Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 1.0e-181 639.8 300 100.0
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 4.6e-137 491.5 299 78.6
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 1.3e-131 473.4 273 80.2
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 3.8e-131 471.9 268 79.9
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 8.4e-131 470.7 299 75.3
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 8.4e-131 470.7 272 80.1
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 1.4e-130 469.9 302 74.2
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 5.4e-130 468.0 300 75.0
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 5.4e-130 468.0 286 75.2
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 5.4e-130 468.0 262 80.9
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 1.2e-129 466.8 302 73.2
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 4.6e-129 464.9 260 82.3
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 6.0e-129 464.5 263 80.2
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 1.0e-128 463.8 262 81.3
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 1.3e-128 463.4 297 72.7
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 1.3e-128 463.4 262 80.2
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 5.1e-128 461.5 268 79.5
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 8.7e-128 460.7 296 73.3
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 1.5e-127 459.9 266 80.5
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 1.5e-127 459.9 298 72.5
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 1.5e-127 459.9 268 78.7
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 2.5e-127 459.1 301 72.1
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 3.3e-127 458.8 265 79.2
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 3.3e-127 458.8 260 80.4
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 3.3e-127 458.8 273 76.6
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 4.3e-127 458.4 283 73.9
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 7.3e-127 457.6 296 73.0
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 1.3e-126 456.8 260 78.5
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 1.6e-126 456.4 284 74.3
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.8e-126 455.7 262 79.0
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 3.6e-126 455.3 293 73.4
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 3.6e-126 455.3 262 78.6
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.6e-126 455.3 262 78.2
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.6e-126 455.3 262 78.6
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.6e-126 455.3 262 78.6
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 4.8e-126 454.9 291 71.8
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 4.8e-126 454.9 293 73.7
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 4.8e-126 454.9 262 78.6
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 4.8e-126 454.9 262 79.0
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 4.8e-126 454.9 287 73.5
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 6.2e-126 454.5 266 78.9
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.1e-125 453.8 266 77.1
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 1.1e-125 453.8 293 72.4
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 1.4e-125 453.4 260 79.6
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 1.8e-125 453.0 287 73.2
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 3.1e-125 452.2 260 77.7
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 4.0e-125 451.8 285 74.7
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 6.9e-125 451.1 266 77.1
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 9.0e-125 450.7 268 76.9
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 2.6e-124 449.1 270 77.8
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 2.6e-124 449.1 263 77.2
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 3.4e-124 448.7 263 76.8
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 3.4e-124 448.7 260 77.3
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 4.5e-124 448.4 265 75.8
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 5.8e-124 448.0 274 76.3
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 5.8e-124 448.0 267 78.3
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 9.9e-124 447.2 265 75.1
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 1.7e-123 446.4 268 76.5
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 1.9e-122 443.0 268 75.7
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 3.2e-122 442.2 272 75.7
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 5.5e-122 441.4 268 76.1
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 1.2e-121 440.3 268 75.4
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 1.6e-121 439.9 260 76.5
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 6.0e-121 438.0 262 76.0
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 7.9e-121 437.6 243 82.7
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 7.9e-121 437.6 295 70.2
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 1.8e-120 436.4 295 68.5
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.8e-120 436.4 313 67.1
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 6.7e-120 434.5 266 75.6
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 1.9e-119 433.0 268 74.3
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 9.6e-119 430.6 271 75.3
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 3.7e-118 428.7 268 75.0
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 1.4e-117 426.8 260 74.6
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 3.1e-117 425.6 262 74.8
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 6.9e-117 424.5 262 74.4
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 2.6e-116 422.5 262 74.4
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 5.8e-116 421.4 245 76.3
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 2.9e-115 419.1 269 73.6
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 2.9e-115 419.1 258 77.5
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 6.5e-115 417.9 249 75.5
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 3.2e-114 415.6 269 72.5
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 3.2e-114 415.6 269 72.5
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 3.2e-114 415.6 269 72.5
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 5.5e-114 414.8 281 69.4
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 3.0e-112 409.1 301 65.8
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 5.0e-107 391.7 230 78.7
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 9.3e-106 387.5 284 63.7
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 1.6e-102 376.7 265 65.3
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 2.4e-101 372.9 207 79.7
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 6.9e-101 371.3 253 70.0
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 4.5e-100 368.6 258 65.5
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 4.5e-100 368.6 275 61.8
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 1.3e-99 367.1 207 79.2
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 2.7e-97 359.4 254 63.8
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 4.6e-97 358.6 229 72.5
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 6.7e-96 354.8 207 77.3
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 4.3e-95 352.1 297 59.9
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 4.8e-94 348.6 255 67.8
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 9.1e-85 317.8 255 63.5
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 1.8e-77 293.5 170 76.5
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 4.2e-74 282.3 174 74.1
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.8e-72 276.9 148 83.1
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 3.7e-70 269.2 171 71.9
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 4.5e-60 235.7 176 65.3
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 5.6e-58 228.8 301 42.5
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 7.3e-58 228.4 169 67.5
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 3.4e-55 219.5 145 71.0
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.6e-52 210.7 172 61.0
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 7.8e-52 208.4 269 43.5
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 2.3e-43 180.3 238 42.0
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 7.5e-39 165.2 135 61.5
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 2.2e-38 163.7 184 52.2
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 1.4e-37 161.0 251 39.0
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.4e-37 160.2 96 75.0
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 2.7e-36 156.8 249 36.5
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.2e-28 131.3 248 34.3
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.3e-27 127.9 157 44.6
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.6e-17 94.4 244 28.3
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 4.8e-17 92.8 72 59.7
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 2.0e-15 87.4 57 68.4
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 4.9e-14 82.8 81 53.1
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.8e-11 74.3 54 63.0
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 3.3e-10 70.1 41 75.6
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 1.6e-09 67.8 42 71.4
SEGI_18314 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.3e-06 58.2 25 96.0
MBI11_g05318_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.4e-06 55.5 30 83.3


User provided reference genes

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