Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 2.3e-128 462.2 229 100.0
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 5.5e-50 201.8 162 59.3
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 5.2e-48 195.3 157 58.6
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 5.2e-48 195.3 162 59.3
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 7.5e-47 191.4 221 47.5
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 4.9e-46 188.7 126 69.8
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 6.3e-46 188.3 139 64.7
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 1.4e-45 187.2 139 64.7
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 1.8e-45 186.8 135 66.7
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 5.4e-45 185.3 126 66.7
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 7.0e-45 184.9 139 63.3
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 7.0e-45 184.9 135 66.7
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 1.2e-44 184.1 126 67.5
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 1.6e-44 183.7 126 68.3
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 1.6e-44 183.7 126 68.3
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 2.0e-44 183.3 125 68.0
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 2.0e-44 183.3 126 67.5
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 2.7e-44 183.0 126 66.7
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 5.9e-44 181.8 139 63.3
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 5.9e-44 181.8 126 67.5
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 5.9e-44 181.8 125 68.0
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 7.8e-44 181.4 122 68.0
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 1.3e-43 180.6 221 45.7
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 1.3e-43 180.6 221 45.7
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 1.3e-43 180.6 125 65.6
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 1.3e-43 180.6 221 46.2
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 1.3e-43 180.6 126 66.7
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 1.7e-43 180.3 126 67.5
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 1.7e-43 180.3 125 68.0
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 1.7e-43 180.3 125 68.0
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 2.3e-43 179.9 126 65.1
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 2.3e-43 179.9 125 66.4
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 5.0e-43 178.7 126 67.5
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 5.0e-43 178.7 125 67.2
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 5.0e-43 178.7 226 44.2
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 6.6e-43 178.3 217 45.6
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 6.6e-43 178.3 126 65.1
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 6.6e-43 178.3 125 67.2
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 6.6e-43 178.3 126 65.9
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 8.6e-43 177.9 126 65.1
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 8.6e-43 177.9 139 61.2
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 8.6e-43 177.9 126 64.3
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 1.1e-42 177.6 123 68.3
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 1.1e-42 177.6 123 68.3
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 1.1e-42 177.6 126 65.1
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 1.5e-42 177.2 123 66.7
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 1.5e-42 177.2 129 64.3
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 1.9e-42 176.8 135 62.2
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 1.9e-42 176.8 127 63.8
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 3.3e-42 176.0 126 65.9
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 5.6e-42 175.3 126 65.9
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 5.6e-42 175.3 126 65.1
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 7.3e-42 174.9 126 64.3
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 7.3e-42 174.9 122 65.6
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 9.5e-42 174.5 125 65.6
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 9.5e-42 174.5 118 68.6
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 1.2e-41 174.1 126 65.9
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 1.6e-41 173.7 125 64.0
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 1.6e-41 173.7 126 64.3
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 2.1e-41 173.3 123 65.9
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 2.8e-41 172.9 125 64.8
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 2.8e-41 172.9 125 64.8
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 3.6e-41 172.6 135 62.2
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 4.7e-41 172.2 123 65.0
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 4.7e-41 172.2 131 61.1
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 8.0e-41 171.4 123 64.2
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 8.0e-41 171.4 135 62.2
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 8.0e-41 171.4 131 63.4
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 1.0e-40 171.0 126 63.5
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 1.4e-40 170.6 124 63.7
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 1.4e-40 170.6 126 63.5
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 1.4e-40 170.6 129 62.8
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 1.8e-40 170.2 125 65.6
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 2.3e-40 169.9 138 57.2
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 2.3e-40 169.9 125 63.2
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 2.3e-40 169.9 125 63.2
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 2.3e-40 169.9 125 63.2
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 3.1e-40 169.5 125 63.2
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 3.1e-40 169.5 125 63.2
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 4.4e-39 165.6 122 60.7
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 5.8e-39 165.2 126 61.1
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 1.7e-38 163.7 121 62.0
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 1.6e-36 157.1 125 60.8
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 2.0e-36 156.8 125 60.0
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 2.0e-36 156.8 125 60.8
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 2.3e-35 153.3 109 64.2
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 2.1e-33 146.7 128 58.6
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 4.0e-32 142.5 105 63.8
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 3.4e-31 139.4 133 51.9
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 9.8e-31 137.9 106 61.3
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 2.9e-30 136.3 98 65.3
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 4.4e-23 112.5 71 70.4
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 1.6e-20 104.0 73 64.4
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 4.6e-20 102.4 85 60.0
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 7.8e-20 101.7 123 43.1
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 5.1e-19 99.0 75 61.3
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 1.1e-18 97.8 75 61.3
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 2.5e-18 96.7 72 63.9
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 7.3e-18 95.1 85 55.3
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 1.6e-17 94.0 71 62.0
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 1.6e-17 94.0 72 63.9
TPR.G40530 Trifolium pratense HOM05D007064 ORTHO05D008772 4.0e-16 89.4 54 72.2
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 5.2e-16 89.0 54 72.2
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 7.1e-13 78.6 56 62.5
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 2.3e-11 73.6 46 69.6
CBR_g46693 Chara braunii HOM05D000019 ORTHO05D008838 1.1e-10 71.2 42 81.0
CBR_g6359 Chara braunii HOM05D007064 ORTHO05D008772 4.4e-07 59.3 96 35.4
MCO05G602 Micromonas commoda HOM05D007064 ORTHO05D008772 3.8e-06 56.2 80 40.0


User provided reference genes

Program Settings