Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 1.0e-102 376.7 186 100.0
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.9e-89 332.0 186 83.3
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.9e-89 332.0 186 83.3
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 5.4e-88 327.8 186 82.3
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 2.1e-87 325.9 186 81.7
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 9.6e-85 317.0 183 79.2
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 4.8e-84 314.7 172 85.5
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 1.3e-81 306.6 187 79.1
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 8.4e-81 303.9 187 78.1
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 8.4e-81 303.9 187 78.6
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 1.1e-80 303.5 187 78.1
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 4.2e-80 301.6 187 77.0
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 5.5e-80 301.2 187 77.0
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 5.5e-80 301.2 187 77.5
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 7.1e-80 300.8 187 77.0
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 9.3e-80 300.4 187 76.5
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 1.2e-79 300.1 187 76.5
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 1.6e-79 299.7 187 77.0
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 2.1e-79 299.3 187 75.4
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.7e-79 298.9 187 76.5
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 3.5e-79 298.5 187 76.5
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 3.5e-79 298.5 187 75.9
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 4.6e-79 298.1 186 75.8
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 4.6e-79 298.1 187 76.5
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 6.0e-79 297.7 187 75.4
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 6.0e-79 297.7 186 75.8
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 7.9e-79 297.4 187 76.5
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 1.0e-78 297.0 187 75.4
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 1.0e-78 297.0 187 75.9
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 1.0e-78 297.0 186 75.3
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 1.3e-78 296.6 186 74.7
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 2.3e-78 295.8 187 75.4
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 2.3e-78 295.8 187 74.9
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 2.3e-78 295.8 186 73.1
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 3.9e-78 295.0 186 74.2
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 3.9e-78 295.0 186 73.1
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 5.1e-78 294.7 187 76.5
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 5.1e-78 294.7 187 75.4
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 6.7e-78 294.3 186 73.7
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 6.7e-78 294.3 186 73.7
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 6.7e-78 294.3 186 74.2
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 6.7e-78 294.3 186 74.2
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 6.7e-78 294.3 186 74.2
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 6.7e-78 294.3 186 74.2
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 6.7e-78 294.3 186 73.7
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 6.7e-78 294.3 186 73.7
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 8.7e-78 293.9 187 75.4
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 8.7e-78 293.9 187 74.9
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 8.7e-78 293.9 187 75.4
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 8.7e-78 293.9 186 73.7
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 8.7e-78 293.9 186 74.2
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 8.7e-78 293.9 186 74.2
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.1e-77 293.5 187 74.9
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 1.1e-77 293.5 187 74.3
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 1.1e-77 293.5 187 73.3
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 1.1e-77 293.5 181 76.2
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 1.5e-77 293.1 187 74.3
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 1.5e-77 293.1 187 73.8
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.5e-77 293.1 181 75.1
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.5e-77 293.1 186 73.1
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 1.5e-77 293.1 186 75.3
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.9e-77 292.7 186 73.1
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 2.5e-77 292.4 187 75.4
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 2.5e-77 292.4 187 74.3
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 3.3e-77 292.0 187 75.9
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 3.3e-77 292.0 186 73.1
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 3.3e-77 292.0 186 73.7
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 3.3e-77 292.0 187 73.8
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 3.3e-77 292.0 187 72.7
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 3.3e-77 292.0 187 73.8
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 4.3e-77 291.6 181 74.6
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 4.3e-77 291.6 206 70.9
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 5.6e-77 291.2 187 73.3
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 5.6e-77 291.2 181 74.0
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 5.6e-77 291.2 181 74.0
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 7.4e-77 290.8 181 75.7
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 7.4e-77 290.8 181 75.7
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 7.4e-77 290.8 187 73.3
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 7.4e-77 290.8 181 74.6
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 7.4e-77 290.8 187 72.7
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 9.6e-77 290.4 188 72.9
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 1.6e-76 289.7 187 72.7
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 2.1e-76 289.3 187 72.7
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 2.1e-76 289.3 203 70.9
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 2.1e-76 289.3 187 72.2
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 2.8e-76 288.9 201 71.6
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 3.7e-76 288.5 181 73.5
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 3.7e-76 288.5 181 73.5
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 4.8e-76 288.1 187 73.3
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 6.2e-76 287.7 185 71.4
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 1.1e-75 287.0 187 72.2
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 1.1e-75 287.0 187 72.7
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 1.8e-75 286.2 187 73.3
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 1.8e-75 286.2 186 73.7
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 3.1e-75 285.4 187 72.7
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 3.1e-75 285.4 187 72.7
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 3.1e-75 285.4 187 72.7
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 3.1e-75 285.4 187 72.7
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 3.1e-75 285.4 196 70.4
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 3.1e-75 285.4 186 72.6
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 4.0e-75 285.0 187 73.3
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 4.0e-75 285.0 187 72.7
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 4.0e-75 285.0 187 72.7
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 4.0e-75 285.0 199 68.8
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 4.0e-75 285.0 187 73.8
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 5.3e-75 284.6 191 72.3
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 6.9e-75 284.3 187 70.1
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 9.0e-75 283.9 187 72.2
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 9.0e-75 283.9 187 72.2
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 1.2e-74 283.5 187 72.7
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 1.2e-74 283.5 187 72.7
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.5e-74 283.1 187 72.2
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 1.5e-74 283.1 186 72.0
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 4.5e-74 281.6 187 71.1
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 4.5e-74 281.6 187 71.7
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 7.6e-74 280.8 187 71.1
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 7.6e-74 280.8 187 69.0
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 1.0e-73 280.4 187 70.6
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.0e-73 280.4 186 69.4
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 2.2e-73 279.3 187 68.4
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 1.1e-72 276.9 186 70.4
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 1.9e-72 276.2 167 78.4
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 3.2e-72 275.4 181 70.7
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 7.1e-72 274.2 206 66.5
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 9.3e-72 273.9 209 65.6
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 4.6e-71 271.6 183 69.9
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 6.0e-71 271.2 163 77.3
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 1.8e-70 269.6 175 71.4
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 1.8e-70 269.6 187 67.9
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 6.7e-70 267.7 240 58.3
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 8.7e-70 267.3 207 62.8
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 8.5e-65 250.8 187 70.1
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 1.1e-64 250.4 161 74.5
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 1.4e-64 250.0 172 66.9
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 7.2e-64 247.7 149 79.9
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.2e-63 246.9 187 66.8
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 4.6e-63 245.0 152 77.6
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 3.0e-62 242.3 187 66.3
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 2.5e-61 239.2 188 64.9
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.3e-60 236.9 186 62.9
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.7e-60 236.5 132 82.6
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 8.2e-60 234.2 142 75.4
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 2.4e-59 232.6 168 63.1
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 2.9e-57 225.7 187 63.1
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 5.1e-54 214.9 158 63.9
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 2.4e-51 206.1 167 58.7
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 4.5e-50 201.8 183 53.6
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 2.2e-49 199.5 187 57.8
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.4e-48 196.8 187 56.1
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 3.6e-47 192.2 124 74.2
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 1.1e-40 170.6 98 79.6
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 2.3e-38 162.9 103 71.8
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 5.2e-38 161.8 106 72.6
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 4.8e-36 155.2 98 70.4
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 2.0e-34 149.8 175 46.3
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 2.0e-34 149.8 103 64.1
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 1.7e-33 146.7 102 64.7
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 4.2e-32 142.1 85 83.5
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 6.1e-23 111.7 68 75.0
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 9.8e-21 104.4 135 45.2
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 5.2e-14 82.0 52 76.9
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 9.8e-13 77.8 52 73.1
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 5.4e-11 72.0 49 71.4
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 9.2e-11 71.2 80 48.8
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 6.6e-09 65.1 45 68.9
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 2.5e-08 63.2 47 68.1
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 4.7e-07 58.9 41 63.4
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 1.1e-06 57.8 41 58.5
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 2.3e-06 56.6 39 61.5
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 2.3e-06 56.6 60 45.0


User provided reference genes

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