Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g8852 Chara braunii HOM05D006334 ORTHO05D008320 2.1e-138 496.1 332 100.0
Mapoly0114s0022 Marchantia polymorpha HOM05D006334 ORTHO05D008320 1.7e-47 194.1 294 55.1
CDE05G3377 Ceratophyllum demersum HOM05D006334 ORTHO05D008320 1.7e-44 184.1 189 62.4
AUR62020535 Chenopodium quinoa HOM05D006334 ORTHO05D008320 6.6e-44 182.2 203 56.7
Cfa020403 Carpinus fangiana HOM05D001306 ORTHO05D001159 4.3e-43 179.5 214 48.6
Potri.001G418900 Populus trichocarpa HOM05D006334 ORTHO05D008320 1.6e-42 177.6 195 52.8
Zm00001eb298180 Zea mays HOM05D006334 ORTHO05D008320 1.6e-42 177.6 190 55.3
QL08p012879 Quercus lobata HOM05D006334 ORTHO05D008320 2.8e-42 176.8 193 51.8
Haze_09629 Corylus avellana HOM05D006334 ORTHO05D008320 6.2e-42 175.6 189 57.1
Hund23297 Selenicereus undatus HOM05D006334 ORTHO05D008320 1.8e-41 174.1 209 51.2
TWI38G1766 Tripterygium wilfordii HOM05D006334 ORTHO05D008320 1.8e-41 174.1 195 58.5
CiPaw.12G127100 Carya illinoinensis HOM05D006334 ORTHO05D008320 2.3e-41 173.7 206 55.3
Lsat_1_v5_gn_7_109541 Lactuca sativa HOM05D006334 ORTHO05D008320 2.3e-41 173.7 303 53.8
Lj3g0002745 Lotus japonicus HOM05D006334 ORTHO05D008320 2.3e-41 173.7 192 61.5
AagrBONN_evm.TU.Sc2ySwM_368.826 Anthoceros agrestis HOM05D006334 ORTHO05D008320 4.0e-41 172.9 205 58.5
Eucgr.F03434 Eucalyptus grandis HOM05D006334 ORTHO05D008320 5.2e-41 172.6 195 57.4
Phvul.005G092400 Phaseolus vulgaris HOM05D006334 ORTHO05D008320 2.6e-40 170.2 192 57.8
Pp3c20_19360 Physcomitrium patens HOM05D006334 ORTHO05D008320 2.6e-40 170.2 223 53.8
Psat5g251960 Pisum sativum HOM05D006334 ORTHO05D008320 2.6e-40 170.2 196 56.1
Prupe.4G205200 Prunus persica HOM05D006334 ORTHO05D008320 4.4e-40 169.5 196 57.7
Ah.04g165560 Amaranthus hybridus HOM05D006334 ORTHO05D008320 1.3e-39 167.9 209 51.7
AagrBONN_evm.TU.Sc2ySwM_228.581 Anthoceros agrestis HOM05D006334 ORTHO05D008320 1.3e-39 167.9 210 55.7
SEGI_34639 Sequoiadendron giganteum HOM05D006334 ORTHO05D008320 1.3e-39 167.9 180 60.0
CSS0039549 Camellia sinensis var. sinensis HOM05D006334 ORTHO05D008320 1.7e-39 167.5 168 57.1
Ca_01740_v3 Cicer arietinum L. HOM05D006334 ORTHO05D008320 3.7e-39 166.4 193 62.2
Os07g0103200 Oryza sativa ssp. japonica HOM05D006334 ORTHO05D008320 3.7e-39 166.4 190 58.4
vmacro09744 Vaccinium macrocarpon HOM05D006334 ORTHO05D008320 8.3e-39 165.2 179 60.3
ClCG05G014700 Citrullus lanatus HOM05D006334 ORTHO05D008320 1.1e-38 164.9 201 56.2
Aqoxy1G03666 Aquilegia oxysepala HOM05D006334 ORTHO05D008320 1.9e-38 164.1 123 62.6
Dinv22296 Davidia involucrata HOM05D006334 ORTHO05D008320 1.9e-38 164.1 158 53.2
arahy.Tifrunner.gnm1.ann1.9AY9GA Arachis hypogaea HOM05D006334 ORTHO05D008320 3.2e-38 163.3 194 60.8
arahy.Tifrunner.gnm1.ann1.Q0MPW2 Arachis hypogaea HOM05D006334 ORTHO05D008320 3.2e-38 163.3 194 60.8
AUR62015668 Chenopodium quinoa HOM05D006334 ORTHO05D008320 4.1e-38 162.9 185 55.7
CAN.G1110.6 Capsicum annuum HOM05D006334 ORTHO05D008320 5.4e-38 162.5 188 57.4
MBI02_g23962_MAGBIO Magnolia biondii HOM05D006334 ORTHO05D008320 5.4e-38 162.5 123 62.6
Nn1g07058 Nelumbo nucifera HOM05D006334 ORTHO05D008320 5.4e-38 162.5 123 63.4
Nitab4.5_0002342g0070 Nicotiana tabacum HOM05D006334 ORTHO05D008320 5.4e-38 162.5 180 57.8
Sopen10g002410 Solanum pennellii HOM05D006334 ORTHO05D008320 5.4e-38 162.5 123 62.6
PSO210G7302 Papaver somniferum HOM05D006334 ORTHO05D008320 7.1e-38 162.2 123 62.6
Sc07g0002760 Simmondsia chinensis HOM05D006334 ORTHO05D008320 7.1e-38 162.2 180 60.0
Solyc10g006460.3 Solanum lycopersicum HOM05D006334 ORTHO05D008320 7.1e-38 162.2 176 58.5
TAR629G3436 Trochodendron aralioides HOM05D006334 ORTHO05D008320 7.1e-38 162.2 123 63.4
Lj8A166G85 Lonicera japonica HOM05D006334 ORTHO05D008320 9.2e-38 161.8 123 62.6
PSO832G3755 Papaver somniferum HOM05D006334 ORTHO05D008320 9.2e-38 161.8 123 62.6
Peaxi162Scf00407g00312 Petunia axillaris HOM05D006334 ORTHO05D008320 9.2e-38 161.8 145 58.6
SMO143G0307 Selaginella moellendorffii HOM05D006334 ORTHO05D008320 9.2e-38 161.8 136 59.6
ECA236G0521 Erigeron canadensis HOM05D006334 ORTHO05D008320 1.6e-37 161.0 131 60.3
CsaV3_3G023200 Cucumis sativus L. HOM05D006334 ORTHO05D008320 2.1e-37 160.6 191 56.5
CsaV3_UNG104770 Cucumis sativus L. HOM05D006334 ORTHO05D008320 2.1e-37 160.6 191 56.5
Nitab4.5_0002229g0170 Nicotiana tabacum HOM05D006334 ORTHO05D008320 2.1e-37 160.6 179 58.7
SGA_v2.0_scaffold101G29789 Striga asiatica HOM05D006334 ORTHO05D008320 2.1e-37 160.6 123 61.0
TPR.G19971 Trifolium pratense HOM05D006334 ORTHO05D008320 2.1e-37 160.6 196 60.7
GSVIVG01001978001 Vitis vinifera HOM05D006334 ORTHO05D008320 2.1e-37 160.6 137 58.4
MELO3C018091.2 Cucumis melo HOM05D006334 ORTHO05D008320 2.7e-37 160.2 180 58.9
DCAR_022532 Daucus carota HOM05D006334 ORTHO05D008320 2.7e-37 160.2 196 53.1
HanXRQChr11g0337741 Helianthus annuus HOM05D006334 ORTHO05D008320 2.7e-37 160.2 133 60.2
PGSC0003DMG400014399 Solanum tuberosum HOM05D006334 ORTHO05D008320 2.7e-37 160.2 123 61.8
Thecc.07G050800 Theobroma cacao HOM05D006334 ORTHO05D008320 3.5e-37 159.8 123 61.8
COL.COLO4_09585 Corchorus olitorius HOM05D006334 ORTHO05D008320 4.6e-37 159.5 177 59.9
Gorai.002G083500 Gossypium raimondii HOM05D006334 ORTHO05D008320 4.6e-37 159.5 123 61.0
PGR031G1291 Punica granatum HOM05D006334 ORTHO05D008320 4.6e-37 159.5 123 62.6
Gohir.D01G062800 Gossypium hirsutum HOM05D006334 ORTHO05D008320 6.0e-37 159.1 177 59.9
Manes.03G123900 Manihot esculenta HOM05D006334 ORTHO05D008320 6.0e-37 159.1 123 61.0
Migut.M01801 Erythranthe guttata HOM05D006334 ORTHO05D008320 7.8e-37 158.7 179 63.1
Duzib268G1565 Durio zibethinus HOM05D006334 ORTHO05D008320 1.0e-36 158.3 181 59.1
FAN25G1013 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.0e-36 158.3 192 54.2
Gohir.A01G075500 Gossypium hirsutum HOM05D006334 ORTHO05D008320 1.0e-36 158.3 177 59.9
QL08p012752 Quercus lobata HOM05D006334 ORTHO05D008320 1.0e-36 158.3 172 57.0
VMungo1080G0184 Vigna mungo HOM05D006334 ORTHO05D008320 1.0e-36 158.3 181 59.1
MD11G1224700 Malus domestica HOM05D006334 ORTHO05D008320 1.3e-36 157.9 175 56.0
Cc05_g13330 Coffea canephora HOM05D006334 ORTHO05D008320 1.7e-36 157.5 119 63.0
Glyma.13G288200 Glycine max HOM05D006334 ORTHO05D008320 1.7e-36 157.5 181 60.8
Medtr2g083200 Medicago truncatula HOM05D006334 ORTHO05D008320 1.7e-36 157.5 185 54.6
Atru.chr2.3229 Acer truncatum HOM05D006334 ORTHO05D008320 2.3e-36 157.1 123 61.0
FAN11G3716 Fragaria x ananassa HOM05D006334 ORTHO05D008320 3.0e-36 156.8 303 45.5
THA.LOC104812531 Tarenaya hassleriana HOM05D006334 ORTHO05D008320 3.0e-36 156.8 179 59.8
AUR62005409 Chenopodium quinoa HOM05D006334 ORTHO05D008320 5.1e-36 156.0 171 56.1
Haze_24344 Corylus avellana HOM05D003220 ORTHO05D003944 5.1e-36 156.0 123 61.0
Sed0009538 Sechium edule HOM05D006334 ORTHO05D008320 5.1e-36 156.0 127 60.6
Sabra16G0284400 Salix brachista HOM05D006334 ORTHO05D008320 6.6e-36 155.6 123 60.2
Aa31LG5G10300 Aethionema arabicum HOM05D006334 ORTHO05D008320 8.6e-36 155.2 179 60.3
MSTRG.27096 Avicennia marina HOM05D006334 ORTHO05D008320 8.6e-36 155.2 139 58.3
FvH4_3g21950 Fragaria vesca HOM05D006334 ORTHO05D008320 1.5e-35 154.5 303 43.9
Ciclev10009059m.g Citrus clementina HOM05D006334 ORTHO05D008320 2.5e-35 153.7 175 57.1
RcHm_v2.0_Chr5g0037801 Rosa chinensis HOM05D006334 ORTHO05D008320 2.5e-35 153.7 192 47.9
Glyma.12G213500 Glycine max HOM05D006334 ORTHO05D008320 4.3e-35 152.9 181 63.0
Lalb_Chr24g0400251 Lupinus albus HOM05D006334 ORTHO05D008320 7.3e-35 152.1 123 59.3
Peaxi162Scf00450g00858 Petunia axillaris HOM05D006334 ORTHO05D008320 1.2e-34 151.4 136 56.6
C01p23260 Brassica napus HOM05D006334 ORTHO05D008320 2.1e-34 150.6 123 61.0
Carub.0007s1372 Capsella rubella HOM05D006334 ORTHO05D008320 2.1e-34 150.6 124 60.5
Carub.0008s0614 Capsella rubella HOM05D006334 ORTHO05D008320 2.1e-34 150.6 124 60.5
HPP92_014117 Vanilla planifolia HOM05D006334 ORTHO05D008320 2.1e-34 150.6 193 54.9
BcaNung03057 Brassica carinata HOM05D006334 ORTHO05D008320 2.8e-34 150.2 123 61.0
unitig_748.g7233 Utricularia gibba HOM05D006334 ORTHO05D008320 2.8e-34 150.2 198 59.6
AL7G25680 Arabidopsis lyrata HOM05D006334 ORTHO05D008320 4.7e-34 149.4 123 61.0
AT4G27120 Arabidopsis thaliana HOM05D006334 ORTHO05D008320 4.7e-34 149.4 123 61.0
A03p57090 Brassica napus HOM05D006334 ORTHO05D008320 4.7e-34 149.4 123 61.0
BolC1t02259H Brassica oleracea HOM05D006334 ORTHO05D008320 4.7e-34 149.4 123 61.0
BolC7t46013H Brassica oleracea HOM05D006334 ORTHO05D001501 4.7e-34 149.4 123 61.0
BraA01t01781Z Brassica rapa HOM05D006334 ORTHO05D008320 4.7e-34 149.4 123 61.0
BraA03t14779Z Brassica rapa HOM05D006334 ORTHO05D008320 4.7e-34 149.4 123 61.0
Sp7g25090 Schrenkiella parvula HOM05D006334 ORTHO05D008320 4.7e-34 149.4 123 61.0
BcaC06g32710 Brassica carinata HOM05D006334 ORTHO05D008320 1.1e-33 148.3 123 60.2
A01p18260 Brassica napus HOM05D006334 ORTHO05D008320 1.1e-33 148.3 123 60.2
C07p54970 Brassica napus HOM05D006334 ORTHO05D008320 1.1e-33 148.3 123 60.2
CARHR234770 Cardamine hirsuta HOM05D006334 ORTHO05D008320 1.1e-33 148.3 123 60.2
Thhalv10025846m.g Eutrema salsugineum HOM05D006334 ORTHO05D008320 1.1e-33 148.3 123 60.2
MD03G1210000 Malus domestica HOM05D006334 ORTHO05D008320 3.1e-33 146.7 193 51.3
Actinidia35324 Actinidia chinensis HOM05D006334 ORTHO05D008320 8.4e-31 138.7 129 62.8
RhsimUnG0252800 Rhododendron simsii HOM05D006334 ORTHO05D008320 8.4e-31 138.7 229 45.9
EL10Ac4g07940 Beta vulgaris HOM05D006334 ORTHO05D008320 5.4e-30 136.0 222 48.6
Actinidia10714 Actinidia chinensis HOM05D006334 ORTHO05D008320 5.6e-27 125.9 88 69.3
Cre02.g101100 Chlamydomonas reinhardtii HOM05D006334 ORTHO05D008320 3.4e-24 116.7 118 50.0
FAN21G3458 Fragaria x ananassa HOM05D006334 ORTHO05D008320 4.9e-23 112.8 124 51.6
Haze_27349 Corylus avellana HOM05D006334 ORTHO05D008320 2.8e-18 97.1 127 37.0
Oeu032444.1 Olea europaea HOM05D006334 ORTHO05D008320 3.1e-17 93.6 101 59.4
FAN16G1435 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.2e-13 81.6 53 71.7
ATR0697G296 Amborella trichopoda HOM05D006334 ORTHO05D008320 6.0e-13 79.3 118 51.7
Cpa.g.sc97.53 Carica papaya HOM05D006334 ORTHO05D008320 2.3e-12 77.4 53 67.9
Cpa.g.sc97.55 Carica papaya HOM05D006334 ORTHO05D008320 8.7e-12 75.5 115 54.8
BcaC09g50615 Brassica carinata HOM05D006334 ORTHO05D008320 1.1e-09 68.6 60 60.0


User provided reference genes

Program Settings