Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 8.4e-105 383.6 186 100.0
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 6.8e-22 108.2 75 65.3
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 5.7e-21 105.1 84 51.2
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 5.7e-21 105.1 80 57.5
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 7.5e-21 104.8 88 51.1
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 9.8e-21 104.4 86 52.3
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 1.3e-20 104.0 84 53.6
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 1.3e-20 104.0 84 52.4
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 1.7e-20 103.6 84 53.6
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 2.8e-20 102.8 80 52.5
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 2.8e-20 102.8 84 52.4
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 3.7e-20 102.4 99 44.4
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 3.7e-20 102.4 80 53.8
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.7e-20 102.4 80 53.8
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.7e-20 102.4 80 53.8
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.7e-20 102.4 80 53.8
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 3.7e-20 102.4 88 48.9
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 3.7e-20 102.4 88 48.9
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 4.9e-20 102.1 81 51.9
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 4.9e-20 102.1 84 51.2
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 6.3e-20 101.7 84 50.0
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 8.3e-20 101.3 80 52.5
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 8.3e-20 101.3 80 52.5
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 8.3e-20 101.3 80 52.5
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 8.3e-20 101.3 80 52.5
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 8.3e-20 101.3 84 51.2
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 8.3e-20 101.3 84 53.6
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 8.3e-20 101.3 84 51.2
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 8.3e-20 101.3 80 51.2
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 8.3e-20 101.3 89 48.3
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 1.1e-19 100.9 80 51.2
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.1e-19 100.9 84 51.2
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 1.1e-19 100.9 84 51.2
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.1e-19 100.9 88 50.0
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 1.1e-19 100.9 91 51.6
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 1.1e-19 100.9 84 51.2
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 1.4e-19 100.5 80 51.2
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 1.4e-19 100.5 84 50.0
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.4e-19 100.5 84 51.2
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 1.4e-19 100.5 81 49.4
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.4e-19 100.5 88 50.0
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 1.4e-19 100.5 80 50.0
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 1.4e-19 100.5 84 50.0
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.4e-19 100.5 91 50.5
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.4e-19 100.5 91 50.5
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.4e-19 100.5 91 50.5
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 1.8e-19 100.1 84 50.0
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 1.8e-19 100.1 84 50.0
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 1.8e-19 100.1 84 48.8
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 1.8e-19 100.1 88 47.7
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.8e-19 100.1 84 51.2
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 1.8e-19 100.1 80 52.5
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 1.8e-19 100.1 81 50.6
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 1.8e-19 100.1 84 48.8
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 1.8e-19 100.1 84 48.8
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 2.4e-19 99.8 84 50.0
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 2.4e-19 99.8 81 50.6
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 2.4e-19 99.8 81 50.6
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 3.1e-19 99.4 88 50.0
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 3.1e-19 99.4 81 48.1
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 3.1e-19 99.4 80 51.2
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 4.1e-19 99.0 81 48.1
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 4.1e-19 99.0 80 51.2
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 4.1e-19 99.0 84 48.8
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 5.4e-19 98.6 84 50.0
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 7.0e-19 98.2 80 50.0
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 7.0e-19 98.2 80 52.5
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 7.0e-19 98.2 80 50.0
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 7.0e-19 98.2 84 48.8
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 9.2e-19 97.8 81 46.9
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 9.2e-19 97.8 80 51.2
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 9.2e-19 97.8 88 51.1
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 9.2e-19 97.8 91 50.5
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 1.2e-18 97.4 80 48.8
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 1.6e-18 97.1 80 51.2
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 1.6e-18 97.1 90 48.9
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 2.7e-18 96.3 77 49.4
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 2.7e-18 96.3 76 52.6
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 3.5e-18 95.9 91 49.5
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 3.5e-18 95.9 84 48.8
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 4.5e-18 95.5 84 48.8
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 4.5e-18 95.5 84 48.8
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 4.5e-18 95.5 90 48.9
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 4.5e-18 95.5 90 48.9
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 4.5e-18 95.5 84 50.0
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 4.5e-18 95.5 88 47.7
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 5.9e-18 95.1 80 50.0
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 5.9e-18 95.1 80 50.0
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 5.9e-18 95.1 88 48.9
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 7.8e-18 94.7 80 50.0
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 7.8e-18 94.7 80 50.0
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 1.0e-17 94.4 88 47.7
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 1.0e-17 94.4 88 47.7
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 1.0e-17 94.4 80 50.0
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 1.0e-17 94.4 88 47.7
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 1.0e-17 94.4 80 50.0
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 1.0e-17 94.4 80 50.0
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 1.0e-17 94.4 80 50.0
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 1.0e-17 94.4 88 47.7
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 1.0e-17 94.4 80 50.0
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 1.7e-17 93.6 77 57.1
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 1.7e-17 93.6 76 48.7
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 2.9e-17 92.8 75 53.3
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 3.9e-17 92.4 92 45.7
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 6.6e-17 91.7 90 45.6
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 8.6e-17 91.3 84 46.4
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 1.9e-16 90.1 80 51.2
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 3.3e-16 89.4 80 48.8
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 7.3e-16 88.2 89 44.9
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 1.6e-15 87.0 80 47.5
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 2.1e-15 86.7 80 47.5
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 3.6e-15 85.9 69 47.8
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 3.6e-15 85.9 80 47.5
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 5.2e-14 82.0 69 46.4
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 5.8e-13 78.6 83 42.2
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 5.8e-13 78.6 81 44.4
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 7.5e-13 78.2 84 44.0
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 3.7e-12 75.9 84 39.3
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 3.7e-12 75.9 73 42.5
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 7.0e-11 71.6 81 39.5
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 7.8e-10 68.2 80 41.2
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 2.3e-09 66.6 70 44.3
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 2.3e-09 66.6 70 44.3
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 1.1e-08 64.3 69 42.0
AagrBONN_evm.TU.Sc2ySwM_228.1161 Anthoceros agrestis HOM05D005988 ORTHO05D007392 6.8e-06 55.1 81 40.7


User provided reference genes

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