Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g88565 Chara braunii HOM05D005920 ORTHO05D007211 3.1e-194 682.2 504 100.0
TAR376G1095 Trochodendron aralioides HOM05D005920 ORTHO05D007211 9.1e-21 105.9 268 31.0
Manes.18G076800 Manihot esculenta HOM05D005920 ORTHO05D007211 5.9e-20 103.2 267 31.8
SEGI_11742 Sequoiadendron giganteum HOM05D005920 ORTHO05D007211 1.0e-19 102.4 484 25.0
THA.LOC104817311 Tarenaya hassleriana HOM05D005920 ORTHO05D007211 1.3e-19 102.1 360 26.9
FAN20G1415 Fragaria x ananassa HOM05D005920 ORTHO05D007211 2.9e-19 100.9 269 28.6
Sp6g09620 Schrenkiella parvula HOM05D005920 ORTHO05D007211 3.8e-19 100.5 264 28.8
CARHR259410 Cardamine hirsuta HOM05D005920 ORTHO05D007211 6.5e-19 99.8 359 27.0
Carub.0006s2688 Capsella rubella HOM05D005920 ORTHO05D007211 8.5e-19 99.4 360 26.7
Cc10_g11840 Coffea canephora HOM05D005920 ORTHO05D007211 1.5e-18 98.6 268 29.9
Nitab4.5_0001273g0050 Nicotiana tabacum HOM05D005920 ORTHO05D007211 2.5e-18 97.8 261 29.1
Dinv07224 Davidia involucrata HOM05D005920 ORTHO05D007211 3.2e-18 97.4 266 28.9
Eucgr.F03788 Eucalyptus grandis HOM05D005920 ORTHO05D007211 3.2e-18 97.4 271 29.2
Thhalv10028662m.g Eutrema salsugineum HOM05D005920 ORTHO05D007211 3.2e-18 97.4 359 26.5
Duzib093G1431 Durio zibethinus HOM05D005920 ORTHO05D007211 5.5e-18 96.7 266 29.3
vmacro00831 Vaccinium macrocarpon HOM05D005920 ORTHO05D007211 7.2e-18 96.3 268 32.1
TWI56G1135 Tripterygium wilfordii HOM05D005920 ORTHO05D007211 1.6e-17 95.1 268 29.5
RcHm_v2.0_Chr6g0295691 Rosa chinensis HOM05D005920 ORTHO05D007211 2.1e-17 94.7 268 28.4
FvH4_2g26840 Fragaria vesca HOM05D005920 ORTHO05D007211 2.7e-17 94.4 268 28.7
CiPaw.06G030600 Carya illinoinensis HOM05D005920 ORTHO05D007211 3.6e-17 94.0 261 29.1
Ciclev10001211m.g Citrus clementina HOM05D005920 ORTHO05D007211 3.6e-17 94.0 264 27.7
AL6G42090 Arabidopsis lyrata HOM05D005920 ORTHO05D007211 6.1e-17 93.2 365 25.8
FAN24G1536 Fragaria x ananassa HOM05D005920 ORTHO05D007211 6.1e-17 93.2 269 27.9
Aqoxy6G00210 Aquilegia oxysepala HOM05D005920 ORTHO05D007211 1.0e-16 92.4 264 29.2
Gohir.D05G237100 Gossypium hirsutum HOM05D005920 ORTHO05D007211 1.8e-16 91.7 266 29.7
Gorai.009G245500 Gossypium raimondii HOM05D005920 ORTHO05D007211 2.3e-16 91.3 266 29.7
Gohir.A05G234800 Gossypium hirsutum HOM05D005920 ORTHO05D007211 3.0e-16 90.9 266 29.7
Prupe.1G499100 Prunus persica HOM05D005920 ORTHO05D007211 3.0e-16 90.9 261 28.4
CAN.G127.17 Capsicum annuum HOM05D005920 ORTHO05D007211 5.2e-16 90.1 261 27.6
Hma1.2p1_0186F.1_g081770 Hydrangea macrophylla HOM05D005920 ORTHO05D007211 5.2e-16 90.1 262 30.2
CANSAT25G3381 Cannabis sativa HOM05D005920 ORTHO05D007211 6.8e-16 89.7 267 27.7
Gorai.010G050100 Gossypium raimondii HOM05D005920 ORTHO05D007211 6.8e-16 89.7 266 28.9
FAN27G1284 Fragaria x ananassa HOM05D005920 ORTHO05D007211 8.8e-16 89.4 270 27.8
Potri.005G177400 Populus trichocarpa HOM05D005920 ORTHO05D007211 8.8e-16 89.4 259 29.3
HPP92_011946 Vanilla planifolia HOM05D005920 ORTHO05D007211 1.2e-15 89.0 268 28.0
ECA246G2944 Erigeron canadensis HOM05D005920 ORTHO05D007211 1.5e-15 88.6 267 30.0
Os04g0690300 Oryza sativa ssp. japonica HOM05D005920 ORTHO05D007211 1.5e-15 88.6 268 28.0
AT4G08320 Arabidopsis thaliana HOM05D005920 ORTHO05D007211 2.0e-15 88.2 360 25.6
BcaC03g16447 Brassica carinata HOM05D005920 ORTHO05D007211 2.6e-15 87.8 359 25.3
BolSC33t60638H Brassica oleracea HOM05D005920 ORTHO05D007211 2.6e-15 87.8 359 25.1
Lsat_1_v5_gn_6_112921 Lactuca sativa HOM05D005920 ORTHO05D007211 2.6e-15 87.8 267 28.8
AagrBONN_evm.TU.Sc2ySwM_344.2076 Anthoceros agrestis HOM05D009220 ORTHO05D012167 3.4e-15 87.4 265 29.8
A02p26870 Brassica napus HOM05D005920 ORTHO05D007211 3.4e-15 87.4 359 25.1
BraA02t07698Z Brassica rapa HOM05D005920 ORTHO05D007211 3.4e-15 87.4 359 25.1
C02p42670 Brassica napus HOM05D005920 ORTHO05D007211 4.4e-15 87.0 359 25.1
Sopen11g007640 Solanum pennellii HOM05D005920 ORTHO05D007211 4.4e-15 87.0 263 27.8
ATR0584G080 Amborella trichopoda HOM05D005920 ORTHO05D007211 5.7e-15 86.7 370 25.9
Aa31LG9G14240 Aethionema arabicum HOM05D005920 ORTHO05D007211 7.5e-15 86.3 281 27.8
Actinidia29463 Actinidia chinensis HOM05D005920 ORTHO05D007211 9.8e-15 85.9 261 30.3
Hund26813 Selenicereus undatus HOM05D005920 ORTHO05D007211 9.8e-15 85.9 264 29.5
Lalb_Chr10g0101741 Lupinus albus HOM05D005920 ORTHO05D007211 1.7e-14 85.1 274 28.8
QL09p034934 Quercus lobata HOM05D005920 ORTHO05D007211 1.7e-14 85.1 265 28.3
Mapoly0102s0012 Marchantia polymorpha HOM05D005920 ORTHO05D007211 2.2e-14 84.7 268 28.7
Solyc11g012900.3 Solanum lycopersicum HOM05D005920 ORTHO05D007211 2.2e-14 84.7 263 27.8
unitig_749.g13933 Utricularia gibba HOM05D005920 ORTHO05D007211 2.2e-14 84.7 265 28.3
Lj1g0027048 Lotus japonicus HOM05D005920 ORTHO05D007211 2.8e-14 84.3 265 27.2
PSO528G0030 Papaver somniferum HOM05D005920 ORTHO05D007211 3.7e-14 84.0 274 28.1
MELO3C010480.2 Cucumis melo HOM05D005920 ORTHO05D007211 4.8e-14 83.6 266 29.7
Sed0014256 Sechium edule HOM05D005920 ORTHO05D007211 4.8e-14 83.6 265 29.1
Glyma.13G080100 Glycine max HOM05D005920 ORTHO05D007211 8.3e-14 82.8 359 24.8
MD15G1349900 Malus domestica HOM05D005920 ORTHO05D007211 8.3e-14 82.8 259 27.8
BcaB05g23941 Brassica carinata HOM05D005920 ORTHO05D007211 1.1e-13 82.4 359 23.7
Medtr1g030300 Medicago truncatula HOM05D005920 ORTHO05D007211 1.4e-13 82.0 264 27.3
AUR62019083 Chenopodium quinoa HOM05D005920 ORTHO05D007211 1.8e-13 81.6 341 26.4
AUR62014341 Chenopodium quinoa HOM05D005920 ORTHO05D007211 3.1e-13 80.9 283 27.9
Glyma.14G149300 Glycine max HOM05D005920 ORTHO05D007211 3.1e-13 80.9 359 24.0
SGA_v2.0_scaffold24G10464 Striga asiatica HOM05D005920 ORTHO05D007211 3.1e-13 80.9 265 27.5
Thecc.08G124700 Theobroma cacao HOM05D005920 ORTHO05D007211 5.4e-13 80.1 358 24.9
VMungo0647G0482 Vigna mungo HOM05D005920 ORTHO05D007211 9.1e-13 79.3 362 23.8
Zm00001eb076340 Zea mays HOM05D005920 ORTHO05D007211 1.2e-12 79.0 268 28.7
Atru.chr13.1453_Atru.chr13.1454 Acer truncatum HOM05D005920 ORTHO05D007211 1.6e-12 78.6 360 24.7
Atru.chr13.1476_Atru.chr13.1477 Acer truncatum HOM05D005920 ORTHO05D007211 1.6e-12 78.6 360 24.7
CsaV3_4G028230 Cucumis sativus L. HOM05D005920 ORTHO05D007211 2.0e-12 78.2 266 28.9
HanXRQChr05g0151131 Helianthus annuus HOM05D005920 ORTHO05D007211 3.5e-12 77.4 268 26.9
arahy.Tifrunner.gnm1.ann1.GZGN8Y Arachis hypogaea HOM05D005920 ORTHO05D007211 5.9e-12 76.6 267 27.3
Sc02g0006050 Simmondsia chinensis HOM05D005920 ORTHO05D007211 1.3e-11 75.5 260 27.3
TPR.G25796 Trifolium pratense HOM05D005920 ORTHO05D007211 2.3e-11 74.7 359 24.5
DCAR_014089 Daucus carota HOM05D005920 ORTHO05D007211 2.9e-11 74.3 365 24.7
Nn1g08784 Nelumbo nucifera HOM05D005920 ORTHO05D007211 2.9e-11 74.3 252 27.0
Phvul.008G163200 Phaseolus vulgaris HOM05D005920 ORTHO05D007211 2.9e-11 74.3 264 25.8
EL10Ac1g01005 Beta vulgaris HOM05D005920 ORTHO05D007211 3.8e-11 73.9 258 27.5
COL.COLO4_35924 Corchorus olitorius HOM05D005920 ORTHO05D007211 3.8e-11 73.9 244 27.0
SalBow7G4584 Salvia bowleyana HOM05D000555 ORTHO05D007211 5.0e-11 73.6 266 27.1
CDE09G0226 Ceratophyllum demersum HOM05D005920 ORTHO05D007211 6.6e-11 73.2 355 25.6
Psat6g041000 Pisum sativum HOM05D005920 ORTHO05D007211 1.5e-10 72.0 359 23.1
Migut.C01133 Erythranthe guttata HOM05D005920 ORTHO05D007211 3.3e-10 70.9 266 25.6
Nitab4.5_0001803g0120 Nicotiana tabacum HOM05D005920 ORTHO05D007211 3.3e-10 70.9 249 25.7
Sabra05G0133900 Salix brachista HOM05D005920 ORTHO05D007211 3.3e-10 70.9 246 27.6
Actinidia03473 Actinidia chinensis HOM05D005920 ORTHO05D007211 3.6e-09 67.4 362 24.3
RhsimUnG0093000 Rhododendron simsii HOM05D005920 ORTHO05D007211 3.6e-09 67.4 127 34.6
MSTRG.1445 Avicennia marina HOM05D005920 ORTHO05D007211 1.0e-08 65.9 362 22.7
Duzib116G0551 Durio zibethinus HOM05D005920 ORTHO05D007211 5.2e-08 63.5 127 31.5
ClCG11G015770 Citrullus lanatus HOM05D005920 ORTHO05D007211 1.2e-07 62.4 401 22.2
FAN24G0658 Fragaria x ananassa HOM05D005920 ORTHO05D007211 2.6e-07 61.2 269 23.4
Oeu017295.1 Olea europaea HOM05D005920 ORTHO05D007211 2.6e-07 61.2 247 26.3
Haze_00449 Corylus avellana HOM05D005920 ORTHO05D007211 9.8e-07 59.3 51 51.0
CSS0028049 Camellia sinensis var. sinensis HOM05D001875 ORTHO05D000106 2.2e-06 58.2 49 53.1
CSS0031690 Camellia sinensis var. sinensis HOM05D005920 ORTHO05D005317 2.2e-06 58.2 49 53.1
Lj4A625G10 Lonicera japonica HOM05D005920 ORTHO05D007211 2.2e-06 58.2 127 31.5
COL.COLO4_33710 Corchorus olitorius HOM05D000115 ORTHO05D005317 2.8e-06 57.8 51 52.9
SGA_v2.0_scaffold9G04898 Striga asiatica HOM05D000115 ORTHO05D005317 3.7e-06 57.4 49 55.1
CSS0035403 Camellia sinensis var. sinensis HOM05D005920 ORTHO05D007211 4.9e-06 57.0 51 51.0
SalBow7G3865 Salvia bowleyana HOM05D000115 ORTHO05D005317 4.9e-06 57.0 51 51.0
Zm00001eb283980 Zea mays HOM05D000115 ORTHO05D005317 6.3e-06 56.6 51 49.0
Cpa.g.sc50.66 Carica papaya HOM05D000115 ORTHO05D005317 8.3e-06 56.2 51 51.0


User provided reference genes

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