Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g8660 Chara braunii HOM05D003549 ORTHO05D004223 1.8e-29 132.1 77 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1875 Anthoceros agrestis HOM05D003549 ORTHO05D004223 6.3e-14 80.5 65 67.7
Mapoly0025s0126 Marchantia polymorpha HOM05D003549 ORTHO05D004223 1.2e-12 76.3 69 56.5
SMO139G0002 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 2.9e-11 71.6 70 61.4
SMO145G0027 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 2.9e-11 71.6 70 61.4
Nitab4.5_0000852g0140 Nicotiana tabacum HOM05D003549 ORTHO05D004223 5.0e-11 70.9 71 60.6
Nitab4.5_0003857g0060 Nicotiana tabacum HOM05D003549 ORTHO05D004223 5.0e-11 70.9 71 60.6
Nn8g39923 Nelumbo nucifera HOM05D003549 ORTHO05D004223 1.4e-10 69.3 71 63.4
SGA_v2.0_scaffold90G27958 Striga asiatica HOM05D000215 ORTHO05D003454 1.4e-10 69.3 71 54.9
SalBow2G1727 Salvia bowleyana HOM05D003549 ORTHO05D004223 1.9e-10 68.9 71 56.3
Dinv33505 Davidia involucrata HOM05D003549 ORTHO05D004223 5.5e-10 67.4 65 58.5
Peaxi162Scf00017g02716 Petunia axillaris HOM05D003549 ORTHO05D004223 5.5e-10 67.4 71 59.2
CiPaw.12G025200 Carya illinoinensis HOM05D003549 ORTHO05D004223 9.4e-10 66.6 66 62.1
Cc04_g12860 Coffea canephora HOM05D003549 ORTHO05D004223 9.4e-10 66.6 66 62.1
Solyc03g114170.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 9.4e-10 66.6 67 61.2
PGSC0003DMG400024492 Solanum tuberosum HOM05D003549 ORTHO05D004223 9.4e-10 66.6 67 61.2
Aqoxy3G00995 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 1.6e-09 65.9 72 58.3
PSO063G4497 Papaver somniferum HOM05D003549 ORTHO05D004223 1.6e-09 65.9 67 58.2
PSO832G2372 Papaver somniferum HOM05D003549 ORTHO05D004223 1.6e-09 65.9 67 61.2
GSVIVG01032498001 Vitis vinifera HOM05D003549 ORTHO05D004223 1.6e-09 65.9 64 65.6
Sopen03g033240 Solanum pennellii HOM05D003549 ORTHO05D004223 2.7e-09 65.1 67 59.7
TAR629G2438 Trochodendron aralioides HOM05D003549 ORTHO05D004223 2.7e-09 65.1 71 56.3
BcaB03g15337 Brassica carinata HOM05D003549 ORTHO05D004223 4.6e-09 64.3 62 64.5
QL02p076964 Quercus lobata HOM05D003549 ORTHO05D004223 4.6e-09 64.3 69 59.4
Zm00001eb332940 Zea mays HOM05D003549 ORTHO05D004223 4.6e-09 64.3 67 61.2
Ca_16195_v3 Cicer arietinum L. HOM05D003549 ORTHO05D004223 6.1e-09 63.9 67 62.7
Duzib084G0774 Durio zibethinus HOM05D003549 ORTHO05D004223 6.1e-09 63.9 70 60.0
RcHm_v2.0_Chr7g0184521 Rosa chinensis HOM05D003549 ORTHO05D004223 6.1e-09 63.9 71 57.7
RcHm_v2.0_Chr7g0193821 Rosa chinensis HOM05D003549 ORTHO05D004223 6.1e-09 63.9 71 57.7
CiPaw.11G028500 Carya illinoinensis HOM05D003549 ORTHO05D004223 7.9e-09 63.5 71 60.6
Rhsim12G0163400 Rhododendron simsii HOM05D003549 ORTHO05D004223 7.9e-09 63.5 71 54.9
Phvul.001G059000 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 1.4e-08 62.8 67 62.7
Psat5g114160 Pisum sativum HOM05D003549 ORTHO05D004223 1.4e-08 62.8 71 59.2
Hund03159 Selenicereus undatus HOM05D003549 ORTHO05D004223 1.4e-08 62.8 67 61.2
HanXRQChr16g0517241 Helianthus annuus HOM05D003549 ORTHO05D004223 2.3e-08 62.0 66 60.6
Lalb_Chr08g0236401 Lupinus albus HOM05D003549 ORTHO05D004223 2.3e-08 62.0 67 61.2
TWI15G0885 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.3e-08 62.0 67 58.2
Lj6g0023924 Lotus japonicus HOM05D003549 ORTHO05D004223 3.0e-08 61.6 67 61.2
Sed0001837 Sechium edule HOM05D003549 ORTHO05D004223 3.0e-08 61.6 71 54.9
PSO017G2368 Papaver somniferum HOM05D003549 ORTHO05D004223 3.9e-08 61.2 63 58.7
TWI81G0050 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 3.9e-08 61.2 67 58.2
TWI81G1057 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 3.9e-08 61.2 67 58.2
Haze_07495 Corylus avellana HOM05D003549 ORTHO05D004223 5.1e-08 60.8 70 58.6
ECA232G0606 Erigeron canadensis HOM05D003549 ORTHO05D004223 5.1e-08 60.8 62 62.9
Potri.001G334600 Populus trichocarpa HOM05D003549 ORTHO05D004223 5.1e-08 60.8 73 57.5
BcaB05g23601 Brassica carinata HOM05D003549 ORTHO05D004223 6.7e-08 60.5 62 56.5
Glyma.17G198800 Glycine max HOM05D003549 ORTHO05D004223 6.7e-08 60.5 67 59.7
Hma1.2p1_0802F.1_g220520 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 6.7e-08 60.5 58 60.3
TAR371G0468 Trochodendron aralioides HOM05D003549 ORTHO05D004223 6.7e-08 60.5 70 58.6
ClCG01G013030 Citrullus lanatus HOM05D003549 ORTHO05D004223 8.8e-08 60.1 71 60.6
FAN04G1549 Fragaria x ananassa HOM05D003549 ORTHO05D004223 8.8e-08 60.1 71 54.9
FAN08G2999 Fragaria x ananassa HOM05D003549 ORTHO05D004223 8.8e-08 60.1 71 54.9
FAN13G2761 Fragaria x ananassa HOM05D003549 ORTHO05D004223 8.8e-08 60.1 71 54.9
Glyma.06G183700 Glycine max HOM05D003549 ORTHO05D004223 8.8e-08 60.1 71 59.2
THA.LOC109116495 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 8.8e-08 60.1 70 57.1
Glyma.04G181200 Glycine max HOM05D003549 ORTHO05D004223 1.1e-07 59.7 71 59.2
Lsat_1_v5_gn_4_74920 Lactuca sativa HOM05D003549 ORTHO05D004223 1.1e-07 59.7 65 60.0
PSO478G4862 Papaver somniferum HOM05D003549 ORTHO05D004223 1.1e-07 59.7 63 57.1
Duzib205G0517 Durio zibethinus HOM05D003549 ORTHO05D004223 1.5e-07 59.3 66 57.6
Glyma.14G134200 Glycine max HOM05D003549 ORTHO05D004223 1.5e-07 59.3 67 59.7
Lj1g0007079 Lotus japonicus HOM05D003549 ORTHO05D004223 1.5e-07 59.3 67 59.7
MBI15_g31119_MAGBIO Magnolia biondii HOM05D003549 ORTHO05D004223 1.5e-07 59.3 71 60.6
MD06G1177000 Malus domestica HOM05D003549 ORTHO05D004223 2.0e-07 58.9 66 57.6
Os01g0273000 Oryza sativa ssp. japonica HOM05D003549 ORTHO05D004223 2.0e-07 58.9 67 56.7
A07p32720 Brassica napus HOM05D003549 ORTHO05D004223 2.6e-07 58.5 59 69.5
C06p38930 Brassica napus HOM05D003549 ORTHO05D004223 2.6e-07 58.5 59 69.5
BolC6t38985H Brassica oleracea HOM05D003549 ORTHO05D004223 2.6e-07 58.5 59 69.5
BraA07t30898Z Brassica rapa HOM05D003549 ORTHO05D004223 2.6e-07 58.5 59 69.5
CsaV3_1G008390 Cucumis sativus L. HOM05D003549 ORTHO05D004223 2.6e-07 58.5 71 59.2
Medtr3g078130 Medicago truncatula HOM05D003549 ORTHO05D004223 3.3e-07 58.2 71 56.3
Oeu000929.1 Olea europaea HOM05D003549 ORTHO05D004223 3.3e-07 58.2 71 54.9
TWI60G0590 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 3.3e-07 58.2 60 56.7
Aa31LG2G1940 Aethionema arabicum HOM05D003549 ORTHO05D004223 4.4e-07 57.8 66 63.6
Migut.D01775 Erythranthe guttata HOM05D003549 ORTHO05D004223 4.4e-07 57.8 71 53.5
FvH4_5g05150 Fragaria vesca HOM05D003549 ORTHO05D004223 4.4e-07 57.8 71 53.5
FAN18G4010 Fragaria x ananassa HOM05D003549 ORTHO05D004223 4.4e-07 57.8 71 53.5
TAR622G0024 Trochodendron aralioides HOM05D003549 ORTHO05D004223 4.4e-07 57.8 71 59.2
TAR622G1417 Trochodendron aralioides HOM05D003549 ORTHO05D004223 4.4e-07 57.8 71 59.2
unitig_26.g9627 Utricularia gibba HOM05D000915 ORTHO05D001662 4.4e-07 57.8 69 58.0
DCAR_021678 Daucus carota HOM05D003549 ORTHO05D004223 5.7e-07 57.4 60 65.0
Dinv09155 Davidia involucrata HOM05D003549 ORTHO05D004223 7.4e-07 57.0 64 56.2
CAN.G628.73 Capsicum annuum HOM05D003549 ORTHO05D004223 1.3e-06 56.2 71 54.9
MD14G1183200 Malus domestica HOM05D003549 ORTHO05D004223 1.3e-06 56.2 66 56.1
Gohir.A07G060300 Gossypium hirsutum HOM05D003549 ORTHO05D004223 1.7e-06 55.8 72 52.8
RcHm_v2.0_Chr2g0170951 Rosa chinensis HOM05D003549 ORTHO05D004223 1.7e-06 55.8 60 61.7
Hma1.2p1_0176F.1_g077660 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 2.2e-06 55.5 67 58.2
PRCOL_00000142 Prasinoderma coloniale HOM05D003549 ORTHO05D004223 2.2e-06 55.5 70 50.0
HPP92_002194 Vanilla planifolia HOM05D003549 ORTHO05D004223 2.2e-06 55.5 73 53.4
AagrBONN_evm.TU.Sc2ySwM_368.737 Anthoceros agrestis HOM05D003549 ORTHO05D004223 2.8e-06 55.1 86 47.7
ClCG08G009420 Citrullus lanatus HOM05D003549 ORTHO05D004223 2.8e-06 55.1 71 59.2
MELO3C026538.2 Cucumis melo HOM05D003549 ORTHO05D004223 2.8e-06 55.1 71 59.2
CsaV3_6G031560 Cucumis sativus L. HOM05D003549 ORTHO05D004223 2.8e-06 55.1 71 59.2
Phvul.009G179900 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 2.8e-06 55.1 67 56.7
Potri.017G066900 Populus trichocarpa HOM05D003549 ORTHO05D004223 2.8e-06 55.1 67 58.2
SalBow5G5409 Salvia bowleyana HOM05D003549 ORTHO05D004223 2.8e-06 55.1 68 55.9
Sc04g0001880 Simmondsia chinensis HOM05D003549 ORTHO05D004223 2.8e-06 55.1 76 53.9
Actinidia33056 Actinidia chinensis HOM05D000215 ORTHO05D003454 3.7e-06 54.7 73 54.8
Prupe.5G175700 Prunus persica HOM05D003549 ORTHO05D004223 3.7e-06 54.7 71 54.9
Sed0023520 Sechium edule HOM05D003549 ORTHO05D004223 3.7e-06 54.7 63 58.7
Prupe.3G282400 Prunus persica HOM05D003549 ORTHO05D004223 4.8e-06 54.3 64 56.2
AL2G18990 Arabidopsis lyrata HOM05D003549 ORTHO05D004223 6.3e-06 53.9 71 56.3
Ciclev10023184m.g Citrus clementina HOM05D003549 ORTHO05D004223 6.3e-06 53.9 70 55.7
THA.LOC104805767 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 6.3e-06 53.9 71 54.9
Cpa.g.sc124.38 Carica papaya HOM05D003549 ORTHO05D004223 8.2e-06 53.5 71 53.5


User provided reference genes

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