Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g9135 Chara braunii HOM05D003319 ORTHO05D003739 0.0e+00 2102.0 1270 100.0
Lj4A737G58 Lonicera japonica HOM05D003319 ORTHO05D003739 2.4e-17 95.9 57 75.4
Mapoly0014s0193 Marchantia polymorpha HOM05D003319 ORTHO05D003739 2.4e-17 95.9 736 26.8
SEGI_24455 Sequoiadendron giganteum HOM05D003319 ORTHO05D003739 3.8e-15 88.6 156 37.8
CAN.G806.11 Capsicum annuum HOM05D003319 ORTHO05D003739 6.5e-15 87.8 59 69.5
CiPaw.08G055800 Carya illinoinensis HOM05D003319 ORTHO05D003739 6.5e-15 87.8 123 45.5
ATR0582G130 Amborella trichopoda HOM05D003319 ORTHO05D003739 1.4e-14 86.7 55 69.1
TAR376G1177 Trochodendron aralioides HOM05D003319 ORTHO05D003739 1.4e-14 86.7 190 38.9
Haze_22463 Corylus avellana HOM05D003319 ORTHO05D003739 1.9e-14 86.3 179 37.4
Nitab4.5_0001607g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 1.9e-14 86.3 57 70.2
Solyc12g087970.2 Solanum lycopersicum HOM05D003319 ORTHO05D003739 1.9e-14 86.3 57 70.2
Sopen12g030000 Solanum pennellii HOM05D003319 ORTHO05D003739 1.9e-14 86.3 57 70.2
Cpa.g.sc21.26 Carica papaya HOM05D003319 ORTHO05D003739 2.5e-14 85.9 138 42.8
Cfa013800 Carpinus fangiana HOM05D003319 ORTHO05D003739 2.5e-14 85.9 172 39.5
CDE11G0791 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 3.2e-14 85.5 132 43.2
DCAR_012853 Daucus carota HOM05D003319 ORTHO05D003739 3.2e-14 85.5 57 71.9
Nitab4.5_0000131g0210 Nicotiana tabacum HOM05D003319 ORTHO05D003739 4.2e-14 85.1 56 69.6
Nitab4.5_0000354g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 4.2e-14 85.1 82 56.1
Nitab4.5_0005913g0020 Nicotiana tabacum HOM05D003319 ORTHO05D003739 4.2e-14 85.1 61 65.6
vmacro04648 Vaccinium macrocarpon HOM05D003319 ORTHO05D003739 5.5e-14 84.7 154 40.3
MBI16_g19592_MAGBIO Magnolia biondii HOM05D003319 ORTHO05D003739 9.4e-14 84.0 143 42.0
ECA232G2539 Erigeron canadensis HOM05D001083 ORTHO05D001637 1.2e-13 83.6 73 57.5
Carub.0001s0905 Capsella rubella HOM05D003319 ORTHO05D003739 1.6e-13 83.2 103 48.5
PGR042G0823 Punica granatum HOM05D003319 ORTHO05D003739 1.6e-13 83.2 57 66.7
CANSAT35G1730 Cannabis sativa HOM05D003319 ORTHO05D003739 2.1e-13 82.8 55 69.1
Pp3c8_16730 Physcomitrium patens HOM05D003319 ORTHO05D003739 2.1e-13 82.8 57 63.2
Sp1g08300 Schrenkiella parvula HOM05D003319 ORTHO05D003739 2.1e-13 82.8 204 36.3
CARHR009680 Cardamine hirsuta HOM05D003319 ORTHO05D003739 4.6e-13 81.6 63 57.1
CDE05G3064 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 4.6e-13 81.6 131 40.5
HPP92_016140 Vanilla planifolia HOM05D003319 ORTHO05D003739 4.6e-13 81.6 118 44.9
GSVIVG01009184001 Vitis vinifera HOM05D003319 ORTHO05D003739 4.6e-13 81.6 176 35.2
Haze_23237 Corylus avellana HOM05D003319 ORTHO05D003739 6.1e-13 81.3 112 46.4
MELO3C003521.2 Cucumis melo HOM05D003319 ORTHO05D003739 6.1e-13 81.3 55 67.3
CiPaw.07G165000 Carya illinoinensis HOM05D003319 ORTHO05D003739 7.9e-13 80.9 198 37.4
PSO170G3999 Papaver somniferum HOM05D003319 ORTHO05D003739 1.4e-12 80.1 61 63.9
PSO210G3859 Papaver somniferum HOM05D003319 ORTHO05D003739 1.4e-12 80.1 61 63.9
TAR628G1108 Trochodendron aralioides HOM05D003319 ORTHO05D003739 1.4e-12 80.1 253 33.6
AL1G20260 Arabidopsis lyrata HOM05D003319 ORTHO05D003739 1.8e-12 79.7 176 35.8
CiPaw.14G112200 Carya illinoinensis HOM05D003319 ORTHO05D003739 1.8e-12 79.7 78 55.1
Aa31LG1G5280 Aethionema arabicum HOM05D003319 ORTHO05D003739 2.3e-12 79.3 180 37.8
CsaV3_2G030210 Cucumis sativus L. HOM05D003319 ORTHO05D003739 2.3e-12 79.3 54 64.8
ClCG11G014590 Citrullus lanatus HOM05D003319 ORTHO05D003739 3.9e-12 78.6 74 56.8
Oeu018565.2 Olea europaea HOM05D003319 ORTHO05D003739 3.9e-12 78.6 74 51.4
Cfa009865 Carpinus fangiana HOM05D003319 ORTHO05D003739 6.7e-12 77.8 112 44.6
HanXRQChr15g0484821 Helianthus annuus HOM05D003319 ORTHO05D003739 6.7e-12 77.8 106 43.4
Potri.002G106500 Populus trichocarpa HOM05D003319 ORTHO05D003739 6.7e-12 77.8 139 38.8
AT1G09710 Arabidopsis thaliana HOM05D003319 ORTHO05D003739 8.8e-12 77.4 180 35.6
Nn1g05581 Nelumbo nucifera HOM05D003319 ORTHO05D003739 8.8e-12 77.4 190 36.8
Manes.18G058300 Manihot esculenta HOM05D003319 ORTHO05D003739 1.1e-11 77.0 106 45.3
Dinv42609 Davidia involucrata HOM05D003319 ORTHO05D003739 1.5e-11 76.6 194 36.6
Duzib093G0230 Durio zibethinus HOM05D003319 ORTHO05D003739 1.9e-11 76.3 115 41.7
CAN.G193.10 Capsicum annuum HOM05D003319 ORTHO05D003739 2.5e-11 75.9 54 64.8
HanXRQChr05g0163341 Helianthus annuus HOM05D003319 ORTHO05D003739 2.5e-11 75.9 58 60.3
Hma1.2p1_0010F.1_g006630 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 2.5e-11 75.9 128 39.8
Cc10_g15920 Coffea canephora HOM05D003319 ORTHO05D003739 3.3e-11 75.5 134 39.6
PSO478G0452 Papaver somniferum HOM05D003319 ORTHO05D003739 4.3e-11 75.1 57 64.9
Atru.chr13.1006 Acer truncatum HOM05D003319 ORTHO05D003739 5.7e-11 74.7 140 36.4
Hund17284 Selenicereus undatus HOM05D003319 ORTHO05D003739 7.4e-11 74.3 159 36.5
CAN.G475.23 Capsicum annuum HOM05D003319 ORTHO05D003739 9.7e-11 73.9 54 61.1
ClCG08G011640 Citrullus lanatus HOM05D003319 ORTHO05D003739 9.7e-11 73.9 134 38.1
CsaV3_3G048000 Cucumis sativus L. HOM05D003319 ORTHO05D003739 9.7e-11 73.9 190 32.6
ECA246G1786 Erigeron canadensis HOM05D003319 ORTHO05D003739 9.7e-11 73.9 100 45.0
Gohir.D01G114100 Gossypium hirsutum HOM05D003319 ORTHO05D003739 9.7e-11 73.9 130 38.5
Gorai.002G139000 Gossypium raimondii HOM05D003319 ORTHO05D003739 9.7e-11 73.9 130 38.5
Lsat_1_v5_gn_9_74001 Lactuca sativa HOM05D003319 ORTHO05D003739 9.7e-11 73.9 141 38.3
Peaxi162Scf00454g00323 Petunia axillaris HOM05D003319 ORTHO05D003739 9.7e-11 73.9 184 35.3
Prupe.1G532600 Prunus persica HOM05D003319 ORTHO05D003739 9.7e-11 73.9 100 47.0
TWI56G0998 Tripterygium wilfordii HOM05D003319 ORTHO05D003739 9.7e-11 73.9 165 38.2
Rhsim07G0212100 Rhododendron simsii HOM05D003319 ORTHO05D003739 1.3e-10 73.6 85 47.1
TWI36G0459 Tripterygium wilfordii HOM05D003319 ORTHO05D003739 1.3e-10 73.6 179 34.1
Solyc04g076360.4 Solanum lycopersicum HOM05D003319 ORTHO05D003739 1.7e-10 73.2 67 56.7
Aqoxy5G01379 Aquilegia oxysepala HOM05D003319 ORTHO05D003739 2.2e-10 72.8 97 42.3
Duzib041G0541 Durio zibethinus HOM05D003319 ORTHO05D003739 2.2e-10 72.8 113 41.6
Gohir.A01G126500 Gossypium hirsutum HOM05D003319 ORTHO05D003739 2.2e-10 72.8 130 38.5
QL01p017023 Quercus lobata HOM05D003319 ORTHO05D003739 2.8e-10 72.4 48 68.8
Aqoxy5G01378 Aquilegia oxysepala HOM05D003319 ORTHO05D003739 3.7e-10 72.0 113 40.7
CSS0018207 Camellia sinensis var. sinensis HOM05D003319 ORTHO05D003739 4.8e-10 71.6 48 68.8
Dinv44863 Davidia involucrata HOM05D001049 ORTHO05D001986 4.8e-10 71.6 48 68.8
Eucgr.F02154 Eucalyptus grandis HOM05D003319 ORTHO05D003739 4.8e-10 71.6 167 35.3
THA.LOC104816794 Tarenaya hassleriana HOM05D003319 ORTHO05D003739 4.8e-10 71.6 181 33.7
Lsat_1_v5_gn_6_104940 Lactuca sativa HOM05D003319 ORTHO05D003739 6.3e-10 71.2 164 34.1
Manes.02G144600 Manihot esculenta HOM05D003319 ORTHO05D003739 6.3e-10 71.2 203 31.5
Sabra02G0083800 Salix brachista HOM05D003319 ORTHO05D003739 1.1e-09 70.5 65 55.4
Sed0014936 Sechium edule HOM05D003319 ORTHO05D003739 1.1e-09 70.5 136 36.8
Sed0025417 Sechium edule HOM05D003319 ORTHO05D003739 1.1e-09 70.5 169 36.7
Hund04947 Selenicereus undatus HOM05D003319 ORTHO05D003739 1.1e-09 70.5 158 35.4
unitig_32.g10947 Utricularia gibba HOM05D003319 ORTHO05D003739 1.1e-09 70.5 73 45.2
PSO782G3079 Papaver somniferum HOM05D003319 ORTHO05D003739 1.4e-09 70.1 58 62.1
TPR.G6339 Trifolium pratense HOM05D003319 ORTHO05D003739 1.4e-09 70.1 82 47.6
Ciclev10000622m.g Citrus clementina HOM05D003319 ORTHO05D003739 2.4e-09 69.3 207 32.4
Peaxi162Scf00160g01038 Petunia axillaris HOM05D003319 ORTHO05D003739 2.4e-09 69.3 240 33.3
RcHm_v2.0_Chr7g0235501 Rosa chinensis HOM05D003319 ORTHO05D003739 2.4e-09 69.3 62 53.2
C05p07790 Brassica napus HOM05D003319 ORTHO05D003739 3.1e-09 68.9 68 47.1
Prupe.1G532700 Prunus persica HOM05D003319 ORTHO05D003739 3.1e-09 68.9 53 62.3
PGR031G0455 Punica granatum HOM05D003319 ORTHO05D003739 3.1e-09 68.9 136 40.4
Medtr8g024690 Medicago truncatula HOM05D003319 ORTHO05D003739 4.1e-09 68.6 55 54.5
MD08G1198900 Malus domestica HOM05D003319 ORTHO05D003739 5.3e-09 68.2 77 45.5
Sed0024254 Sechium edule HOM05D003319 ORTHO05D003739 5.3e-09 68.2 79 51.9
MELO3C011083.2 Cucumis melo HOM05D003319 ORTHO05D003739 6.9e-09 67.8 49 63.3
Sc26g0002970 Simmondsia chinensis HOM05D003319 ORTHO05D003739 6.9e-09 67.8 234 31.6
Sopen00g008100 Solanum pennellii HOM05D003319 ORTHO05D003739 6.9e-09 67.8 140 37.1
AUR62014349 Chenopodium quinoa HOM05D003319 ORTHO05D003739 9.1e-09 67.4 151 37.1
BraA06t23850Z Brassica rapa HOM05D003319 ORTHO05D003739 1.2e-08 67.0 169 32.0
PSO478G2921 Papaver somniferum HOM05D003319 ORTHO05D003739 1.2e-08 67.0 129 37.2
BolC5t29530H Brassica oleracea HOM05D003319 ORTHO05D003739 1.5e-08 66.6 173 32.4
QL09p017848 Quercus lobata HOM05D003319 ORTHO05D003739 1.5e-08 66.6 258 31.0
PGSC0003DMG400009342 Solanum tuberosum HOM05D003319 ORTHO05D003739 1.5e-08 66.6 145 39.3
Hma1.2p1_0616F.1_g189970 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 4.5e-08 65.1 61 57.4
A06p06390 Brassica napus HOM05D003319 ORTHO05D003739 7.7e-08 64.3 176 31.8
Glyma.04G095300 Glycine max HOM05D003319 ORTHO05D003739 7.7e-08 64.3 55 52.7
Glyma.06G097100 Glycine max HOM05D003319 ORTHO05D003739 7.7e-08 64.3 55 52.7
Ca_23436_v3 Cicer arietinum L. HOM05D003319 ORTHO05D003739 1.0e-07 63.9 55 52.7
Lalb_Chr11g0064951 Lupinus albus HOM05D003319 ORTHO05D003739 1.0e-07 63.9 87 42.5
Lalb_Chr23g0270031 Lupinus albus HOM05D003319 ORTHO05D003739 1.3e-07 63.5 53 56.6
PSO478G0048 Papaver somniferum HOM05D003319 ORTHO05D003739 1.7e-07 63.2 164 34.1
Thecc.08G071400 Theobroma cacao HOM05D003319 ORTHO05D003739 1.7e-07 63.2 203 32.0
AUR62019092 Chenopodium quinoa HOM05D003319 ORTHO05D003739 2.2e-07 62.8 170 34.1
AT1G58220 Arabidopsis thaliana HOM05D003319 ORTHO05D003739 2.9e-07 62.4 186 30.6
BraA09t37477Z Brassica rapa HOM05D003319 ORTHO05D003739 2.9e-07 62.4 112 41.1
CARHR053790 Cardamine hirsuta HOM05D003319 ORTHO05D003739 2.9e-07 62.4 177 30.5
Lj1g0027025 Lotus japonicus HOM05D003319 ORTHO05D003739 2.9e-07 62.4 76 47.4
PSO478G3694 Papaver somniferum HOM05D003319 ORTHO05D003739 3.8e-07 62.0 128 36.7
Phvul.009G036300 Phaseolus vulgaris HOM05D003319 ORTHO05D003739 3.8e-07 62.0 55 50.9
Sp2g05390 Schrenkiella parvula HOM05D003319 ORTHO05D003739 3.8e-07 62.0 188 30.3
VMungo1309G1101 Vigna mungo HOM05D003319 ORTHO05D003739 3.8e-07 62.0 55 50.9
MSTRG.11807 Avicennia marina HOM05D003319 ORTHO05D003739 6.5e-07 61.2 157 32.5
BolC9t55230H Brassica oleracea HOM05D003319 ORTHO05D003739 6.5e-07 61.2 112 39.3
EL10Ac1g00993 Beta vulgaris HOM05D003319 ORTHO05D003739 8.5e-07 60.8 103 38.8
Carub.0002s0638 Capsella rubella HOM05D003319 ORTHO05D003739 8.5e-07 60.8 156 32.1
FAN13G1335 Fragaria x ananassa HOM05D003319 ORTHO05D003739 8.5e-07 60.8 126 35.7
Lalb_Chr08g0242551 Lupinus albus HOM05D003319 ORTHO05D003739 1.1e-06 60.5 53 54.7
Aa31LG2G10920 Aethionema arabicum HOM05D003319 ORTHO05D003739 1.9e-06 59.7 184 31.0
AL2G18190 Arabidopsis lyrata HOM05D003319 ORTHO05D003739 1.9e-06 59.7 183 33.3
MD15G1386000 Malus domestica HOM05D003319 ORTHO05D003739 1.9e-06 59.7 59 50.8
FAN08G0387 Fragaria x ananassa HOM05D003319 ORTHO05D003739 4.2e-06 58.5 137 32.8
Lj4A88T36 Lonicera japonica HOM05D003319 ORTHO05D003739 4.2e-06 58.5 71 46.5
Medtr3g100180 Medicago truncatula HOM05D003319 ORTHO05D003739 4.2e-06 58.5 128 34.4
SHI20380 Sapria himalayana HOM05D003319 ORTHO05D003739 5.5e-06 58.2 48 52.1
FAN04G1055 Fragaria x ananassa HOM05D003319 ORTHO05D003739 7.2e-06 57.8 153 35.3
Psat2g065280 Pisum sativum HOM05D003319 ORTHO05D003739 7.2e-06 57.8 49 57.1
Psat5g049040 Pisum sativum HOM05D003319 ORTHO05D003739 7.2e-06 57.8 171 33.9
COL.COLO4_35252 Corchorus olitorius HOM05D001049 ORTHO05D001986 9.4e-06 57.4 160 34.4
FvH4_5g34820 Fragaria vesca HOM05D003319 ORTHO05D003739 9.4e-06 57.4 137 32.8


User provided reference genes

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