Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g8994 Chara braunii HOM05D000452 ORTHO05D000647 3.2e-111 406.0 204 100.0
Mapoly0103s0001 Marchantia polymorpha HOM05D000452 ORTHO05D000647 3.0e-24 117.1 214 33.6
SMO367G0695 Selaginella moellendorffii HOM05D000452 ORTHO05D000647 3.1e-21 107.1 198 33.8
Pp3c10_12000 Physcomitrium patens HOM05D000452 ORTHO05D000647 4.5e-20 103.2 200 35.0
SMO140G0087 Selaginella moellendorffii HOM05D000452 ORTHO05D000647 1.7e-19 101.3 200 32.5
Pp3c6_26940 Physcomitrium patens HOM05D000452 ORTHO05D000647 2.9e-19 100.5 199 32.2
TPR.G15783 Trifolium pratense HOM05D000452 ORTHO05D000647 3.8e-19 100.1 116 41.4
arahy.Tifrunner.gnm1.ann1.P5Q0L9 Arachis hypogaea HOM05D000452 ORTHO05D000647 6.5e-19 99.4 107 43.0
arahy.Tifrunner.gnm1.ann1.G6MTT1 Arachis hypogaea HOM05D000452 ORTHO05D000647 1.4e-18 98.2 107 42.1
Phvul.003G175600 Phaseolus vulgaris HOM05D000452 ORTHO05D000647 1.4e-18 98.2 111 42.3
ECA236G0118 Erigeron canadensis HOM05D000452 ORTHO05D000647 2.5e-18 97.4 107 41.1
Glyma.13G156600 Glycine max HOM05D000452 ORTHO05D000647 3.2e-18 97.1 108 42.6
Sc08g0004960 Simmondsia chinensis HOM05D000452 ORTHO05D000647 3.2e-18 97.1 107 42.1
VMungo1215G2021 Vigna mungo HOM05D000452 ORTHO05D000647 3.2e-18 97.1 108 41.7
Pp3c12_9430 Physcomitrium patens HOM05D000452 ORTHO05D000647 4.2e-18 96.7 203 32.5
Manes.14G140000 Manihot esculenta HOM05D000452 ORTHO05D000647 5.5e-18 96.3 134 38.8
Sed0007575 Sechium edule HOM05D000452 ORTHO05D000647 5.5e-18 96.3 135 37.8
AagrBONN_evm.TU.Sc2ySwM_344.1413 Anthoceros agrestis HOM05D000452 ORTHO05D000647 9.4e-18 95.5 198 31.8
arahy.Tifrunner.gnm1.ann1.I6E49E Arachis hypogaea HOM05D000452 ORTHO05D000647 1.2e-17 95.1 107 41.1
Glyma.17G104200 Glycine max HOM05D000452 ORTHO05D000647 1.2e-17 95.1 108 40.7
Cc06_g07340 Coffea canephora HOM05D000452 ORTHO05D000647 1.6e-17 94.7 107 40.2
Manes.06G040600 Manihot esculenta HOM05D000452 ORTHO05D000647 1.6e-17 94.7 210 31.9
CSS0047494 Camellia sinensis var. sinensis HOM05D000452 ORTHO05D000647 2.1e-17 94.4 107 40.2
HanXRQChr05g0141531 Helianthus annuus HOM05D000452 ORTHO05D000647 2.1e-17 94.4 201 31.3
Sabra06G0144600 Salix brachista HOM05D000452 ORTHO05D000647 2.1e-17 94.4 116 37.1
Glyma.15G208700 Glycine max HOM05D000452 ORTHO05D000647 2.7e-17 94.0 206 30.6
Sed0003353 Sechium edule HOM05D000452 ORTHO05D000647 2.7e-17 94.0 107 41.1
Dinv43198 Davidia involucrata HOM05D000452 ORTHO05D000647 3.6e-17 93.6 107 41.1
Medtr4g116840 Medicago truncatula HOM05D000452 ORTHO05D000647 3.6e-17 93.6 107 41.1
Rhsim01G0049500 Rhododendron simsii HOM05D000452 ORTHO05D000647 3.6e-17 93.6 200 32.0
Sp7g07190 Schrenkiella parvula HOM05D000452 ORTHO05D000647 3.6e-17 93.6 207 29.0
Peaxi162Scf00347g00326 Petunia axillaris HOM05D000452 ORTHO05D000647 4.6e-17 93.2 107 40.2
Potri.018G113100 Populus trichocarpa HOM05D000452 ORTHO05D000647 4.6e-17 93.2 110 38.2
VMungo1309G0535 Vigna mungo HOM05D000452 ORTHO05D000647 4.6e-17 93.2 107 39.3
AL7G44030 Arabidopsis lyrata HOM05D000452 ORTHO05D000647 6.1e-17 92.8 206 28.6
Carub.0007s3101 Capsella rubella HOM05D000452 ORTHO05D000647 6.1e-17 92.8 107 39.3
Lalb_Chr13g0301161 Lupinus albus HOM05D000452 ORTHO05D000647 6.1e-17 92.8 107 41.1
Psat0s2644g0040 Pisum sativum HOM05D000452 ORTHO05D000647 6.1e-17 92.8 110 39.1
Ah.14g078550 Amaranthus hybridus HOM05D000452 ORTHO05D000647 7.9e-17 92.4 108 41.7
Hma1.2p1_0182F.1_g080630 Hydrangea macrophylla HOM05D000452 ORTHO05D000647 7.9e-17 92.4 111 41.4
Lalb_Chr12g0198541 Lupinus albus HOM05D000452 ORTHO05D000647 7.9e-17 92.4 107 41.1
Zm00001eb041250 Zea mays HOM05D000452 ORTHO05D000647 7.9e-17 92.4 108 40.7
Ciclev10007533m.g Citrus clementina HOM05D000452 ORTHO05D000647 1.0e-16 92.0 120 39.2
Thhalv10003438m.g Eutrema salsugineum HOM05D000452 ORTHO05D000647 1.0e-16 92.0 206 27.7
FAN01G1180 Fragaria x ananassa HOM05D000452 ORTHO05D000647 1.0e-16 92.0 210 30.0
Os08g0439100 Oryza sativa ssp. japonica HOM05D000452 ORTHO05D000647 1.0e-16 92.0 199 31.2
RcHm_v2.0_Chr2g0086461 Rosa chinensis HOM05D000452 ORTHO05D000647 1.0e-16 92.0 208 29.8
SHI03234 Sapria himalayana HOM05D000452 ORTHO05D000647 1.0e-16 92.0 108 38.9
Sopen07g001110 Solanum pennellii HOM05D000452 ORTHO05D000647 1.0e-16 92.0 107 39.3
CAN.G520.40 Capsicum annuum HOM05D000452 ORTHO05D000647 1.4e-16 91.7 107 39.3
ClCG11G003630 Citrullus lanatus HOM05D000452 ORTHO05D000647 1.4e-16 91.7 107 41.1
MELO3C004450.2 Cucumis melo HOM05D000452 ORTHO05D000647 1.4e-16 91.7 107 41.1
CsaV3_2G003480 Cucumis sativus L. HOM05D000452 ORTHO05D000647 1.4e-16 91.7 107 41.1
Dinv41415 Davidia involucrata HOM05D000452 ORTHO05D000647 1.4e-16 91.7 207 30.0
Lsat_1_v5_gn_8_60041 Lactuca sativa HOM05D000452 ORTHO05D000647 1.4e-16 91.7 201 29.9
Lj4g0005431 Lotus japonicus HOM05D000452 ORTHO05D000647 1.8e-16 91.3 195 33.3
AT5G35180 Arabidopsis thaliana HOM05D000452 ORTHO05D000647 2.3e-16 90.9 206 28.6
HanXRQChr10g0281641 Helianthus annuus HOM05D000452 ORTHO05D000647 2.3e-16 90.9 201 30.8
Solyc07g005000.3 Solanum lycopersicum HOM05D000452 ORTHO05D000647 3.0e-16 90.5 107 38.3
Migut.K00364 Erythranthe guttata HOM05D000452 ORTHO05D000647 3.9e-16 90.1 202 30.7
FAN03G2109 Fragaria x ananassa HOM05D000452 ORTHO05D000647 3.9e-16 90.1 210 29.5
Psat4g034120 Pisum sativum HOM05D000452 ORTHO05D000647 3.9e-16 90.1 118 38.1
CiPaw.16G116900 Carya illinoinensis HOM05D000452 ORTHO05D000647 5.1e-16 89.7 200 29.0
DCAR_014828 Daucus carota HOM05D000452 ORTHO05D000647 5.1e-16 89.7 107 39.3
FvH4_7g03330 Fragaria vesca HOM05D000452 ORTHO05D000647 5.1e-16 89.7 210 29.5
FAN06G1990 Fragaria x ananassa HOM05D000452 ORTHO05D000647 5.1e-16 89.7 210 29.5
Gorai.001G029800 Gossypium raimondii HOM05D000452 ORTHO05D000647 5.1e-16 89.7 200 29.0
SHI24351 Sapria himalayana HOM05D000452 ORTHO05D000647 5.1e-16 89.7 202 30.2
vmacro21878 Vaccinium macrocarpon HOM05D000452 ORTHO05D000647 5.1e-16 89.7 107 39.3
Gohir.A07G025000 Gossypium hirsutum HOM05D000452 ORTHO05D000647 6.7e-16 89.4 200 29.0
Oeu050463.2 Olea europaea HOM05D000452 ORTHO05D000647 6.7e-16 89.4 110 37.3
Phvul.009G208300 Phaseolus vulgaris HOM05D000452 ORTHO05D000647 6.7e-16 89.4 110 38.2
Gohir.A05G049600 Gossypium hirsutum HOM05D000452 ORTHO05D000647 8.8e-16 89.0 108 38.0
Gohir.D05G051400 Gossypium hirsutum HOM05D000452 ORTHO05D000647 8.8e-16 89.0 108 38.0
Gohir.D07G028500 Gossypium hirsutum HOM05D000452 ORTHO05D000647 8.8e-16 89.0 200 29.5
Gorai.009G053100 Gossypium raimondii HOM05D000452 ORTHO05D000647 8.8e-16 89.0 108 38.0
Lj6g0026902 Lotus japonicus HOM05D000452 ORTHO05D000647 8.8e-16 89.0 206 29.6
Nitab4.5_0000416g0020 Nicotiana tabacum HOM05D000452 ORTHO05D000647 8.8e-16 89.0 107 39.3
SGA_v2.0_scaffold183G39856 Striga asiatica HOM05D000452 ORTHO05D000647 8.8e-16 89.0 201 30.3
TAR383G0911 Trochodendron aralioides HOM05D000452 ORTHO05D000647 8.8e-16 89.0 205 29.3
Aqoxy7G03511 Aquilegia oxysepala HOM05D000452 ORTHO05D000647 1.1e-15 88.6 118 38.1
MSTRG.26311 Avicennia marina HOM05D000452 ORTHO05D000647 1.1e-15 88.6 201 29.4
Duzib150G1465 Durio zibethinus HOM05D000452 ORTHO05D000647 1.1e-15 88.6 206 28.6
FAN10G0162 Fragaria x ananassa HOM05D000452 ORTHO05D000647 1.1e-15 88.6 210 29.0
Lalb_Chr08g0233861 Lupinus albus HOM05D000452 ORTHO05D000647 1.1e-15 88.6 107 38.3
MBI14_g13651_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D000647 1.1e-15 88.6 206 30.1
PSO063G6842 Papaver somniferum HOM05D000452 ORTHO05D000647 1.1e-15 88.6 201 30.3
THA.LOC104815402 Tarenaya hassleriana HOM05D000452 ORTHO05D000647 1.1e-15 88.6 200 28.5
TWI34G1684 Tripterygium wilfordii HOM05D000452 ORTHO05D000647 1.1e-15 88.6 124 37.1
CiPaw.15G179200 Carya illinoinensis HOM05D000452 ORTHO05D000647 1.5e-15 88.2 120 38.3
Ca_21606_v3 Cicer arietinum L. HOM05D000452 ORTHO05D000647 1.5e-15 88.2 107 37.4
Ca_21629_v3 Cicer arietinum L. HOM05D000452 ORTHO05D000647 1.5e-15 88.2 107 37.4
Eucgr.C04062 Eucalyptus grandis HOM05D000452 ORTHO05D000647 1.5e-15 88.2 204 30.4
FvH4_1g01530 Fragaria vesca HOM05D000452 ORTHO05D000647 2.0e-15 87.8 133 36.1
FAN19G0353 Fragaria x ananassa HOM05D000452 ORTHO05D000647 2.0e-15 87.8 133 36.1
FAN26G2398 Fragaria x ananassa HOM05D000452 ORTHO05D000647 2.0e-15 87.8 133 36.1
FAN28G0115 Fragaria x ananassa HOM05D000452 ORTHO05D000647 2.0e-15 87.8 133 36.1
PSO421G0133 Papaver somniferum HOM05D000452 ORTHO05D000647 2.0e-15 87.8 201 30.8
MD15G1157900 Malus domestica HOM05D000452 ORTHO05D000647 2.6e-15 87.4 113 37.2
Atru.chr7.196 Acer truncatum HOM05D000452 ORTHO05D000647 3.3e-15 87.0 120 36.7
GSVIVG01001043001 Vitis vinifera HOM05D000452 ORTHO05D000647 3.3e-15 87.0 196 32.1
FAN23G1964 Fragaria x ananassa HOM05D000452 ORTHO05D000647 4.4e-15 86.7 133 36.1
MD02G1283900 Malus domestica HOM05D000452 ORTHO05D000647 4.4e-15 86.7 204 32.4
Lj9C710G10 Lonicera japonica HOM05D000452 ORTHO05D000647 7.4e-15 85.9 107 37.4
Nitab4.5_0001671g0070 Nicotiana tabacum HOM05D000452 ORTHO05D000647 7.4e-15 85.9 194 29.4
Actinidia04255 Actinidia chinensis HOM05D000452 ORTHO05D000647 1.3e-14 85.1 199 29.6
Nn8g39750 Nelumbo nucifera HOM05D000452 ORTHO05D000647 1.3e-14 85.1 200 28.0
Thecc.09G037200 Theobroma cacao HOM05D000452 ORTHO05D000647 1.3e-14 85.1 200 29.0
EL10Ac8g18831 Beta vulgaris HOM05D000452 ORTHO05D000647 1.7e-14 84.7 206 30.6
HPP92_018516 Vanilla planifolia HOM05D000452 ORTHO05D000647 1.7e-14 84.7 206 32.0
Pp3c3_27440 Physcomitrium patens HOM05D000452 ORTHO05D000647 2.2e-14 84.3 164 36.6
Prupe.7G253100 Prunus persica HOM05D000452 ORTHO05D000647 2.2e-14 84.3 201 30.3
QL02p091578 Quercus lobata HOM05D000452 ORTHO05D000647 2.2e-14 84.3 203 29.6
Medtr2g449780 Medicago truncatula HOM05D000452 ORTHO05D000647 3.7e-14 83.6 206 28.6
Prupe.2G038700 Prunus persica HOM05D000452 ORTHO05D000647 4.8e-14 83.2 199 31.2
BcaB04g18057 Brassica carinata HOM05D000452 ORTHO05D000647 6.3e-14 82.8 206 28.2
COL.COLO4_18731 Corchorus olitorius HOM05D000452 ORTHO05D000647 1.4e-13 81.6 138 33.3
A08p09630 Brassica napus HOM05D000452 ORTHO05D000647 1.8e-13 81.3 206 27.7
BraA08t32960Z Brassica rapa HOM05D000452 ORTHO05D000647 1.8e-13 81.3 206 27.7
CANSAT11G1350 Cannabis sativa HOM05D000452 ORTHO05D000647 1.8e-13 81.3 108 36.1
Sabra18G0096200 Salix brachista HOM05D000452 ORTHO05D000647 2.4e-13 80.9 133 31.6
BcaC07g37673 Brassica carinata HOM05D000452 ORTHO05D000647 4.1e-13 80.1 206 27.2
BolC8t48044H Brassica oleracea HOM05D000452 ORTHO05D000647 4.1e-13 80.1 206 27.2
CARHR217280 Cardamine hirsuta HOM05D000452 ORTHO05D000647 5.3e-13 79.7 207 27.1
HanXRQChr09g0243291 Helianthus annuus HOM05D000452 ORTHO05D000647 5.3e-13 79.7 108 34.3
ATR0629G037 Amborella trichopoda HOM05D000452 ORTHO05D000647 9.1e-13 79.0 138 31.9
SEGI_34758 Sequoiadendron giganteum HOM05D000452 ORTHO05D000647 2.6e-12 77.4 112 32.1
Lsat_1_v5_gn_7_47401 Lactuca sativa HOM05D000452 ORTHO05D000647 5.9e-12 76.3 206 26.7
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 3.8e-11 73.6 106 37.7
Cpa.g.sc46.102 Carica papaya HOM05D000452 ORTHO05D000647 3.2e-10 70.5 83 38.6
Dinv42903 Davidia involucrata HOM05D000452 ORTHO05D000647 6.1e-09 66.2 107 32.7
unitig_736.g22222 Utricularia gibba HOM05D000452 ORTHO05D000647 6.1e-09 66.2 201 24.9
Hund21612 Selenicereus undatus HOM05D000452 ORTHO05D000647 1.0e-08 65.5 106 32.1
Actinidia38354 Actinidia chinensis HOM05D000452 ORTHO05D000647 1.4e-08 65.1 121 30.6
Aa31LG9G6040 Aethionema arabicum HOM05D000452 ORTHO05D000647 1.8e-08 64.7 108 31.5
Nn2g12264 Nelumbo nucifera HOM05D000452 ORTHO05D000647 1.8e-08 64.7 200 27.0
CSS0023521 Camellia sinensis var. sinensis HOM05D000452 ORTHO05D002419 3.0e-08 63.9 143 27.3
Nitab4.5_0004050g0030 Nicotiana tabacum HOM05D000452 ORTHO05D000647 5.2e-08 63.2 188 26.6
SGA_v2.0_scaffold116G32276 Striga asiatica HOM05D000452 ORTHO05D002419 5.2e-08 63.2 139 28.8
Glyma.10G210400 Glycine max HOM05D000452 ORTHO05D002419 1.1e-07 62.0 197 28.9
TPR.G31931 Trifolium pratense HOM05D000452 ORTHO05D000647 1.1e-07 62.0 235 24.7
Glyma.16G155200 Glycine max HOM05D000452 ORTHO05D002419 1.5e-07 61.6 202 27.7
MD11G1137600 Malus domestica HOM05D000452 ORTHO05D002419 1.5e-07 61.6 198 24.2
Glyma.13G325000 Glycine max HOM05D000452 ORTHO05D002419 2.6e-07 60.8 149 28.2
VMungo0720G1568 Vigna mungo HOM05D000452 ORTHO05D002419 2.6e-07 60.8 142 28.9
TWI63G1462 Tripterygium wilfordii HOM05D000452 ORTHO05D002419 3.3e-07 60.5 200 26.0
Peaxi162Scf00370g00044 Petunia axillaris HOM05D000452 ORTHO05D002419 7.4e-07 59.3 126 27.0
Phvul.007G095400 Phaseolus vulgaris HOM05D000452 ORTHO05D002419 7.4e-07 59.3 142 28.2
Lj3g0020118 Lotus japonicus HOM05D000452 ORTHO05D002419 2.2e-06 57.8 138 27.5
CSS0048847 Camellia sinensis var. sinensis HOM05D000452 ORTHO05D000647 2.8e-06 57.4 120 30.0
VMungo1080G1144 Vigna mungo HOM05D000452 ORTHO05D002419 2.8e-06 57.4 112 28.6
COL.COLO4_28422 Corchorus olitorius HOM05D000452 ORTHO05D002419 3.7e-06 57.0 106 27.4
Oeu001283.1 Olea europaea HOM05D000452 ORTHO05D002419 3.7e-06 57.0 112 26.8
Sc06g0010330 Simmondsia chinensis HOM05D000452 ORTHO05D002419 4.8e-06 56.6 154 25.3
arahy.Tifrunner.gnm1.ann1.P7YJ1Q Arachis hypogaea HOM05D000452 ORTHO05D002419 6.3e-06 56.2 137 24.8
MSTRG.27473 Avicennia marina HOM05D000452 ORTHO05D002419 6.3e-06 56.2 117 26.5
Phvul.005G134300 Phaseolus vulgaris HOM05D000452 ORTHO05D002419 6.3e-06 56.2 112 27.7
Glyma.12G174400 Glycine max HOM05D000452 ORTHO05D002419 8.2e-06 55.8 140 27.9
Lj5g0011450 Lotus japonicus HOM05D000452 ORTHO05D002419 8.2e-06 55.8 157 28.0
Prupe.6G103400 Prunus persica HOM05D000452 ORTHO05D002419 8.2e-06 55.8 154 24.7
HPP92_022408 Vanilla planifolia HOM05D000452 ORTHO05D002419 8.2e-06 55.8 205 24.9
HPP92_027504 Vanilla planifolia HOM05D000452 ORTHO05D002419 8.2e-06 55.8 205 24.9


User provided reference genes

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