Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0007 Ceratophyllum demersum HOM05D000416 ORTHO05D129531 8.8e-122 440.3 217 100.0
CDE01G0224 Ceratophyllum demersum HOM05D000416 ORTHO05D000322 4.3e-28 129.0 90 82.2
CDE12G0455 Ceratophyllum demersum HOM05D000416 ORTHO05D000322 1.5e-20 104.0 204 40.7
CDE01G0529 Ceratophyllum demersum HOM05D000416 ORTHO05D000322 5.3e-18 95.5 196 39.3
CDE01G0687 Ceratophyllum demersum HOM05D000416 ORTHO05D000322 5.3e-18 95.5 174 44.8
BcaC07g36974 Brassica carinata HOM05D000416 ORTHO05D000322 3.0e-13 79.7 144 37.5
MBI17_g29198_MAGBIO Magnolia biondii HOM05D000416 ORTHO05D000322 5.7e-12 75.5 199 31.7
THA.LOC104801233 Tarenaya hassleriana HOM05D000416 ORTHO05D000322 2.8e-11 73.2 198 32.3
MBI17_g35413_MAGBIO Magnolia biondii HOM05D000416 ORTHO05D000322 6.3e-11 72.0 199 32.2
TAR633G2078 Trochodendron aralioides HOM05D000416 ORTHO05D000322 1.1e-10 71.2 199 29.6
CDE01G0646 Ceratophyllum demersum HOM05D000416 ORTHO05D000322 1.4e-10 70.9 59 64.4
CiPaw.01G160800 Carya illinoinensis HOM05D000416 ORTHO05D000322 2.4e-10 70.1 197 30.5
MBI17_g34186_MAGBIO Magnolia biondii HOM05D000416 ORTHO05D000322 2.4e-10 70.1 181 34.3
TAR633G0534 Trochodendron aralioides HOM05D000416 ORTHO05D000322 2.4e-10 70.1 200 28.5
Aqoxy5G01318 Aquilegia oxysepala HOM05D000416 ORTHO05D000322 3.1e-10 69.7 199 30.2
QL12p022162 Quercus lobata HOM05D000416 ORTHO05D000322 3.1e-10 69.7 200 30.0
Manes.03G183800 Manihot esculenta HOM05D000416 ORTHO05D000322 5.3e-10 68.9 193 29.5
Cc03_g14010 Coffea canephora HOM05D000416 ORTHO05D000322 6.9e-10 68.6 205 30.2
THA.LOC104826001 Tarenaya hassleriana HOM05D000416 ORTHO05D000322 1.2e-09 67.8 186 31.7
Eucgr.B01135 Eucalyptus grandis HOM05D000416 ORTHO05D000322 1.5e-09 67.4 201 29.4
MBI17_g29200_MAGBIO Magnolia biondii HOM05D000416 ORTHO05D000322 1.5e-09 67.4 187 31.0
Nn1g02172 Nelumbo nucifera HOM05D000416 ORTHO05D000322 1.5e-09 67.4 185 31.9
AUR62030105 Chenopodium quinoa HOM05D000416 ORTHO05D000322 2.0e-09 67.0 192 30.2
THA.LOC104801229 Tarenaya hassleriana HOM05D000416 ORTHO05D000322 2.0e-09 67.0 173 32.9
Dinv32949 Davidia involucrata HOM05D000416 ORTHO05D000322 2.6e-09 66.6 191 29.8
Manes.05G074900 Manihot esculenta HOM05D000416 ORTHO05D000322 2.6e-09 66.6 190 27.9
Peaxi162Scf00196g00723 Petunia axillaris HOM05D000416 ORTHO05D000322 2.6e-09 66.6 203 30.0
CSS0013419 Camellia sinensis var. sinensis HOM05D000416 ORTHO05D000322 3.4e-09 66.2 173 29.5
Thhalv10007672m.g Eutrema salsugineum HOM05D000416 ORTHO05D000322 3.4e-09 66.2 188 30.3
C08p52890 Brassica napus HOM05D000416 ORTHO05D000322 5.9e-09 65.5 160 33.8
Haze_04728 Corylus avellana HOM05D000416 ORTHO05D000322 5.9e-09 65.5 199 30.7
Gohir.A12G005700 Gossypium hirsutum HOM05D000416 ORTHO05D000322 5.9e-09 65.5 200 30.0
Rhsim02G0020500 Rhododendron simsii HOM05D000416 ORTHO05D000322 5.9e-09 65.5 201 27.9
Atru.chr4.2558 Acer truncatum HOM05D000416 ORTHO05D000322 7.7e-09 65.1 200 28.5
Migut.N02160 Erythranthe guttata HOM05D000416 ORTHO05D000322 1.0e-08 64.7 200 28.5
AT1G03220 Arabidopsis thaliana HOM05D000416 ORTHO05D000322 1.3e-08 64.3 188 30.3
CSS0045581 Camellia sinensis var. sinensis HOM05D000416 ORTHO05D000322 1.3e-08 64.3 190 28.9
Ciclev10007187m.g Citrus clementina HOM05D000416 ORTHO05D000322 1.3e-08 64.3 195 28.2
Nitab4.5_0002600g0050 Nicotiana tabacum HOM05D000416 ORTHO05D000322 1.3e-08 64.3 276 28.6
Thecc.04G223400 Theobroma cacao HOM05D000416 ORTHO05D000322 1.3e-08 64.3 201 27.4
vmacro15311 Vaccinium macrocarpon HOM05D000416 ORTHO05D000322 1.3e-08 64.3 197 26.9
AL1G12730 Arabidopsis lyrata HOM05D000416 ORTHO05D000322 1.7e-08 63.9 188 30.3
Sabra02G0044500 Salix brachista HOM05D000416 ORTHO05D000322 1.7e-08 63.9 199 29.1
Aa31LG1G9320 Aethionema arabicum HOM05D000416 ORTHO05D000322 2.2e-08 63.5 188 28.7
CANSAT78G2095 Cannabis sativa HOM05D000416 ORTHO05D000322 2.2e-08 63.5 66 53.0
Ciclev10006689m.g Citrus clementina HOM05D000416 ORTHO05D000322 2.2e-08 63.5 205 28.8
COL.COLO4_09120 Corchorus olitorius HOM05D000416 ORTHO05D000322 2.2e-08 63.5 199 29.1
ATR0626G031 Amborella trichopoda HOM05D000416 ORTHO05D000322 2.9e-08 63.2 201 29.4
A08p37410 Brassica napus HOM05D000416 ORTHO05D000322 2.9e-08 63.2 195 29.2
Nitab4.5_0001067g0040 Nicotiana tabacum HOM05D000416 ORTHO05D000322 2.9e-08 63.2 190 31.6
Potri.002G054900 Populus trichocarpa HOM05D000416 ORTHO05D000322 2.9e-08 63.2 199 28.6
BolC8t46850H Brassica oleracea HOM05D000416 ORTHO05D000322 3.8e-08 62.8 195 29.2
CiPaw.07G093000 Carya illinoinensis HOM05D000416 ORTHO05D000322 3.8e-08 62.8 198 27.8
Peaxi162Scf00196g00613 Petunia axillaris HOM05D000416 ORTHO05D000322 3.8e-08 62.8 205 28.8
Atru.chr4.2554 Acer truncatum HOM05D000416 ORTHO05D000322 5.0e-08 62.4 200 29.0
Gohir.D12G005200 Gossypium hirsutum HOM05D000416 ORTHO05D000322 5.0e-08 62.4 198 28.8
Gorai.008G005100 Gossypium raimondii HOM05D000416 ORTHO05D000322 5.0e-08 62.4 198 28.8
Gorai.011G080800 Gossypium raimondii HOM05D000416 ORTHO05D000322 5.0e-08 62.4 200 28.5
Atru.chr4.2553 Acer truncatum HOM05D000416 ORTHO05D000322 6.5e-08 62.0 199 27.6
AL5G19010 Arabidopsis lyrata HOM05D000416 ORTHO05D000322 6.5e-08 62.0 180 30.6
Haze_00955 Corylus avellana HOM05D000416 ORTHO05D000322 6.5e-08 62.0 200 27.5
GSVIVG01017894001 Vitis vinifera HOM05D000416 ORTHO05D000322 6.5e-08 62.0 131 33.6
C08p00500 Brassica napus HOM05D000416 ORTHO05D000322 8.5e-08 61.6 195 29.2
Ciclev10013399m.g Citrus clementina HOM05D000416 ORTHO05D000322 8.5e-08 61.6 149 29.5
COL.COLO4_26617 Corchorus olitorius HOM05D000416 ORTHO05D000322 8.5e-08 61.6 201 27.9
DCAR_012467 Daucus carota HOM05D000416 ORTHO05D000322 8.5e-08 61.6 204 28.4
Medtr1g072420 Medicago truncatula HOM05D000416 ORTHO05D000322 8.5e-08 61.6 194 30.4
SGA_v2.0_scaffold80G25937 Striga asiatica HOM05D000416 ORTHO05D000322 8.5e-08 61.6 195 30.3
Aqoxy5G00526 Aquilegia oxysepala HOM05D000416 ORTHO05D000322 1.1e-07 61.2 66 53.0
MSTRG.17438 Avicennia marina HOM05D000416 ORTHO05D000322 1.1e-07 61.2 66 53.0
COL.COLO4_26613 Corchorus olitorius HOM05D000416 ORTHO05D000322 1.1e-07 61.2 193 26.9
Lsat_1_v5_gn_9_4161 Lactuca sativa HOM05D000416 ORTHO05D000322 1.1e-07 61.2 192 27.6
Lj5g0018480 Lotus japonicus HOM05D000416 ORTHO05D000322 1.1e-07 61.2 195 29.2
Cfa006124 Carpinus fangiana HOM05D000416 ORTHO05D000322 1.4e-07 60.8 191 27.7
Cfa006125 Carpinus fangiana HOM05D000416 ORTHO05D000322 1.4e-07 60.8 191 27.7
Cc03_g01980 Coffea canephora HOM05D000416 ORTHO05D000322 1.4e-07 60.8 67 53.7
Medtr1g072450 Medicago truncatula HOM05D000416 ORTHO05D000322 1.4e-07 60.8 194 28.9
Prupe.1G152100 Prunus persica HOM05D000416 ORTHO05D000322 1.4e-07 60.8 201 28.4
VMungo0720G0794 Vigna mungo HOM05D000416 ORTHO05D000322 1.4e-07 60.8 193 29.5
PGR044G1505 Punica granatum HOM05D000416 ORTHO05D000322 1.9e-07 60.5 68 47.1
ECA247G1851 Erigeron canadensis HOM05D000416 ORTHO05D000322 2.5e-07 60.1 199 27.1
PGSC0003DMG400008982 Solanum tuberosum HOM05D000416 ORTHO05D000322 2.5e-07 60.1 203 28.6
Aa31LG1G9310 Aethionema arabicum HOM05D000416 ORTHO05D000322 3.2e-07 59.7 185 27.6
ATR0626G103 Amborella trichopoda HOM05D000416 ORTHO05D000322 3.2e-07 59.7 202 27.7
CAN.G183.12 Capsicum annuum HOM05D000416 ORTHO05D000322 3.2e-07 59.7 197 28.4
COL.COLO4_09119 Corchorus olitorius HOM05D000416 ORTHO05D000322 3.2e-07 59.7 197 26.9
Gohir.D10G075000 Gossypium hirsutum HOM05D000416 ORTHO05D000322 3.2e-07 59.7 200 28.0
TWI14G0655 Tripterygium wilfordii HOM05D000416 ORTHO05D000322 3.2e-07 59.7 212 25.9
TAR633G0136 Trochodendron aralioides HOM05D000416 ORTHO05D000322 3.2e-07 59.7 71 47.9
Actinidia08514 Actinidia chinensis HOM05D000416 ORTHO05D000322 4.2e-07 59.3 66 48.5
Sc13g0004070 Simmondsia chinensis HOM05D000416 ORTHO05D000322 4.2e-07 59.3 199 30.2
Duzib211G0458 Durio zibethinus HOM05D000416 ORTHO05D000322 5.5e-07 58.9 195 26.7
Eucgr.K03382 Eucalyptus grandis HOM05D000416 ORTHO05D000322 5.5e-07 58.9 172 29.1
Manes.03G184000 Manihot esculenta HOM05D000416 ORTHO05D000322 5.5e-07 58.9 197 27.9
Sp1g02230 Schrenkiella parvula HOM05D000416 ORTHO05D000322 5.5e-07 58.9 190 28.4
TPR.G1554 Trifolium pratense HOM05D000416 ORTHO05D000322 5.5e-07 58.9 66 51.5
TWI73G0737 Tripterygium wilfordii HOM05D000416 ORTHO05D000322 5.5e-07 58.9 193 26.9
Potri.006G068900 Populus trichocarpa HOM05D000416 ORTHO05D000322 7.2e-07 58.5 201 28.4
Rhsim02G0020100 Rhododendron simsii HOM05D000416 ORTHO05D000322 7.2e-07 58.5 190 28.9
Rhsim02G0020300 Rhododendron simsii HOM05D000416 ORTHO05D000322 7.2e-07 58.5 194 27.8
Solyc01g079980.3 Solanum lycopersicum HOM05D000416 ORTHO05D000322 7.2e-07 58.5 208 27.4
Sopen01g031750 Solanum pennellii HOM05D000416 ORTHO05D000322 7.2e-07 58.5 209 27.3
GSVIVG01011116001 Vitis vinifera HOM05D000416 ORTHO05D000322 7.2e-07 58.5 175 29.7
Aa31LG1G9330 Aethionema arabicum HOM05D000416 ORTHO05D000322 9.4e-07 58.2 188 28.2
A09p68330 Brassica napus HOM05D000416 ORTHO05D000322 9.4e-07 58.2 188 29.3
BraA09t42169Z Brassica rapa HOM05D000416 ORTHO05D000322 9.4e-07 58.2 188 29.3
CSS0034325 Camellia sinensis var. sinensis HOM05D000416 ORTHO05D000322 9.4e-07 58.2 189 26.5
AUR62030106 Chenopodium quinoa HOM05D000416 ORTHO05D000322 9.4e-07 58.2 66 50.0
AUR62038206 Chenopodium quinoa HOM05D000416 ORTHO05D000322 9.4e-07 58.2 66 45.5
Lalb_Chr02g0142821 Lupinus albus HOM05D000416 ORTHO05D000322 9.4e-07 58.2 66 51.5
Nn1g02175 Nelumbo nucifera HOM05D000416 ORTHO05D000322 9.4e-07 58.2 66 48.5
Rhsim02G0020000 Rhododendron simsii HOM05D000416 ORTHO05D000322 9.4e-07 58.2 184 27.2
SEGI_26815 Sequoiadendron giganteum HOM05D000416 ORTHO05D000322 9.4e-07 58.2 117 33.3
PGSC0003DMG400008978 Solanum tuberosum HOM05D000416 ORTHO05D000322 9.4e-07 58.2 197 27.9
CAN.G183.1 Capsicum annuum HOM05D000416 ORTHO05D000322 1.2e-06 57.8 203 28.6
CARHR002340 Cardamine hirsuta HOM05D000416 ORTHO05D000322 1.2e-06 57.8 195 28.7
MELO3C006562.2 Cucumis melo HOM05D000416 ORTHO05D000322 1.2e-06 57.8 71 49.3
CsaV3_3G013680 Cucumis sativus L. HOM05D000416 ORTHO05D000322 1.2e-06 57.8 71 49.3
HanXRQChr10g0282821 Helianthus annuus HOM05D000416 ORTHO05D000322 1.2e-06 57.8 199 28.1
Hma1.2p1_0511F.1_g169060 Hydrangea macrophylla HOM05D000416 ORTHO05D000322 1.2e-06 57.8 194 24.7
Lj3C752T2 Lonicera japonica HOM05D000416 ORTHO05D000322 1.2e-06 57.8 184 28.3
PSO017G4777 Papaver somniferum HOM05D000416 ORTHO05D000322 1.2e-06 57.8 195 29.7
Sabra06G0051400 Salix brachista HOM05D000416 ORTHO05D000322 1.2e-06 57.8 191 26.7
HPP92_000389 Vanilla planifolia HOM05D000416 ORTHO05D000322 1.2e-06 57.8 66 53.0
Atru.chr4.2557 Acer truncatum HOM05D000416 ORTHO05D000322 1.6e-06 57.4 196 25.5
Aqoxy5G00523 Aquilegia oxysepala HOM05D000416 ORTHO05D000322 1.6e-06 57.4 198 27.8
Cfa015590 Carpinus fangiana HOM05D000416 ORTHO05D000322 1.6e-06 57.4 66 48.5
DCAR_024589 Daucus carota HOM05D000416 ORTHO05D000322 1.6e-06 57.4 161 29.8
Gohir.D08G077100 Gossypium hirsutum HOM05D000416 ORTHO05D000322 1.6e-06 57.4 195 27.7
Gorai.004G081800 Gossypium raimondii HOM05D000416 ORTHO05D000322 1.6e-06 57.4 195 27.7
AUR62030104 Chenopodium quinoa HOM05D000416 ORTHO05D000322 2.1e-06 57.0 66 47.0
FvH4_4g14670 Fragaria vesca HOM05D000416 ORTHO05D000322 2.1e-06 57.0 162 29.6
FAN12G0267 Fragaria x ananassa HOM05D000416 ORTHO05D000322 2.1e-06 57.0 162 29.6
FAN12G2670 Fragaria x ananassa HOM05D000416 ORTHO05D000322 2.1e-06 57.0 162 29.6
FAN12G3017 Fragaria x ananassa HOM05D000416 ORTHO05D000322 2.1e-06 57.0 162 29.6
MD13G1184800 Malus domestica HOM05D000416 ORTHO05D000322 2.1e-06 57.0 197 26.4
PGR044G2100 Punica granatum HOM05D000416 ORTHO05D000322 2.1e-06 57.0 198 27.8
SHI06403 Sapria himalayana HOM05D000416 ORTHO05D000322 2.1e-06 57.0 175 30.3
AT1G03230 Arabidopsis thaliana HOM05D000416 ORTHO05D000322 2.7e-06 56.6 187 28.3
arahy.Tifrunner.gnm1.ann1.2Z58NA Arachis hypogaea HOM05D000416 ORTHO05D000322 2.7e-06 56.6 66 50.0
CSS0018940 Camellia sinensis var. sinensis HOM05D000416 ORTHO05D000322 2.7e-06 56.6 199 28.1
DCAR_027161 Daucus carota HOM05D000416 ORTHO05D000322 2.7e-06 56.6 164 27.4
Phvul.007G170900 Phaseolus vulgaris HOM05D000416 ORTHO05D000322 2.7e-06 56.6 193 29.5
AUR62038203 Chenopodium quinoa HOM05D000416 ORTHO05D000322 3.6e-06 56.2 66 48.5
Psat6g125800 Pisum sativum HOM05D000416 ORTHO05D000322 3.6e-06 56.2 201 27.4
Sed0017602 Sechium edule HOM05D000416 ORTHO05D000322 3.6e-06 56.2 158 29.7
Solyc01g080010.2 Solanum lycopersicum HOM05D000416 ORTHO05D000322 3.6e-06 56.2 191 27.2
Cpa.g.sc52.15 Carica papaya HOM05D000416 ORTHO05D000322 4.7e-06 55.8 186 27.4
DCAR_002410 Daucus carota HOM05D000416 ORTHO05D000322 4.7e-06 55.8 194 26.8
Eucgr.K03381 Eucalyptus grandis HOM05D000416 ORTHO05D000322 4.7e-06 55.8 199 27.1
FAN15G3461 Fragaria x ananassa HOM05D000416 ORTHO05D000322 4.7e-06 55.8 201 25.9
Glyma.02G148200 Glycine max HOM05D000416 ORTHO05D000322 4.7e-06 55.8 189 29.1
Lj3C715T9 Lonicera japonica HOM05D000416 ORTHO05D000322 4.7e-06 55.8 184 27.7
Nn4g26200 Nelumbo nucifera HOM05D000416 ORTHO05D000322 4.7e-06 55.8 275 24.0
Nitab4.5_0000267g0110 Nicotiana tabacum HOM05D000416 ORTHO05D000322 4.7e-06 55.8 198 29.3
Oeu029588.1 Olea europaea HOM05D000416 ORTHO05D000322 4.7e-06 55.8 66 48.5
CANSAT78G1283 Cannabis sativa HOM05D000416 ORTHO05D000322 6.1e-06 55.5 66 39.4
Ciclev10005038m.g Citrus clementina HOM05D000416 ORTHO05D000322 6.1e-06 55.5 61 42.6
Lj3P715T49 Lonicera japonica HOM05D000416 ORTHO05D000322 6.1e-06 55.5 202 27.2
Lj3P751T37 Lonicera japonica HOM05D000416 ORTHO05D000322 6.1e-06 55.5 202 27.2
Nitab4.5_0006094g0010 Nicotiana tabacum HOM05D000416 ORTHO05D000322 6.1e-06 55.5 198 28.3
Nitab4.5_0009401g0020 Nicotiana tabacum HOM05D000416 ORTHO05D000322 6.1e-06 55.5 204 27.0
TAR362G0784 Trochodendron aralioides HOM05D000416 ORTHO05D000322 6.1e-06 55.5 171 29.8
BcaC07g36977 Brassica carinata HOM05D000416 ORTHO05D000322 7.9e-06 55.1 190 27.4
ClCG05G005400 Citrullus lanatus HOM05D000416 ORTHO05D000322 7.9e-06 55.1 222 27.0
Dinv23966 Davidia involucrata HOM05D000416 ORTHO05D000322 7.9e-06 55.1 152 28.3
FvH4_2g23780 Fragaria vesca HOM05D000416 ORTHO05D000322 7.9e-06 55.1 201 25.9
FAN24G0061 Fragaria x ananassa HOM05D000416 ORTHO05D000322 7.9e-06 55.1 201 25.9
MD11G1287900 Malus domestica HOM05D000416 ORTHO05D000322 7.9e-06 55.1 201 26.4
PSO170G6611 Papaver somniferum HOM05D000416 ORTHO05D000322 7.9e-06 55.1 195 28.7


User provided reference genes

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