Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 1.4e-209 732.6 345 100.0
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.8e-132 476.5 314 68.2
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 3.9e-132 475.3 320 66.6
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 2.5e-131 472.6 315 68.3
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 5.7e-131 471.5 315 68.3
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 5.7e-131 471.5 315 68.3
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 1.6e-130 469.9 316 67.1
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 1.6e-130 469.9 316 67.1
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 4.8e-130 468.4 315 66.0
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 6.3e-130 468.0 328 65.5
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 8.2e-130 467.6 318 67.3
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 8.2e-130 467.6 316 66.8
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 8.2e-130 467.6 323 66.6
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 1.1e-129 467.2 312 67.6
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.1e-129 467.2 327 65.1
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 1.8e-129 466.5 317 67.8
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 3.1e-129 465.7 315 67.0
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 3.1e-129 465.7 323 65.9
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 3.1e-129 465.7 325 66.2
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 4.1e-129 465.3 313 67.7
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 4.1e-129 465.3 312 67.3
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 6.9e-129 464.5 325 65.8
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 6.9e-129 464.5 335 64.2
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 6.9e-129 464.5 315 65.7
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 6.9e-129 464.5 315 67.3
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 1.2e-128 463.8 325 65.5
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 1.5e-128 463.4 333 64.3
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 2.0e-128 463.0 315 67.0
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 2.6e-128 462.6 323 65.3
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.6e-128 462.6 315 66.7
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 4.5e-128 461.8 315 65.7
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 4.5e-128 461.8 313 66.8
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 4.5e-128 461.8 315 65.7
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 5.9e-128 461.5 328 64.6
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 1.3e-127 460.3 314 66.2
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 1.3e-127 460.3 313 67.4
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 1.3e-127 460.3 318 64.5
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 1.3e-127 460.3 313 66.8
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 1.3e-127 460.3 315 65.7
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 1.3e-127 460.3 337 62.9
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.7e-127 459.9 313 66.8
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 1.7e-127 459.9 325 65.2
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 1.7e-127 459.9 315 65.7
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 2.2e-127 459.5 315 66.7
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 2.2e-127 459.5 315 66.7
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 2.9e-127 459.1 325 65.8
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 2.9e-127 459.1 335 63.6
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 2.9e-127 459.1 335 63.6
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 2.9e-127 459.1 315 66.7
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 6.5e-127 458.0 313 66.5
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.1e-126 457.2 315 65.1
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 1.4e-126 456.8 315 64.8
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 1.4e-126 456.8 316 65.5
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.9e-126 456.4 319 64.9
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 2.5e-126 456.1 315 65.4
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 2.5e-126 456.1 315 65.7
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 2.5e-126 456.1 315 64.4
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 3.2e-126 455.7 313 65.8
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 3.2e-126 455.7 327 64.8
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 4.2e-126 455.3 319 64.6
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 4.2e-126 455.3 315 65.4
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 5.5e-126 454.9 318 66.0
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 5.5e-126 454.9 319 65.2
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 7.2e-126 454.5 320 65.0
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 7.2e-126 454.5 317 65.6
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 1.2e-125 453.8 337 61.7
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 1.2e-125 453.8 331 63.7
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 1.2e-125 453.8 339 62.5
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 1.6e-125 453.4 315 64.4
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.6e-125 453.4 316 64.9
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 1.6e-125 453.4 312 66.0
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 2.1e-125 453.0 315 65.1
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 2.7e-125 452.6 336 62.8
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 3.6e-125 452.2 313 65.5
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 3.6e-125 452.2 314 65.0
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 7.9e-125 451.1 315 65.4
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 1.3e-124 450.3 313 64.9
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 1.8e-124 449.9 314 65.6
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 3.0e-124 449.1 323 63.8
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 3.0e-124 449.1 364 59.1
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 6.7e-124 448.0 315 64.8
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 5.7e-123 444.9 331 63.4
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 9.7e-123 444.1 338 61.8
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 1.3e-122 443.7 315 65.1
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 6.3e-122 441.4 320 63.4
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 1.2e-120 437.2 334 62.0
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 2.0e-115 419.9 315 62.2
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 3.3e-115 419.1 319 61.8
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 3.3e-115 419.1 286 65.0
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 1.3e-114 417.2 287 65.5
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 4.8e-114 415.2 283 66.8
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.1e-113 414.1 320 61.6
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 2.6e-112 409.5 346 58.4
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 4.5e-112 408.7 337 58.2
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 6.5e-111 404.8 323 58.8
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 9.7e-107 391.0 313 58.1
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 2.9e-95 352.8 246 64.6
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 3.5e-88 329.3 359 46.5
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.4e-81 307.4 348 43.4
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 1.5e-78 297.4 263 57.0
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 3.6e-77 292.7 184 70.7
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 2.3e-76 290.0 480 36.2
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.0e-76 289.7 277 52.0
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.0e-75 287.0 321 45.2
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 9.8e-75 284.6 318 44.0
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 1.2e-69 267.7 228 55.7
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 3.6e-53 213.0 362 37.0
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 4.0e-52 209.5 158 58.9
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 3.0e-47 193.4 123 67.5
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 7.6e-43 178.7 209 45.5
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.3e-42 177.9 156 55.8
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 1.2e-40 171.4 129 61.2
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 8.7e-39 165.2 194 42.8
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 3.2e-33 146.7 205 40.0
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 1.1e-22 111.7 79 60.8
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 1.1e-14 85.1 57 63.2
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.3e-10 71.6 85 43.5
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 1.1e-09 68.6 74 48.6
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 5.5e-09 66.2 122 35.2
DCAR_018324 Daucus carota HOM05D000363 ORTHO05D000236 3.6e-08 63.5 100 37.0
Sed0002641 Sechium edule HOM05D000363 ORTHO05D000236 1.4e-07 61.6 103 35.0
arahy.Tifrunner.gnm1.ann1.A21TQ1 Arachis hypogaea HOM05D000363 ORTHO05D000236 1.8e-07 61.2 112 33.9
arahy.Tifrunner.gnm1.ann1.FD543A Arachis hypogaea HOM05D000363 ORTHO05D000236 2.3e-07 60.8 109 34.9
AagrBONN_evm.TU.Sc2ySwM_362.347 Anthoceros agrestis HOM05D000363 ORTHO05D031126 3.0e-07 60.5 132 32.6
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 5.1e-07 59.7 33 75.8
Aqoxy2G02901 Aquilegia oxysepala HOM05D000363 ORTHO05D000236 6.7e-07 59.3 126 32.5
CANSAT11G2375 Cannabis sativa HOM05D000363 ORTHO05D000236 2.5e-06 57.4 126 32.5
QL12p028134 Quercus lobata HOM05D000363 ORTHO05D000236 2.5e-06 57.4 108 33.3
Sp7g09530 Schrenkiella parvula HOM05D007239 ORTHO05D003473 2.5e-06 57.4 115 33.0
Psat5g271080 Pisum sativum HOM05D000363 ORTHO05D000236 3.3e-06 57.0 125 30.4
Potri.002G202700 Populus trichocarpa HOM05D000363 ORTHO05D000236 3.3e-06 57.0 99 34.3
AagrBONN_evm.TU.Sc2ySwM_362.1142 Anthoceros agrestis HOM05D004169 ORTHO05D004942 5.7e-06 56.2 170 26.5
MELO3C017947.2 Cucumis melo HOM05D000363 ORTHO05D000236 5.7e-06 56.2 125 30.4
MELO3C017952.2 Cucumis melo HOM05D000363 ORTHO05D000236 5.7e-06 56.2 144 31.2


User provided reference genes

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