.4 239 53.1
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 1.8e-62 243.0 174 67.2
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 4.1e-62 241.9 229 55.0
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 4.1e-62 241.9 217 55.8
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 2.0e-61 239.6 145 73.1
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.0e-60 237.3 328 43.9
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 2.3e-60 236.1 228 53.1
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 8.6e-60 234.2 270 48.1
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 6.4e-55 218.0 141 72.3
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 3.2e-54 215.7 214 51.9
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 4.1e-54 215.3 162 61.1
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.6e-53 213.4 165 63.6
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 3.6e-50 202.2 164 55.5
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 2.0e-48 196.4 162 60.5
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 1.7e-47 193.4 164 57.9
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 1.0e-44 184.1 101 79.2
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 7.1e-38 161.4 160 54.4
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 2.3e-36 156.4 176 44.3
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 2.5e-35 152.9 206 40.8
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 4.4e-32 142.1 190 40.5
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 2.7e-21 106.3 128 46.1
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 4.6e-21 105.5 173 39.9
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 2.3e-20 103.2 62 72.6
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 8.4e-15 84.7 140 32.1
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 9.3e-14 81.3 114 45.6
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 9.3e-14 81.3 114 45.6
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 6.0e-13 78.6 116 38.8
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 5.1e-12 75.5 55 60.0
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 1.3e-10 70.9 54 57.4
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 2.8e-10 69.7 44 63.6
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.1e-09 67.8 97 41.2
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.2e-08 64.3 137 29.9
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 2.6e-08 63.2 102 41.2
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.9e-07 59.7 84 41.7
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.9e-07 59.7 82 42.7
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.9e-07 59.7 82 42.7
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.5e-06 56.6 31 77.4


User provided reference genes

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