Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 1.3e-234 816.2 471 100.0
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 1.3e-45 188.3 318 34.0
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 2.2e-45 187.6 330 34.5
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 3.6e-43 180.3 328 35.7
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 2.3e-42 177.6 324 32.1
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 3.0e-42 177.2 321 35.5
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 2.0e-41 174.5 318 33.3
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 7.4e-41 172.6 322 33.5
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 9.7e-41 172.2 317 33.1
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 9.7e-41 172.2 315 32.4
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 1.3e-40 171.8 321 31.8
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 1.7e-40 171.4 315 32.4
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 1.7e-40 171.4 315 32.1
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 1.7e-40 171.4 322 32.3
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 2.2e-40 171.0 339 32.4
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 3.7e-40 170.2 316 31.3
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 4.8e-40 169.9 245 38.4
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 4.8e-40 169.9 308 35.4
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 6.3e-40 169.5 322 31.7
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.1e-39 168.7 315 30.8
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 1.8e-39 167.9 316 32.3
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 3.1e-39 167.2 318 34.6
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 3.1e-39 167.2 233 37.8
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 4.1e-39 166.8 319 32.0
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 5.3e-39 166.4 227 38.8
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 5.3e-39 166.4 320 32.2
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 5.3e-39 166.4 324 32.4
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 5.3e-39 166.4 317 31.5
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 6.9e-39 166.0 230 40.4
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 6.9e-39 166.0 318 30.8
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 1.2e-38 165.2 337 31.5
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 2.0e-38 164.5 317 33.1
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 2.6e-38 164.1 322 32.0
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 3.4e-38 163.7 315 30.5
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 3.4e-38 163.7 315 31.1
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 4.5e-38 163.3 325 32.6
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 5.9e-38 162.9 336 31.0
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 5.9e-38 162.9 220 37.3
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 5.9e-38 162.9 327 33.6
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 7.7e-38 162.5 318 30.8
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 1.3e-37 161.8 353 32.6
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 1.7e-37 161.4 320 33.1
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 1.7e-37 161.4 230 39.6
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 2.2e-37 161.0 320 33.1
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 2.9e-37 160.6 329 31.6
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 2.9e-37 160.6 233 36.9
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 3.8e-37 160.2 245 37.6
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 3.8e-37 160.2 245 37.6
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 3.8e-37 160.2 323 32.5
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 5.0e-37 159.8 230 36.5
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 6.5e-37 159.5 318 32.4
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 1.1e-36 158.7 318 29.9
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 1.1e-36 158.7 231 36.4
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 1.1e-36 158.7 233 37.3
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 1.4e-36 158.3 319 33.5
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 1.4e-36 158.3 311 32.8
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 1.4e-36 158.3 346 31.5
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 1.9e-36 157.9 319 31.7
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 2.5e-36 157.5 230 36.5
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 3.2e-36 157.1 228 36.4
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 3.2e-36 157.1 318 32.4
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 4.2e-36 156.8 337 31.5
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 2.1e-35 154.5 227 33.9
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 2.1e-35 154.5 341 29.0
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 2.1e-35 154.5 317 30.0
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 3.6e-35 153.7 245 37.1
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 4.7e-35 153.3 242 34.7
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 4.7e-35 153.3 268 34.0
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 4.7e-35 153.3 329 31.3
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 6.1e-35 152.9 303 32.0
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 1.0e-34 152.1 319 30.7
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 1.0e-34 152.1 321 29.9
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 1.4e-34 151.8 318 32.4
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 3.0e-34 150.6 282 33.7
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 5.1e-34 149.8 230 33.9
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 6.7e-34 149.4 325 31.1
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 6.7e-34 149.4 222 36.9
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 1.1e-33 148.7 223 38.6
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 1.5e-33 148.3 241 34.4
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 2.0e-33 147.9 160 46.2
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 3.3e-33 147.1 223 39.0
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 3.3e-33 147.1 319 32.3
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 3.3e-33 147.1 185 40.0
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 4.4e-33 146.7 319 29.2
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 1.3e-32 145.2 227 33.5
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 1.7e-32 144.8 228 34.2
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 2.2e-32 144.4 343 30.9
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 2.8e-32 144.1 274 32.5
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 2.8e-32 144.1 220 38.2
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 8.2e-32 142.5 277 32.9
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 1.8e-31 141.4 231 36.8
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 5.3e-31 139.8 272 34.2
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 9.1e-31 139.0 269 30.9
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 9.1e-31 139.0 318 28.6
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 1.2e-30 138.7 220 34.1
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 2.0e-30 137.9 302 31.1
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 6.5e-29 132.9 171 38.0
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 1.9e-28 131.3 172 40.1
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 5.5e-28 129.8 273 31.5
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 9.4e-28 129.0 149 42.3
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 4.4e-25 120.2 164 39.0
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 1.3e-24 118.6 101 50.5
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 1.3e-24 118.6 172 38.4
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 1.7e-24 118.2 142 43.0
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 1.7e-24 118.2 233 32.2
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 3.7e-24 117.1 161 36.6
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 2.6e-22 110.9 272 32.4
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 4.5e-22 110.2 239 31.8
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 7.2e-20 102.8 350 25.1
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 9.4e-20 102.4 152 36.8
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 6.1e-19 99.8 328 27.1
PRCOL_00001551 Prasinoderma coloniale HOM05D005679 ORTHO05D007228 5.7e-17 93.2 175 34.3
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 1.3e-16 92.0 93 47.3
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 3.7e-16 90.5 143 38.5
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 1.0e-13 82.4 105 38.1
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 7.2e-12 76.3 113 38.9
Lsat_1_v5_gn_1_48021 Lactuca sativa HOM05D005679 ORTHO05D007228 2.3e-10 71.2 82 39.0
Gorai.006G155900 Gossypium raimondii HOM05D005679 ORTHO05D007228 1.7e-08 65.1 76 38.2
Gohir.D09G135950 Gossypium hirsutum HOM05D005679 ORTHO05D007228 4.9e-08 63.5 76 36.8
Actinidia14313 Actinidia chinensis HOM05D005679 ORTHO05D007228 1.2e-06 58.9 81 43.2
Lj2A135G55 Lonicera japonica HOM05D005679 ORTHO05D007228 2.0e-06 58.2 71 35.2


User provided reference genes

Program Settings